Caretta caretta (Loggerhead turtle): 125638169
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Entry
125638169 CDS
T09292
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04136
Autophagy - other
ccay04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125638169 (ATG13)
04136 Autophagy - other
125638169 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125638169 (ATG13)
03029 Mitochondrial biogenesis [BR:
ccay03029
]
125638169 (ATG13)
Membrane trafficking [BR:
ccay04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125638169 (ATG13)
Atg1 complex
125638169 (ATG13)
Mitochondrial biogenesis [BR:
ccay03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125638169 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
125638169
NCBI-ProteinID:
XP_048709519
LinkDB
All DBs
Position
6:53581749..53631153
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AA seq
552 aa
AA seq
DB search
MDTDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPL
GTITLSCAYRINLAFISTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTTGEDNGA
AYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPPPVVMDTLKVPMMGLAFSHQLSSS
RLSYQPAALGVGSADMGYPVIFAGGLNAAHPHQLIVPGKEGGVPPVPSQPAHGTQADHER
MVMCTPLDGALYSAATPSSSEDTETVSNSSEGKSGSPHDLLETIFVRKVGAFVNKPINQV
TMASLDIPFAMFAPKNVELEDNDPMVNPPDSPDAESPLQGSLRSEGSSGSSTGNTHDDFV
MVDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKN
VKEFDAFVETLQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgatctcaactcccaggacaggaaggacctggacaagttcatcaaatttttt
gctctgaagactgtacaagtgattgtccaggcccgacttggagagaaaatctgtactcga
tcatcatcctccccaacaggctctgactggttcaacttggcaatcaaagatataccagag
gtaactcatgaagcaaagaaagccctggcaggacagctacctgctgttggacggtcaatg
tgtgtagagatctctctcaaaacctctgagggagattccatggagctggaaatctggtgt
ctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcgtacactgtgtacaatagg
ctgtctctgctgctgaagtccttgcttgctataaccagggtgactccagcctacagactt
tccaggaaacagggccatgaatacgtaatactgtacaggatatactttggggaagtgcag
ctgagcggcttgggagaaggtttccagacagtccgtgttggaacagtgggtaccccattg
ggcaccatcactctgtcttgtgcctacagaatcaacctggccttcatttcaaccaggcag
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctac
cccagctcctcacccatgcacccgtgcaattacagaacgactggtgaggacaatggggca
gcatacccatcagtggaagactcccaggaagtgtgcactacctctttctccacctcccct
ccatcccagtgtgtttttactgtcactaaggcacattttcagacccctcctcctgtggtg
atggacaccttgaaggtccctatgatgggactggccttttcacatcaactttccagctct
cgtctttcctatcagcctgctgccctgggagttggatcagctgacatggggtatccagta
atctttgctggtggtttgaatgctgcacatcctcatcagttgattgttccagggaaggag
ggtggggtgcccccagttcctagccagccagcacatggcactcaggctgaccatgagagg
atggtaatgtgcaccccattggatggagccctctactcagcagctactccttccagtagt
gaggacacagaaaccgtatcaaacagcagcgaagggaagagtggctccccacacgatctc
ttggagaccatctttgtccggaaagtgggggcctttgtcaacaaacccattaatcaggtg
accatggccagcttggacattcctttcgccatgtttgcgcccaagaacgttgagctggag
gataatgaccccatggtgaatcctcctgactccccagacgctgagtctcctctacagggc
agcttgcgctcagagggctctagtggtagcagcaccgggaacacacacgacgactttgtc
atggttgactttaaaccagcattctcaaaagatgacattcttccaatggatttggggacg
ttctaccgcgaatttcagaacccccctcagctcagcagcctctccattgacattggggct
cagtccatggcagaggatctggactcgttaccggagaagctggcagtccatgagaaaaac
gtcaaagagtttgatgcctttgtagagactttgcagtaa
DBGET
integrated database retrieval system
