Caretta caretta (Loggerhead turtle): 125637721
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Entry
125637721 CDS
T09292
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03015
mRNA surveillance pathway
ccay03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125637721 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125637721 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125637721 (CPSF7)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125637721 (CPSF7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
125637721
NCBI-ProteinID:
XP_048708586
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All DBs
Position
6:5591054..5611271
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AA seq
461 aa
AA seq
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MSEGVDLIDIYADEEFNQDSEFSNADQMDLYDDVLAASSQPPESRTSSSEAPTEIRQEQS
PKPNSKSPAILYTYSGLRNKRAAVYVGSFSWWTTDQQLIQIIRSVGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKILNGDKVEVRLATRQNLSQFEAQARKRVPPRA
HSRDSWDSMDGRATPTENAVPPPRVEKPPSVLPFFNRPPAAMPLMALPPPPMPPPPPLSS
SFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAVPPALHLNPAFFPPPNATLAPPLDTY
KASAAYNHSSRELGPLPPPVSEAEFEEIMNRNRAISSSAISKAVSGASAGDYSDAIETLL
TAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSMGASSSSSRKRHRSRERSPSRSR
ESSRRHRDPLHNEDRHEDYFQERNREHERHRDRDRERDRHH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggggtggatctgatcgatatctacgccgacgaagagttcaaccaggactcc
gaattcagtaatgctgaccagatggatctgtacgacgacgtgctagcagcaagctcgcag
ccacccgaaagccgcaccagcagctcagaggcaccgaccgagatccgccaggagcaatcc
cccaagccaaacagcaaatcgcctgccattctgtatacctacagtggcctgcgcaacaaa
cgggctgccgtgtatgtgggcagcttctcctggtggacaactgaccagcagctgatccag
attattcgctcagtgggggtctacgatgtggtggagctgaaattcgctgagaaccgagcc
aatggccaatccaaagggtatgcagaggtggtagttgcctctgagaactcagtccacaag
ctcctggagctgctgcctggcaagatcctcaatggggataaggtggaggtgagactggcc
acccggcagaacctgtcgcagttcgaggcacaggctcggaaacgggtgccgccgagggct
cactcccgggactcctgggattcgatggatggccgagccacgccgacagagaatgccgtg
ccgccccctcgtgtggagaagcccccttccgtgctgcctttctttaaccgcccccctgct
gccatgcccctcatggcccttccccctcccccgatgcctcccccgccacctctctcctcc
agctttggagtgccacctcccccgccaggaatccactaccagcatctaatgccccctcct
cctcgactgcccccccacctggccgtgccacctccaggggcagtccctcctgccctgcac
cttaaccctgccttcttccccccgccaaatgcaacgctggccccgccgctggacacctac
aaggcctctgcagcatataaccacagcagtcgagagctaggcccactgcctccccccgtg
agcgaagccgagtttgaggagattatgaacaggaaccgagcgatttccagcagtgccatt
tccaaagcggtgtccggagccagcgcaggggattacagtgatgccatagagaccctgctc
acggccatcgctgttatcaaacagtcccgcgtagccaacgacgagcggtgccgtgtcctc
atctcctccctcaaggattgtcttcatgggatcgaagccaagtcctacagcatgggtgcc
agcagcagctcctccagaaaaagacaccggtctcgggagaggtcgcccagtcggtcccgc
gagagcagcaggaggcaccgggacccactccataatgaggatcggcacgaggactatttc
caagaaaggaaccgggagcatgagagacatcgggacagggacagagaaagggaccggcac
cactga
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