Caretta caretta (Loggerhead turtle): 125637690
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Entry
125637690 CDS
T09292
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04150
mTOR signaling pathway
ccay04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125637690 (LRP5)
04150 mTOR signaling pathway
125637690 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125637690 (LRP5)
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125637690 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125637690
NCBI-ProteinID:
XP_048708493
LinkDB
All DBs
Position
6:complement(14144074..14388227)
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AA seq
1619 aa
AA seq
DB search
METAAAAAPPPLRLLLLAAAVLQCHLGSLRASPLLLFANRRDVRLVDAGGVKPESTVVVS
GLEDAAAVDFQYSQGVIYWTDVSEEAIKQTYLNQTGNVVQNVIISGLVSPDGLACDWIGK
KLYWTDSETNRIEVANLNGTSRNVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAG
MDSSTRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHP
FALTLSGETLYWTDWQTRSIHACDKRTGEKKREILNALYSPMDIQVLSPERQPYFHTPCE
ENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGKTCKAGAEEVLLLARRTDLRRISLDMP
DFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGSGAQTLVTTEINHPDG
IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGE
NPKIECAYLDGSERRVLVNSSLGWPNGLALDLEEDKLYWGDAKTDKIEVINVDGTMRKTL
LEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKIRASRDIIIDQLPDLMGLKAASVTKVF
GTNPCAENNGGCSHLCFFTPLETRCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISL
ETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDISLKTISRAFMNGSSVEHVIEFGLDYP
EGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEW
GGKPRIVRAYMDGTNSITLVDKVGRANDLTIDYADQRLYWTDLDTSMIESSNMLGQEREI
IADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTNGKNRTLIQGHLDFVMDILVFHSSRQ
DGLNDCMQNNGQCGQLCLAIPNGYRCGCASHYSLDPNSRNCSSPTSFLLFSQKSAISRMI
PDDQQSPDIILPVHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGSQPFTVMSTPNQ
NQNPEKQPHDLSIDTYSHTLYWTCEATNSISVHRLNGEPIGTVLKGDHDKPRAIVVNAER
GYMYFTNMQERAPKIERAALDGTEREVLFSTGLIRPVALVIDNKLGKLFWVDADLKRIES
CDLSGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKTSGYKRTRIQGRIAHL
TGIHAVEEVDMDEFSAHPCSRDNGGCSHICIAKGDGTPRCSCPDHLVLLQNLLTCGEPPT
CSPDQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSAAQFQCEKGQCIDARLRCN
GEIDCQDKSDEADCNTICLPNQFRCASGQCILIKQQCDSFPDCIDGSDELMCEKNTSSDE
PQPHVSAIGPVIGIILSLLVMGGMYFVCQRVVCQRYAGPNGPFPHEYVSGTPHVPLNFIA
PGSSQHGTFTGKDGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQ
ILNPPPSPATDRSLYNTEMFYSSNIPSTTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSR
WKANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcggcggccgcagccccgccgccgctgcggctgctcctgctggccgccgcg
gtgcttcagtgccacttgggctcgctgcgggcttctcctcttctgcttttcgccaatcgt
cgggatgtcagactggtggatgctggaggagtgaagccggagtccactgtagtggtcagt
ggcttagaagatgccgctgcggttgactttcagtactcacaaggcgtcatttactggaca
gacgtgagcgaagaagccatcaagcaaacgtacttgaaccaaactgggaatgtagtgcag
aatgtcattatttctggtctggtttctccggatggcctggcatgtgactggattgggaaa
aagctgtactggacggactcggaaaccaataggatagaagttgctaatctcaatggaacg
tctagaaatgtcctcttctggcaagaccttgaccagccaagggcaattgccttggatcca
gcacatgggtacatgtattggacggactggggagaaacacccagaatagaacgggcagga
atggatagcagcactcgaaaaataattgttgattcagacatttattggcctaatggactc
acaatagatcttgatgagcagaagctgtactgggctgatgcaaagctgagtttcattcat
agagctaatctggatggttcctttaggcaaaaggttgtggaagggagtctcactcaccca
tttgcgctgacgttgtctggagagacgttgtattggacagactggcagactcgctccatt
catgcctgtgacaaaaggaccggagagaaaaagagagaaatactgaatgcactttattca
ccaatggatatccaggtcttgagcccagagcggcagccatactttcatactccctgcgaa
gaaaacaatggtgggtgctctcacctctgcctgctgtctcccagagaccccttctacagc
tgtgcctgtcccactggagtgcagctggaagacgatggcaagacctgtaaagcaggtgct
gaggaagtcttgctgctcgctagaaggacagatttgcgaagaatctccttggacatgcca
gacttcactgatattattctgcagatagacaatatcaggcatgcgattgcaatagactat
gatcctgttgagggctacatatactggactgacgatgatgtccgggctattcgtcgggct
