Caretta caretta (Loggerhead turtle): 125637652
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Entry
125637652 CDS
T09292
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125637652 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125637652 (LMO7)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125637652 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_6
DUF6288
Motif
Other DBs
NCBI-GeneID:
125637652
NCBI-ProteinID:
XP_048708355
LinkDB
All DBs
Position
1:78838735..79021570
Genome browser
AA seq
1727 aa
AA seq
DB search
MEGREDAEGSCDVAFAEAQRWVEAVTGKSFGTKDFRAALENGVLLCDLINKIKPGIIKKI
NRLSTPIAGLDNINVFLKACENIGLKEAQLFHPGDLQDLSSRVTVKQEETNRRLKNVLIT
LYWLGRKAKNNPGYNGPNLNLKAFEKLLGQALTRALEESSSLKSSGRDSGYGDIWYIDRG
EAFSPSTSHKRDDSFDSLDSFGSRSSTSFSSDITLKGGSEGCESDTDSELPYKMHDSGKD
DMSYRRTAVIEPKPATEFNRFLPCKTKQASYMPAPLRKKRTEKNEDNRRSWASPVFTEPD
GTFSSNQRRQRHLDPKEESKPKVNISSKFSGYSDDEEEKAVGIPNIEKDDLYVRKLNSAV
SNPMVSFDKFLPKFWTPEEELHWKKIKKGSSSKPWYKDLQGFSRRKSDSEDEDSVYKQSN
AKLTADYVGESLSHIAEGGITYASDQRSQFSLLQTLQKYSDDYLSSEMKTKIDPTSGPRV
ITCRKNIYFTPGWNQRETLNGDPYPDLENDDLFVRKIGTFHMNPIALQAFEYFRKSSEQE
PLLEGEIILQPREDQPVIPDLEKDDMIVRKVQTHKKEVPLSGAPDKYHPALFPDPWSLPP
EIQSKFLCLLDKTNPTEDEKNGGRVLSPSLQQKKDDMLTRKIESWKVGSVLQPVSFTPGP
CSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEDGSKSLNDVSADEAQVLRQVRYEE
LQKIKSKLQEQDQKWQDDLAKWKNRRKSFTSDLQKKKEEREEIERRASETSERNSKSLKE
MQQDRENRDQGSYSDMQQKSERTRMYSSDDVFSEEKHPSRPSVAKDYLVEKDASYSFKKN
EKSYAAQTNKENSQKLEIYATAETQIPSKSLLEEQSSVPLSTHHSVNAQMGSARVSASLP
RSSQKTDTSRLTSVVTPRPFSVHSRGISSLPRSFTVDDVQKYNGEVDGAKRSQTLLTSYS
FSTLEAGPLLSADAMTSGGEEEKESIKRKESPTLRASATSQYQDAVSPDLKSEYYTHPDP
VTVAASAEIRNLPESEVSVSQDKYSEMRISINQRSGNSRNFGFTTNWKPSGVFVQTIEGS
TADLGQLQVDDEIIAVNGTRVSQMDHNQWEEAMANALETGNLVMDVRRYGKNDWGKDQPS
LPYVRHKILNLTSMATNIVGTPENKWIEATSGDHNSTNSSNISAKRDFFYSLQNSDAGAK
VINGMQADMSSHEQKESEPISLKNLKRRSQFFEQGGSEPAVSDLPVPSINAPSRWTWDQE
EERKRQEKWQKEQERLLQEKYKREQEKLRKEWLQAQQEAERESSKYLDEEPTVLTFNTVS
VPAHAPPISRWGRNVGEDADDLEGGRRHEWGEPQQNEEEKEMERRRLQEERRLQEEKALH
LEQKRKAQELELEREQKEKEQQYAEEQKQRAEAEEQKRRMEKEREIPIQMPQYRRHYDHY
EVSKNFEDPSGHFLADRNKSRSTSELDDYPRSQNGTNNKYLEKSWNVSDSQKGSQKEPAQ
SSAEIERQHILQEMRKKTSLHTDNSWIRQRSSSVHKDPVNLHKNTMKRGESLDNLDSSRT
SSWRSPLWTNQSASSTSLSSNQDFSRSAAPLVSTSNRAYMRTPSSSVAPPSASSGRSATS
SHSFPSAPSSVPRAQSPTSASRSGAQQRNRSVSGKKICSYCNNVLGKGAAMIIESLGLCY
HLHCFKCTACACDLGGSHSGAEVRIRNNELFCNDCYVKFKTGQPTSM
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagagaggatgctgagggcagctgcgatgtagcttttgctgaagctcagaga
tgggtggaggcagtcactgggaaaagttttggaaccaaagattttcgagcagctttagaa
aacggagtcctgttgtgcgatttgattaacaagatcaaacctggcatcattaagaagatc
