Caretta caretta (Loggerhead turtle): 125637869
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Entry
125637869 CDS
T09292
Symbol
RBM26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccay01009
]
125637869 (RBM26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125637869 (RBM26)
03041 Spliceosome [BR:
ccay03041
]
125637869 (RBM26)
Protein phosphatases and associated proteins [BR:
ccay01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125637869 (RBM26)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125637869 (RBM26)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125637869 (RBM26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
RRM_3
Motif
Other DBs
NCBI-GeneID:
125637869
NCBI-ProteinID:
XP_048708877
LinkDB
All DBs
Position
1:complement(81575365..81677260)
Genome browser
AA seq
1011 aa
AA seq
DB search
MVAKMIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCVDQLDVF
LQKETQIFVEKLFDAVNTKSYLPPPEQPSSGSLKVEFFQHQEKDIKKEEIIKEEEREKKF
SRRLNHSPPQSSSRYRETRSREERKKDERSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYS
RSRSRSWSKERLRDRDRDRSRSRSRSRTRSRERDLGKPKYDLDRTDPLENNYTPVPSVTN
ISSGHYPVPTLSSTITVIAPTHHGNNTTESWSEFHEEQLDHNSYGRPPLPKKRCRDYDEK
GFCMRGDMCPFDHGSDPVVVEDVNLPGILPFPAQPPVVEGPPPPGLPPPPPILSPPPVNL
RPPVPPPGPLPPSLPPVTGPPPPLPPLQPAGMDAPPNSATSSVPTVVTTGIHHQPPPAPP
SLFATETYDTDAYNPEAPSITNTSRPMYRHRVHAQRPNLIGLTSGDMDLPPREKPQNKNS
MRIVVDSESRKRSIGAGDGGIPTKKAWFDKQNFNRTNNPGFQKKVQFGNENTKLELRKVP
PELNNISKLNEHFSKFGNLVNLQVAYHGDPEGALIQFATHEEAKKAISSTEAVLNNRFIK
VYWHREGSAPQMSATMQKVIQPLVQQPSLPVKQSVKERLGPVPASNIEPAEAQSASTEIA
QNVTKLSVKDRLGFVSKLPAPATEKVLSTSTGLTKTVYNPAALKAAQKSLPVVSTSILDS
NEAQKKKQEALRLQQDVRKKKQEILEKHIETQKMLISKLEKNKPMMKSEDKAEIMKTLET
LTNSITKLKDELKGVSSGGAPLKSLKTKAQMQKELLDTELDLYKKMQAGEEVAELRRKYT
ELQLEAAKRGILSSGRGRGINARGRGASRSRGRGIRGRGRGRGVPGHAVVDHRPRALEIS
AFTESDREDLLPHFAQYGEIEDCQIDDSSLHAVITFKTRAEAEAAAVHGSRFKGQDLKLA
WNKPVINMSAVETEEAEPDEEEFQEESLVDDSLLQDDDEEEEDNESRSWRR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgaaaatgatcatagaaaacttcgaggccctgaaatcctggctcagcaaaacc
ttggagcccatatgtgatgcagatccctcagccctagctaaatacgttcttgccttggta
aagaaggataaaagtgagaaagagctgaaggcattatgtgttgatcagctggatgtattt
cttcaaaaggagacccagatatttgttgaaaaactttttgatgctgtgaatacgaagagc
tatctaccaccaccagagcagccctcatcaggaagcctaaaagttgaattttttcaacac
caagaaaaagacataaaaaaggaagagataattaaagaggaagagcgagaaaaaaagttt
tctagaagactaaatcacagccctcctcagtcaagctctcggtaccgagaaactagaagc
cgtgaggaaagaaaaaaagatgaacgttctcgcaagagagattatgaccgtaacccccct
agacgggattcatatagagacaggtacaacagaagaagagggcggagtcggagctacagc
aggagtcgaagcagaagttggagtaaggaacgattgcgggaccgggatagggacaggagc