taccttgatggttctggagcacagaccctagtgaccacagaaattaatcatcctgatggc
atagcagtggactgggtggcaaggaacctgtactggactgacacaggaacagatcgcatt
gaagtaacccgactgaatgggacatccagaaagatccttatatcggaaaatctagatgaa
cccagagcgatagtgctaaatcctgtgatgggctacatgtattggacagactggggtgaa
aatccaaagatcgagtgtgcttatctggatggctctgagaggagggtcctagtgaacagt
tctctaggttggcctaatggcttggcactggatcttgaagaagacaaactctactgggga
gatgcaaagacagacaaaattgaagtaataaatgttgatggaacaatgagaaaaactcta
ctagaagataaacttcctcatatatttgggtttactttgctgggggactacatctactgg
acagactggcagagacgaagcattgaaagagttcacaaaataagagcaagcagggatatc
atcatagatcagttgccagacctaatgggcctcaaagcagcaagtgtgaccaaagtgttc
ggaaccaatccttgtgctgagaataatggaggctgtagccatctgtgtttcttcacacct
ctggagaccagatgtgcttgtcccataggactggagttgctgagcgacatgaagacctgc
atcattcctgaagcctttcttgttttcaccagcagagcagcaattcataggatttccctt
gaaaccaacaataatgatgtagctattcctcttactggtgtcaaagaggcatctgctctg
gattttgatgtgtctgataatagaatctattggactgatattagcttaaagaccataagc
cgggcattcatgaatggaagctctgttgagcatgtgattgagtttgggttagactatcct
gagggaatggcagtagactggatgggaaagaacctttactgggcagatactggaaccaat
cgaattgaagtagcgcgcctggatggacagtacagacaggttcttgtgtggaaggatttg
gataaccccaggtctttggcccttgatcctactaaagggtatatgtactggacagagtgg
ggaggtaaaccaaggatcgttcgggcatatatggatgggacaaacagcatcactttggtt
gataaagtgggacgtgccaatgatttaactattgactatgcagaccaaagactatattgg
actgacctagacacaagtatgattgaatcatcaaacatgctaggtcaagaaagggaaata
atagcagatgatctacctcatccatttggactaacacagtacagtgattacatctactgg
acagactggaacctacacagtatagaaagagcagacaagaccaatgggaagaaccggaca
ctaattcaaggacatctggattttgtgatggacatcctggtctttcactcttcgcgccag
gatggcttgaatgactgcatgcaaaacaatgggcagtgtggacaattgtgccttgccata
ccaaatgggtatagatgtggctgtgcctctcactattccttggatcccaacagcaggaac
tgcagttcacccaccagcttcttgctgtttagccagaagtctgcaatcagtcggatgata
ccagatgaccagcaaagtccagatatcatccttccggtgcatggtctaagaaatgtcaag
gccattgattatgatcccttagataaactgatttattgggtggatggacgtcagaacatt
attaaaagagccaaagatgatggttcccagcctttcactgtgatgagcactccaaaccaa
aaccaaaatccagagaagcagccgcatgacttgagtattgatacttacagccataccttg
tactggacctgcgaggccacaaattcaatcagtgttcacagacttaatggagaaccaatt
ggaacggtgttaaaaggagatcatgacaagccaagagccatagtagtcaatgcagagcga
gggtacatgtacttcaccaacatgcaagagcgagccccgaagatagagcgtgcagccctg
gacggcacggagcgagaagtgctctttagtaccggtctgatccggcctgttgcgctggta
attgacaacaagcttgggaaactcttctgggtggacgcagatctcaaacgcattgaaagc
tgtgatttgtcaggagctaaccgtgtgacactggaggactccaatatcctgcagccaatg
ggactgactgtgttggggaatcacttgtactggattgaccgtcagcagcagatgattgag
agagttgagaaaaccagtggatacaagaggactagaatccaaggccgaattgctcacttg
acaggcattcatgcagtggaagaagttgatatggatgaattttctgcacatccatgttcc
cgtgacaatggtggctgttcacacatctgcattgctaaaggagatggaaccccaagatgc
tcatgcccagatcaccttgtacttttacagaacctcttaacatgtggagaacctccaact
tgttccccagaccagtttacctgtgcgactggggagatagactgtatcccaatggcatgg
cgatgcgatggatttccagaatgtgatgatcagagtgatgaagatagctgtcctatatgc
tcagcagcccagtttcagtgtgagaaaggacaatgtattgatgcccgcttgcggtgtaat
ggagaaattgactgccaagataaatccgatgaagcagactgcaatacaatctgtctccca
aatcagtttcgatgtgccagtggccagtgcatcctcataaaacagcagtgtgactccttt
ccagattgcatcgatggttccgatgaacttatgtgtgaaaaaaacacatcctcagatgaa
cctcaaccccacgttagtgctattggaccagtcattggtatcatactgtcccttttggtc
atgggaggaatgtattttgtttgccagcgagtggtatgtcagcgctatgctggacccaat
ggaccttttccgcatgaatatgtcagcggaacccctcatgtgcctcttaattttatagct
ccagggagttctcagcatggcacttttactggtaaggacggcatctcttgtggaaagtct
atgattagctccatgagcctcatgggaggaagtagcggtgcccctctgtatgacagaaac
catgttactggagcctcttctagtagttcgtccagcaccaaagccactttctacccacag
attttgaacccacctccttccccagccactgatcgctctttatataacacagagatgttc
tattcctcaaacattccttcaacaacaagatcttacagaccctaccttatacgaggaata
gctccgcccacgacaccatgcagcacagatgtgtgcgacagcgactacaccacaagccgg
tggaaggccaacaaatactacatagatctaaattcagactcagatccttatccccctccc
cccacgcctcgcagccagtacatgtcggcagaagaaagctgccctccatctcccgccaca
gagcgaagttactttcacctctacccccctccaccgtctccttgtacagactcctcatga
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integrated database retrieval system
