Caretta caretta (Loggerhead turtle): 125638362
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Entry
125638362 CDS
T09292
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125638362
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
125638362
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
125638362
NCBI-ProteinID:
XP_048709973
LinkDB
All DBs
Position
6:113966924..113970010
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AA seq
277 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNTSTNKSNQLSPLDGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNLSH
ARSSNYSLSGLTASQTSHSLQDSLLGPLTSSLVDLGS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgctgccgtccttcggcttcacgcaggagcaagtggcctgcgtgtgcgaggtg
ctgcagcaaggggggaacctggagcggctgggccggttcctctggtccctgccggcctgc
gaccacctgcacaagaacgagagcgtcctcaaagccaaggcggtggtggcctttcaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgccccacaaccac
cccaagctgcagcagctctggctcaaggcgcactacgtggaagccgagaagctgcggggc
agacccctgggcgccgtgggcaagtaccgggtgcgccgaaaattccccctgccccggacc
atctgggacggcgaggagaccagctactgcttcaaggagaagtcccggggcgtgctgcgg
gagtggtacgcgcacaacccctacccctcgccccgggagaaaagggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaaaaaccggaggcagcgggacaga
gcagcagaggcgaaggaaagggagaacactgaaaacaacaacacgtccaccaacaaaagc
aaccagctctctcccctggatgggggcaaaccgcttatgtccagctccgaagaagaattc
tcccccccacaaagtccagatcagaactcagtccttctattacagggaaacctcagccat
gccaggagctccaactattccctgagcggcttaactgcctctcagaccagccacagcctt
caggactccctgctaggacccctcacctcgagcttggtagacctcgggtcctaa
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