Caretta caretta (Loggerhead turtle): 125637916
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Entry
125637916 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: platelet glycoprotein Ib alpha chain-like
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125637916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccay04090
]
125637916
CD molecules [BR:
ccay04090
]
Proteins
125637916
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_LRWD1
LRR_9
LRR_14
LRR_NXF1-5
LRR_EndoS
LRR_5
Motif
Other DBs
NCBI-GeneID:
125637916
NCBI-ProteinID:
XP_048708957
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All DBs
Position
6:10652298..10656996
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AA seq
632 aa
AA seq
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MLCPTSPHLALLALLSVAGAVGPGEPCQSEMNLIKDQLQVNCSGQGLRVVPPALPKNTGI
LLLSTNRLASVSTASFQHLPELAELDLSGNGLGALHTGPPLPSLQELVLSHNALGVLPTL
QGLPALTRLALAHNNISALLPGAFRAVGQLKDLNLRGNQLRTLPEEVFEGLAGLKDLDLS
DNALDELPRGLLTGLELETLRLSGNQLRTLPSGFFPEEHTFAFVFLAGNPWRCDCGLAYL
RGWIADNDFSVYTQEQRSEGLQIENDPRSPVCDAPLRHRGSPVLEFKQACGKAGDADLDI
DGTMTEEGIPVPSATAPSATQPPTTPVPLTTAPSATLPPTTPVPLTTALSATLPPTTPVP
PTTATSTTLPPTTPVSPTTAPSTTLPPTTPVPPTTAPSTTLPPTTRVPPTTAPEPASPAP
PRLPSTPRTPTTTTLIPSPPFHTSPLHINPCHQPPPPTGAPRLCVCPTPPPAMPVAGRQQ
GREGPVWGHWVLTHCCLLHLMLYLASLLLLLLPMVALMGWMSWVYLSWYRPALRGPPGAR
LVRYQLLRKGELAAPTMMHLSSFKSPTEPPTFRTTRELQIHRDPPMPSFRRVTRRLLSVG
GLGPWRAPSAYSLDRGEAAIGAVRVKYATTTL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccccacctcacctcacctagccctcctagccctgctctctgtggctggcgct
gtgggtccgggggagccatgccagtccgagatgaacctgatcaaggatcaactgcaggtc
aactgctccgggcaggggctcagagtggtgccacctgccctgcccaagaacaccggcatc
ctgctgctcagcaccaaccgcctggcgtccgtctccactgcctccttccagcacctccct
gagctggctgagctggacctgtcaggcaacggcctgggtgcgctgcacactgggcccccc
ctgccctcgctgcaggagctagtcctgtcccacaatgccctgggggtcctgcccaccctg
cagggcctgcctgccctcacccgcctggccctggctcacaacaacatttcagcgctgctg
ccaggggccttccgggctgtggggcagctgaaggatctgaatctacgggggaaccagctg
cggacgctgccagaagaggtctttgagggcctggctgggttgaaggacctggatctgtct
gataacgccctggacgagctgccacgggggctgttgactgggctggagctggagacactg
aggctgtcagggaaccagctccgcactctgcccagcggcttctttcccgaggagcacacg
ttcgccttcgtcttcctggcagggaacccctggcgctgtgactgtgggctggcctatctg
cggggctggattgcggacaatgacttcagcgtctacacccaggagcagaggtcagaaggg
ctgcagatcgagaatgatccccgcagccccgtgtgcgatgcgcccctcagacaccgaggg
agccccgtcctcgagttcaaacaggcctgcggcaaagcaggggacgcggacttggatatt
gatgggacaatgacagaggagggaatccctgtgccctccgctactgccccctccgccacc
cagcccccaaccactcccgtgcccctcactactgccccctccgccaccctgcccccaacc
actcccgtgcccctcactactgccctctccgccaccctgcccccaaccactcccgtgccc
cccactactgccacctccaccactctgcccccaaccactcccgtgtcccccactactgcc
ccctccaccaccctgcccccaaccactcccgtgccccccactactgccccctccaccacc
ctacccccaaccacacgtgtgccccccactactgccccagaacctgcatccccagcaccc
ccacggctccccagcacccccaggactcccaccaccaccacccttatcccctcgcctccc
ttccataccagccctctccacatcaacccctgccaccagccaccccctccaacgggggct
ccccgcctctgcgtgtgtcccaccccacccccagcgatgcccgtggctgggcgtcagcag
ggcagggagggcccagtgtggggccactgggtgctcacccactgctgcctgctgcacctg
atgctctacctggcctccttgctgctgctgctactgcccatggtggctctcatgggctgg
atgagctgggtatatctgagctggtatcgcccagctctgaggggtcccccaggggcacgg
ctggtgcggtaccagctgctgagaaagggggagctggcagcgcccaccatgatgcatctc
agcagcttcaagagccccaccgagcccccgaccttccgcaccaccagagagctgcagatt
caccgtgacccccctatgccctccttccgccgtgttaccaggaggctgctgagtgtgggg
gggctgggcccctggcgggctccctctgcctacagcctagacaggggggaagcagctatt
ggggctgtcagggtgaaatatgcaaccaccaccctctaa
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