Caretta caretta (Loggerhead turtle): 125638068
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Entry
125638068 CDS
T09292
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125638068 (PPFIA1)
Membrane trafficking [BR:
ccay04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125638068 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HWE_HK
Motif
Other DBs
NCBI-GeneID:
125638068
NCBI-ProteinID:
XP_048709265
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All DBs
Position
6:43406188..43494903
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AA seq
1291 aa
AA seq
DB search
MKSVMKEIPCRDSSILHFHSCNPAITSASSSSGSWGGTGLRVLITGSALPLAGNRAMGAG
GCGACGQEPHRAACMPPPRSWTCFWLLLGCSTVRGARTAADREPPEEFAALTKELNVCRE
QLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLK
ALKSLFEHHKALDEKVRERLRVALERCSLLEEELGTTHKELMILKEQNNQKRTLTDGVLD
INHDQENTPSTNGKRSSDGSSSHDEDLAKVIELQEIIDKQINEQGQMKERLTALSSRVTE
LEEDLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDL
NDKLENEIANKDSMHRQSEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAAL
SKSDPLSSGNSAAKEAKLLELASKFRKAEERHGNIEERLRQMEAQLEEKNQELQRARHRE
KMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVENAKKQVEDLQHEK
DQLVLNIEAMRAENDQMRIRATSLHHSRPHLGSVPDFRYPMTPLAVADSHTDPYSTSSVL
RRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVSDGEDDRETIFS
SVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNN
GRFRSMNSIPLPFIGGSLAGSSPPGSGRSTPRRIPHSPAREVDRLGIMTLPSDLRKHRRK
SPVSGEEVRDDKTTIKCETSPPSSPRSLHLDRVHKGALHTLSHEDIRDIRNSTGSQDGQV
SNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKESLGQVGLAETDNSSQD
ALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAAC
RANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVW
VTHEEMENLTATPQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDA
RMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRKLNYDRKELERRREESQNEIKDVLVW
SNDRMIRWVLSIGLKEYANNLIESGVHGALVALEETFDFNAFALLLQIPTQNTQGRAVLE
REFNNLLVMGTDRRFDEDDDKSFRRAPSWRKKFRPKDIKGLAAGSAETLPANFRVTASMS
SPSMQPKKMQIDGNVSGTQRLDSTTVRTYSC
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagtcatgaaagagattccttgcagagacagctcaatactgcacttccacagc
tgcaaccctgcaataaccagtgccagcagcagttctggctcctgggggggcacagggctc
cgcgtgctgatcaccggctctgcacttccattggccgggaaccgggcaatgggagctggg
ggatgtggtgcctgcgggcaagagccacacagagctgcttgcatgcctccgcctaggagc
tggacctgcttctggctgcttctggggtgcagcacggtccgcggtgccaggacagccgct
gaccgggagccgcccgaggagtttgcagcacttactaaagagcttaatgtatgcagggaa
cagctccttgaaagggaagaagaaattgctgaactgaaagcagaaagaaataatacaagg
ctgcttttagaacatttggaatgtctagtctccagacatgagcggtcccttagaatgact
gttgtaaagagacaggctcagtctccagcaggagtttctagtgaagttgaagttctcaaa
gcactaaaatcattatttgaacatcacaaagcccttgatgaaaaggtaagggaaagatta
cgagtagcacttgaaagatgtagtttattggaagaagaactaggtactacgcataaagag
ttaatgattctgaaagagcaaaacaatcagaaaagaacactaactgatggggtgctggat
ataaatcatgatcaggaaaatacaccaagcacaaatgggaagagatcttctgatggttct
tcaagccacgatgaagaccttgctaaagttatagaactccaagaaattatagacaagcag
atcaacgagcaaggccaaatgaaggaacgtctcactgctctttctagcagagtgacagag
ctggaagaagatcttgacacagctagaaaagatttaataaaatcagaagaaatgaataca
