Caretta caretta (Loggerhead turtle): 125638065
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Entry
125638065 CDS
T09292
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125638065 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125638065 (LRRC4C)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
NGL family
125638065 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRRNT
LRR_LRWD1
Ig_6
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
125638065
NCBI-ProteinID:
XP_048709245
LinkDB
All DBs
Position
6:complement(48499849..49354447)
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AA seq
637 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCNTPPNLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAELKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSIGNTTASATLNVTALDNGYTYFSTVTVETMEPSQDEARTTEQIGPTPVID
WETTNVTTSLTPQSTRSTEKTFTIPVTDASNGIPGIDEVMKTTKIIIGCFVAITLMAAVM
LVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLSMPAIEHEHLNHYNSYKS
PFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctactggctcttcaacttcttgtggtggctggt
ctagtcagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagcaaagtg
atctgtgtgcggaagaatctgagagaagtcccagacggcatctccaccaacacacggtta
ttgaatctccatgagaaccagatccaaataattaaggtgaatagtttcaaacatttgaga
cacctggaaatcttgcagctgagtaggaatcacattagaaccattgaaataggggccttc
aatggtctggccaatctcaacactctggaactttttgacaatcgtcttaccaccatccct
aatggggcttttgtatacctgtcaaaactgaaggagctttggttgagaaacaaccctatt
gagagcatcccttcttatgcttttaacagaatcccttccctacgtaggctggatttgggg
gaactaaaaaggctttcatacatctcagaaggtgcttttgaaggtctttccaatttgagg
tatttgaaccttgctatgtgcaaccttcgagagatccctaacctcacaccactcgtaaaa
ctggatgagttagatctttctgggaaccatctgacagccatcaggccggggtcctttcaa
gggttaatgcatcttcaaaaattgtggatgatacagtcccagattcaagtgattgaaagg
aatgccttcgataaccttcagtcactggtggaaatcaacctggcgcacaacaacctaaca
ctactgcctcatgatctcttcacaccactccacctagaaaggatccacctgcaccacaat
ccttggaactgcaactgtgacattctttggctcagctggtggattaaggacaaagcaccc
tccaacactgcatgctgtgctcgctgcaacacacctcccaatttgaaaggaaggtacatc
ggtgagctggacctgaattatttcacgtgttatgctccggtgatagtggagccaccagca
gacctcaacgtcacagaaggcatggctgcagaactgaaatgccgagcatcgacctccctg
acctctgtatcttggattactccaaatggatcggttatgacgcatggggcatacagagtt
cggattgctgtgctcagtgatggcacattaaattttacaaaggtgaccgtgcaagacacg
ggcttgtatacctgcatggtgagtaactctattgggaataccacagcttctgccacactg
aacgtgactgcactggacaatggttacacatacttttcaactgttaccgtagagactatg
gaaccttctcaggatgaggcccggaccacagagcagattgggcccacgccagttattgac
tgggagaccaccaatgtgacaacttctcttactccacagagcacaaggtcaacagaaaaa
acatttaccatcccagtcacagatgcaagcaatgggatcccaggaatagacgaggttatg
aagactaccaaaatcataattggttgttttgtggctatcactctcatggccgctgtgatg
ctggtaattttctacaaaatgaggaaacagcatcaccgacagaaccaccatgctccaaca
cggactgtagagatcattaacgtggatgatgaacttactggtgatacacccatagagagt
cacttgtccatgccggccatagagcatgagcacctaaatcattataactcttataagtct
cctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcatgaa
ccgttattgatccgaatgaactcaaaagacaatgtacaagagactcagatctaa
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