aggagcagaagtagaagcagaacacgaagcagagaaagagatttgggaaagccaaaatat
gatttggatagaacagatccattagaaaacaattatactccagttccatctgtaacaaac
atttcatctggccattaccctgtccctacgctgagtagcactattacagttattgctcct
actcatcatggtaataacactactgaaagttggtcagagttccacgaagaacagttggac
cacaactcatatggaagacctccactgccaaagaaacgctgcagagattatgatgaaaag
ggtttctgtatgagaggagacatgtgtccctttgatcatggaagtgacccagtagttgta
gaagatgtcaatcttcctggcatcctgccttttccagcacagccccctgttgttgaagga
ccacctccacctggacttcctcccccgccaccaattttaagtcctccacctgttaatctt
agaccgccagtgccacctccaggccctttaccacctagtcttccacctgttacaggacca
cctcctccacttccacctttacaacctgctggcatggatgctcctccaaactcagcaacc
agttccgttcctactgttgttacaactggtattcatcaccagccacctcctgctccaccc
tctctctttgcaacagaaacatatgacacagatgcctataatcctgaagctccaagtata
acgaacacttcaaggcccatgtacaggcacagagtgcatgcccaaaggcctaatttgata
ggacttacatcaggtgatatggatctgccccccagagaaaaacctcagaataaaaacagt
atgagaattgtggtggattctgagtccaggaaaagatcaattggtgcaggagatggagga
attcctacaaagaaggcttggtttgacaagcaaaactttaacagaacaaacaatccaggt
tttcagaagaaggtgcagtttggaaatgagaatacgaagcttgaattgaggaaagttcct
ccagaacttaacaatatcagcaaacttaatgagcacttcagcaaatttggaaacttagtc
aacttacaggttgcctatcatggtgatccagaaggtgcccttatccagtttgccacccat
gaagaagcaaagaaagctatatcaagcacagaagcagtattaaataatcgctttattaaa
gtctattggcatcgagaaggcagtgctccacaaatgtcagctaccatgcaaaaggtaata
cagcctttagttcagcaacccagtttaccagtgaagcagtcggtcaaagagcgattaggt
cctgtacctgcaagtaatattgagcccgcagaggctcagagtgccagtacagaaattgct
cagaatgtgactaaattatctgtgaaagatagactgggttttgtgtcaaaactgcctgct
ccagcaacagagaaggtattgtccacgtctactggcttgactaaaactgtatacaatcct
gctgctttgaaggcagcacagaaatctttgcctgttgtttccacttccattctagactct
aatgaagcacagaagaaaaaacaggaagcactaagacttcaacaagatgtgagaaagaaa
aaacaggagatcttagaaaagcacattgaaacacaaaagatgctgatttcaaagttggag
aagaataaacccatgatgaagtcagaagacaaagcagaaataatgaaaacactggagact
ttgactaatagcattaccaagttaaaggatgaattaaaaggtgtctcatctggaggtgct
cctctgaaaagcttgaaaactaaggctcagatgcagaaagaattactggatactgagctt
gatttgtataagaagatgcaggctggggaagaagtggctgaactaagaagaaagtacaca
gaactgcagcttgaagctgccaaacgagggattctttcttcaggtcgtggtagaggaatt
aatgcacgaggtcggggtgcatcacgtagcagaggcagaggaatacgaggccggggtcgt
ggaagaggggttccaggtcatgcagtagtggatcatcgaccgagggcactggagatctct
gcattcacagaaagtgatagagaagatcttcttcctcattttgcgcaatatggtgaaatt
gaagattgccagatagacgactcttctctccatgcagtgattacttttaagacaagagca
gaagctgaagctgctgctgttcacggatctcgattcaaaggacaggatttgaagttggca
tggaataagccagttattaatatgtctgctgttgaaacagaagaagctgaaccagatgaa
gaggaatttcaggaagaatccttggtggatgattcattgcttcaagatgatgatgaagag
gaagaggataatgaatctcgttcatggagaagatga
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