aagttgcaaagagatgtacgagaggccatggcccaaaaggaagacatggaagagagaatt
acaactcttgaaaaacgctacctcgctgcacagcgtgaagctacatctgtgcatgacctc
aatgataaacttgaaaatgaaattgctaataaagactccatgcaccgacagagtgaagat
aagaacagacagttgcaagaacgactcgaactggctgagcaaaagttgcagcagactttg
agaaaagctgagactttgcctgaggtggaggctgaactggcacagagagttgcagcactt
tcaaagtctgaccctttgtcttctgggaactctgctgctaaagaggctaaactgttggaa
cttgcctccaagtttaggaaggctgaggagagacatggcaacattgaagaacggttacga
cagatggaagcacaattggaggaaaagaatcaggaattgcaaagggctagacacagagag
aagatgaatgaagaacataataaacgtttatcagatactgttgataaacttctgtctgaa
tccaatgaaagacttcagcttcatctcaaggaaaggatggctgctctggaagataagaac
tctcttcttcgagaagttgaaaatgcaaagaagcaagtagaggatcttcaacatgaaaag
gatcaactggtactaaatatagaagcaatgagggccgaaaatgaccaaatgaggatcaga
gccacttctcttcatcatagccgaccacatttgggtagtgtaccagatttcagatatcca
atgacaccattagctgtggctgacagtcatacagatccctatagcacctcatcagtgtta
agacggccccagaaagggcgtttggcagctctacgtgatgaaccttcaaaggttcaaacc
cttaatgaacaggattgggaacgtgcacaacaagcaagtgtgttggcaaatgtagcacaa
gcattcgagagtgatgttgatgtctcggatggtgaagatgacagagagactatattcagt
tcagtcgatcttttgtcacctagtggtcaggctgatgctcagactttagccatgatgctt
caagagcaattggatgcaattaacaaagagattagattgatacaagaagaaaaggaaaat
acggagcagcgagcagaggaaattgaaagtcgagttggtagcgggagtctagataacaat
ggacgatttcggtcaatgaactccattccccttccttttattggtgggtccctcgctggt
tcctctcctcctggcagtggccgttccacaccaaggcgcattccacatagtccagctcgg
gaagtggacagactaggtatcatgacactacctagtgatttaaggaaacaccgtagaaag
tctccagtttctggagaagaagtacgagatgacaagaccacaataaaatgtgagacatca
ccaccatcttcgcctcgatctctgcatttggatagagtccataaaggagctttgcataca
ttgagccacgaagacatcagggacataagaaattctacaggttctcaagatgggcaagta
agcaaccccagtagcagtaatagtagccaggattcccttcacaaagcccctaaaaagaag
gggatcaaatcttccataggtcgcttgtttggtaagaaagaaaagggtcgacctggacaa
accggcaaagaatcattgggacaagttggcttggcagaaacagacaattcttctcaagat
gccttaggactcagcaaacttgggggacaggcagaaaaaaatagaaaactacagaaaaaa
catgaattgcttgaggaagctagaaggcaaggtctgccttttgcacaatgggatggccct
actgtggtggtgtggctagaattgtgggtagggatgccagcatggtatgtggctgcttgc
cgagcaaatgtgaaaagcggggccatcatgtctgccttgtctgatacggaaatacagcgt
gaaattggaatcagtaatcctctgcacaggttgaaactgaggcttgccattcaagagatc
atgtcactaacaagtccatctgcccctcctacatcaagaacgaccacgggaaatgtctgg
gtaacacatgaagaaatggaaaatcttacagccacgccacaaacggaagatgaggaggga
agctgggctcagactctagcatacggtgatatgaaccatgagtggattggcaatgagtgg
ctccccagtttggggctccctcaataccgcagctacttcatggaatgtctagttgatgct
agaatgctagatcacttgactaagaaagatctccgtggacaacttaaaatggttgacagt
tttcacagaaacagtttccagtgtggtattatgtgtttgcgaaaattaaattatgaccga
aaagaactggaaagaagaagagaagaaagccagaatgaaataaaagatgttcttgtatgg
agcaatgacagaatgatccgctgggtactgtcaatcggtcttaaagaatatgcaaataac
cttatagaaagtggagttcatggtgcacttgtggccttagaggaaacttttgatttcaat
gcattcgctctattattacaaatacctactcagaacacacagggtcgtgctgttttggag
agggaatttaataaccttcttgttatgggcactgacaggagatttgatgaagatgatgat
aaaagctttagacgagcaccttcatggagaaagaagtttagaccaaaggacataaaaggc
ttagctgctggatctgcagagacccttcctgcaaacttcagagttaccgcctcaatgtct
tcaccttctatgcagccaaagaagatgcaaattgatggcaatgtatcaggaacacaaagg
ctggattccactacagtaaggacttactcctgttaa
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