aatcgtctgtctactccaatagctggtttggataatataaatgtttttctgaaagcttgt
gaaaatattggattgaaagaagctcagctctttcatcctggggatcttcaggatttgtcc
agtcgagttactgtcaagcaagaagagaccaatagaagactgaaaaatgttttgattaca
ttatactggctggggaggaaagcaaaaaacaaccctggttacaatggtccaaaccttaac
cttaaagcatttgagaaattactaggacaagctctgaccagggccctcgaagaatccagc
agtctgaaaagcagtggcagggatagcgggtacggtgatatttggtacattgaccgtgga
gaagcattttcaccttccactagccataaaagagacgattctttcgatagcctggactcc
tttggttcaagatcctccacaagcttttcatcagatataaccttgaagggtggcagtgaa
ggttgcgaaagtgacacggactctgaactgccttacaaaatgcatgattctggcaaagat
gacatgtcatatcgcaggactgctgtgattgaaccaaaacctgctacagagttcaatcgt
ttcttaccctgcaaaaccaaacaggcatcatatatgccagcaccactcagaaaaaaaagg
acagagaagaatgaggacaacagaagaagctgggcaagtcctgtcttcactgagccagat
ggaacattttcaagtaaccagaggaggcagaggcatttggaccctaaagaggaaagcaag
ccaaaagttaacatttcttcaaaattctccggctattctgatgatgaggaggaaaaggca
gtaggcatcccaaacattgaaaaagatgatctctatgttcgcaaactaaactctgcagtt
tcaaacccaatggtttcttttgataagtttctacctaaattttggactccagaagaagaa
ttgcattggaaaaaaatcaaaaaaggatcctcttccaaaccatggtataaggaccttcag
ggattcagtagaaggaagtctgattctgaggatgaagattcagtctataaacaaagcaat
gccaaactgactgctgattatgtgggggaatcattgtcccacattgcagaagggggaatc
acgtacgcctctgatcaacgcagtcagttttcattacttcagaccctccaaaaatactct
gatgactacttgtcttctgaaatgaagaccaaaattgatcctacttctggccctagggtc
ataacatgcagaaagaatatttattttacgccaggatggaaccagagggaaactctgaat
ggagacccatatccagacttggaaaatgacgatttgtttgttcggaagattgggactttc
cacatgaatccaattgctctccaagcttttgaatactttagaaaatcctctgagcaagaa
cctcttttagagggtgaaataattctgcaacccagagaggaccaacctgttattccagac
ttagaaaaagatgacatgattgttcgtaaagtacaaacacataaaaaagaagtgccttta
tcaggtgctccagataaataccatcctgcactctttcctgacccttggagtcttccacca
gaaatccaatccaaatttctttgtttacttgacaagactaacccaacagaagatgaaaaa
aatggtggtagagtcttatcaccctctttgcagcagaagaaggatgacatgctgactcgc
aagattgagtcctggaaagtaggaagtgttctgcagccagtcagttttactccaggtcca
tgcagcgaagaagactggaaaaaatgggaggctatcagagaggccagcaaagttagacac
aagaaacgccagatggttgagagactgtttcaaaagctttctgatgaggatgggagcaag
tctttgaatgatgtcagtgcagatgaggcccaagtgctgcgccaggttcgttatgaagag
ctacagaaaataaaatccaagctacaggaacaagatcaaaagtggcaagatgatctagca
aaatggaaaaatcgtcgaaaaagtttcacttcggatttgcaaaagaaaaaggaggagaga
gaagaaatcgaaaggagagcctctgagacttctgaaagaaatagcaagtcactgaaagaa
atgcagcaggacagggagaacagagatcaaggatcctacagcgacatgcagcaaaagagt
gaacgcactcgaatgtattcatcagatgatgtatttagtgaagaaaaacatccttccaga
ccatcagtagcaaaagattatcttgtcgaaaaagatgcctcttacagctttaagaagaat
gaaaaatcatatgctgcacaaactaacaaagagaattctcaaaagctagagatctatgca
acagctgaaactcaaattccatctaaaagcctattagaagaacagagctcagtccctttg
tctactcaccattcagtgaatgcacaaatggggtcagctcgggtttcagcttctctcccc
agaagtagccagaaaacagatacctctaggttaacatctgtggttacaccaagacctttt
