Caretta caretta (Loggerhead turtle): 125638183
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Entry
125638183 CDS
T09292
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125638183 (BRF1)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125638183 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
125638183
NCBI-ProteinID:
XP_048709559
LinkDB
All DBs
Position
6:complement(111080500..111312061)
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AA seq
681 aa
AA seq
DB search
MPGGRVCAVCGGSEIEVDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGAGKTPSLGGGFHVNLGKESRAQTLQNGKRQIHHLGNQLQLNQHCLDTAFNFFKMAVS
KHLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGEKNQKVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSFTAGQR
KLKIQELEKALSKKLEDVEGEISIYQDEIENELENSRPKAKGVLANLTKDESIEDNTASV
FGEEEAEDEELEAAANHLNKDFCNELLDKDRLKKNEGRECKNGNETPVWPPALESLLGPL
PTAASLGITESIQECISPKDRDHSENTGDGELDLSGIDDTEIDRYILDETEAQIKAELWM
KENADYLKEQKEKEARIAKEKELGIYKEHKPKKSAKKREPIQASTAGEAIEKMLEQKKIS
SKINYNVLKDLNSKGSSTPKKEDDSTDDSSNTKKLSRRKSTASRNIASTVNSMGKRLRPL
ISTQLAKKAATEEVTVPVSQTEGPELEKPENVLVESGPVSYNHEEEVEEEEIEEEDDHCM
SALQLMGGNDYGCDMDDDDAY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgggcgggtgtgcgccgtgtgcggcggctcggagatcgaggtggacgcggcg
cggggggacgcggtgtgtacgggctgcggctcggtgctcgaggacaacatcatcgtctcc
gaggtgcagttcgtggagaacagcggcggcggctcctcggccgtggggcagttcgtgtcc
ttggacggtgctggtaaaacaccatcattaggaggaggattccatgtcaatttgggaaag
gaatcacgagcacagactctccagaatgggaaacgtcaaattcatcacttgggaaaccag
ttgcaactcaaccagcattgtcttgatactgcctttaactttttcaagatggcggtgagc
aagcacttaacccgtgggagaaagatgacccatgtaatcgctgcatgtctctacttggtg
tgtaggacagaaggaacgcctcacatgttacttgacctcagtgaccttcttcaggtgaat
gtctatgtgctgggaaaaactttccttctgctggccagagagctctgcataaatgctcca
gctatagatccatgtttatatattcctcgttttgcgcacatgctagaatttggagaaaag
aaccagaaggtatcaatgacagctctaagattattacagaggatgaaaagagactggatg
cacacaggacgccggccatcggggctctgtggagcagctcttctagtggcagcaagaatg
catgatttccgacgtactgttaaagaggttatcagagtggtcaaggtttgtgagtctacg
ttaaggaaaaggcttacagaatttgaagatacaccaacgagtcagctaactatagatgaa
tttatgaagattgacttggaagaggagtgcgatcctccttcatttactgctggtcaaaga
aaattaaagatacaggagcttgagaaagcgctgtcaaaaaagcttgaagatgttgaaggt
gaaatatcaatttaccaagatgaaatagagaatgaattagaaaatagtaggccaaaggca
aaaggagtattagcaaatttgactaaagatgaatctatagaagataatactgctagcgta
tttggagaggaggaggcagaagatgaagaactggaagcagctgctaatcatttaaacaag
gacttttgtaatgaacttctcgataaagatagattaaagaaaaatgaagggagagaatgc
aaaaatggaaatgaaactcctgtatggccacctgcactagaatctctgcttggcccactc
cctactgctgccagccttgggataacagagtctatacaagagtgtatatcccctaaggat
cgagaccacagtgaaaatacaggagatggtgaactagatcttagtggaattgatgacact
gaaatagataggtatatacttgatgaaacggaagctcaaataaaagcagaactgtggatg
aaagaaaatgccgattatttaaaggaacaaaaggagaaagaagcaagaatagcaaaagag
aaggagcttgggatttataaggaacacaagccaaagaagtccgcaaaaaagcgggagcca
attcaagccagcacagcaggagaggcaattgaaaaaatgttggaacagaagaaaatctca
agtaaaattaattataatgtgctaaaggacctgaacagcaaaggaagtagcacaccaaag
aaagaggacgacagcactgatgacagcagcaacaccaagaagctgtcaagaagaaaatct
actgccagtaggaatatagccagcactgtaaacagtatggggaaaagattgagacccttg
atttctacacaactagctaaaaaggctgcaactgaagaggtaaccgttccagtttcacag
acagaagggccagagcttgaaaaaccagagaatgttctggtagagagtggaccggtatca
tataaccatgaggaagaagttgaggaagaagaaatagaagaagaggatgatcactgcatg
agtgcacttcagttaatgggaggaaatgattacggctgtgatatggacgatgatgacgct
tattag
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