Caretta caretta (Loggerhead turtle): 125638136
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Entry
125638136 CDS
T09292
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125638136 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125638136 (CSTF3)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125638136 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
125638136
NCBI-ProteinID:
XP_048709424
LinkDB
All DBs
Position
6:33788044..33865049
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AA seq
718 aa
AA seq
DB search
MSGEGAAGDQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLATIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKMPETVDEAVRII
TGGLPELTVEGNGPVENNTMFNKAVKRPNEDSDDEEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagggagccgctggcgaccaggctgctgaatatgttccagaaaaagtgaag
aaggctgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtagaaaagttgtttcaaagatgccttatgaaagtgctacacatagat
ttatggaagtgttacctttcgtatgtacgtgaaaccaagggaaagctacccagttacaaa
gaaaaaatggctcaggcatatgactttgctctggataaaattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaggcagttggatcttat
gcagaaaaccagaggataactgctgttcgtagggtttaccagcgaggttgtgtgaaccca
atgatcaacattgaacaactctggagagattataacaaatatgaagagggaatcaatatt
cacctagctaaaaaaatgattgaagatcggagtagagattatatgaatgctagacgtgtg
gccaaggaatatgagactgttatgaaaggtctggatcgcaatgctccctccgtcccccca
cagaatactccccaagaggctcagcaggttgacatgtggaagaaatatatccagtgggaa
aagagtaatccactgcgcacagaagaccaaactctcataacaaaaagagttatgtttgct
tatgagcagtgcctgttggtcctcgggcatcatccagatatctggtacgaggctgcacag
tatcttgagcaatccagtaagctgctagctgagaaaggggacatgaacaatgctaaactg
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttactaaagaagaac
atgcttctgtactttgcatatgcagactatgaagagagtcgaatgaagtatgagaaggtg
cacagcatatataaccggctcttggctattgaagatattgatcctactttggtatatata
cagtatatgaaatttgcaaggcgggcagaaggcatcaaatctggaagaatgatatttaag
aaagcgagagaggatgcccgcactcgccatcatgtctatgttacggcagctttgatggag
tattactgtagtaaggacaagtcagtggccttcaagatttttgagttgggactgaagaaa
tatggagacattccagaatatgtactggcatacattgactatttgtctcaccttaatgag
gacaataatacaagagttttgtttgaacgtgttttaacatcaggaagcctcccacctgag
aaatctggagaaatctgggcccggtttttagcttttgaaagtaacattggtgatctagct
agtatacttaaagtggaaaaacggaggtttacagccttcaaagaagaatacgagggtaaa
gaaacagctctgctggtagataggtacaagttcatggatttgtacccttgctctgcaagt
gaacttaaagctcttggttacaaggatgtctcacgtgccaagttagcaaccataattcca
gaccctgtggtggctccttctattgtgcctgttctaaaagatgaagtggacagaaaacct
gaatacccaaaaccagacacacagcagatgattccatttcagccaagacatttagcacct
ccaggtttgcatcctgtgccaggtggtgtatttccagtcccaccagctgctgtagtttta
atgaaactcctcccaccacctgtgtgttttcagggcccttttgtgcaagtggatgaactc
atggagatttttcgaagatgcaaaatgccagaaactgttgatgaagctgtaagaataatt
actggaggcctgcctgaattaactgtggaaggcaatggacctgtggaaaataataccatg
ttcaataaagctgtcaagagaccaaatgaagattctgatgatgaagaggagaagggatct
gtggttcctcctgtacatgacatatacagagcacgacagcaaaagcgaatccgatga
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integrated database retrieval system