agtgtccactcaagaggaatttcatcacttcccagatcatttacggtggacgatgtccag
aaatataatggagaagtagatggagccaagagatctcaaactttgctcaccagctattca
ttttcaacactggaagcaggaccacttctctccgcagatgcaatgacaagtggtggtgag
gaagaaaaggaaagcattaaaagaaaagagtctcctaccctgagagcttctgctacatcc
caataccaggatgcagtgtcccctgatcttaaatcagagtattatactcatcctgaccct
gttacagttgcagcttctgcagaaataagaaacctgccagagtcagaggtttcagtgtca
caggacaagtacagtgaaatgagaatcagtataaaccagagatctggtaacagtcggaac
tttgggttcaccacaaattggaaaccttctggggtttttgtacagacaattgaaggtagc
actgcagaccttggccagctgcaagtagatgatgaaatcattgctgttaatggcacaaga
gtttcacaaatggaccataatcagtgggaggaagccatggccaatgcactagaaactgga
aacttggtcatggatgtcagacgatatggaaaaaatgattggggcaaagaccagccttcc
ctgccatatgtaaggcataaaatcctcaatctcaccagtatggctaccaacattgtaggt
acacctgaaaataaatggattgaagcaacttctggagatcacaattctaccaactcttca
aacatatcagccaaaagagatttcttctacagccttcaaaattctgatgctggagcaaaa
gtgataaatggaatgcaagcagatatgagctctcatgagcaaaaagaatctgaacctatt
tctttgaaaaacttaaaaagacggtcacaattttttgaacaaggaggctcagagcctgca
gtgtctgatctcccagttccatctattaatgctccaagtcgttggacttgggaccaagaa
gaagagagaaaacgacaggaaaaatggcagaaagaacaggaacgtttacttcaggagaaa
tacaaacgtgaacaggagaaactgcggaaagaatggctacaggctcagcaagaagcagaa
agagagagttccaaatatttagatgaggagccgactgtcctaaccttcaacacagtatcg
gtacctgcacatgcaccacctatttctcgctggggaagaaacgtgggagaagacgctgat
gatcttgaaggaggcagaagacatgagtggggggaaccgcagcagaatgaggaagagaag
gaaatggaaaggaggagactccaggaggaaaggagacttcaagaggaaaaagccctgcat
ttggagcaaaaaaggaaagcccaagaactagagcttgaaagagagcaaaaagaaaaggaa
caacaatatgccgaggagcagaagcagcgagcagaggccgaggagcagaagcggcgcatg
gaaaaagaaagggagataccaatacagatgccccaataccgaagacattatgaccattat
gaagtatctaaaaactttgaagatccatctggccactttcttgctgacagaaataaatct
agatcgacttcagaactggatgattaccccagaagtcaaaatggtacaaacaacaaatat
ttggaaaagtcttggaatgtcagtgattcacagaaggggtctcagaaagagcctgctcag
tcttcagcagaaatagagagacaacatatccttcaggaaatgagaaagaaaacatcacta
catacagacaacagctggattaggcagcgtagttctagtgtgcataaggaccctgttaat
cttcacaagaatacaatgaagagaggtgaatctttagataaccttgattcctcaagaaca
agttcatggagatctccactttggacgaatcaatctgcctcttccacatccttgtcatct
aatcaagattttagtcgctctgctgctccactagtgtctacttcgaaccgagcttacatg
cgtaccccctcctccagtgtagcacctccttcagccagctctggaagatcagcaacttca
tcccacagtttcccctcagcaccttcgtctgtacctcgtgctcagtctcctacctctgct
tcccgatcaggagctcagcagcggaacaggtcagtcagtgggaagaaaatatgctcatac
tgtaataacgttctgggcaaaggagcagccatgatcatcgaatctcttggtctttgttat
catttacattgttttaagtgcacagcttgtgcatgcgacctcggaggctcgcactcagga
gctgaagtcaggatccgaaacaatgaactcttctgcaacgactgctatgtcaaatttaaa
actggacagccaacctccatgtga
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integrated database retrieval system
