Caretta caretta (Loggerhead turtle): 125638509
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Entry
125638509 CDS
T09292
Symbol
NALCN
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125638509 (NALCN)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
125638509 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
125638509
NCBI-ProteinID:
XP_048710345
LinkDB
All DBs
Position
1:complement(100019298..100375314)
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AA seq
1738 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYLTFALDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAEIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTNDTQPGNVTWNNLAIPDTHCSRELEEGYQCP
AGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQ
LVAVDMNKPQGRAPACLQKMMRSSIFHMFILSMVAVDVIVAASNYYKGESFKRQHDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHIYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKRSAIEENKYIDQKLRKSVFSIRARNLL
EKETAINKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGK
SLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIV
GREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIIVTICSC
ISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIF
IYLVSLIFLCWMPQNVPAKSGAQLLMILRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLV
SILLLTLMLVFASFGVQLFAGKLAKCNDPNIIAREDCHGIFRINVSVSKNLNLKLRPGEK
KPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFV
FLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFR
AKMYDITQHPFFKRTIAVLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKI
IAMSPAGFWQSRRNRYDLLVTSLGVIWVILHFALLNAYTYMMGACVIVFRFFSICGKHVT
LKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAIT
VLFRIVTGEDWNKIMHDCMVQPPFCTPDNSTYWKTDCGNYAGALMYFCSFYVIIAYIMLN
LLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGR
LEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLE
YTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPS
EDMNANNQDNNAQPETSSQQQLLSPTLSDRGGYRQDSTDGGKPQRKFGQWRLPSAPKPIS
HSVSSVNLRFGGRTTMKSVVCKMNPMSDAASCGSEVKKWWTRQLTVESDESGEDLLDI
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacggaaacaaagctcacgtgtggaagctcagccagttacagactttggccct
gatgaatctttgtcagacaatgcagatatcctgtggattaacaaaccatgggttcactct
ttgctacgcatctgtgccatcatcagtgtcatttctgtttgtatgaacaccccaaagacc
tttgagcattatcctcctcttcaatatttgacatttgctctagatactttattgatgttt
ctctacactgcagagatgatagcaaaaatgcatatccgtgggatagtcaagggggatagc
tcctatgtaaaggatcgttggtgtgtgtttgatggattcatggttttttgtctttgggtg
tcattggtgttacaggtgtttgaaattgctgagatagttgatcagatgtcaccctggggc
atgctgcggattccaaggcctcttattatgattcgagcattccggatatattttcgcttt
gagcttccaagaaccaggataacaaatattttaaagcgttctggagagcagatttggagt
gtttcaattttccttctattctttctgcttctgtacggaattctaggagttcagatgttt
ggaacttttacctatcattgcgtaacaaatgacacgcagccaggaaatgtaacctggaat
aatttagctatcccagatacccactgttccagagagctagaagaaggttaccagtgtcca
gccggatttaagtgcatggaccttgaagatctgggactaagcaggcaagagctgggctac
agtggctttaatgagataggcaccagcatatttactgtgtatgaagctgcttctcaagaa
ggctgggtattccttatgtatagagcaattgacagttttccccgatggcgttcatacttc
tatttcatcaccttaattttctttcttgcctggctcgttaagaacgtgttcattgctgtc
atcattgaaacatttgctgaaataagagtgcaattccagcagatgtgggggtccaggagc
agtaccacctcaacagctactacccagatgtttcatgaagatgctgctggaggctggcag
ctagtggctgttgatatgaataaaccccagggtagagctccagcatgtctacagaaaatg
atgaggtcatcaatatttcatatgttcatactgagcatggtggcagtggatgtcattgtc
gctgctagtaattactacaaaggagagtctttcaagagacagcatgatgaattttaccta
gctgaggttgcttttacagttctctttgacttagaagctcttctgaagatctggtgcttg
ggctttactggatacatcagctcatctcttcacaaatttgaactgctgcttgtaattgga
actactcttcatatttatccagacctctaccattcccagtttacatattttcaggtgctt
agggtagttcgacttataaagatttctcctgctttggaggattttgtgtataagatattt
ggacctggaaaaaaacttgggagcttggttgtattcactgccagccttttaattgtaatg
tcagcaattagtttacagatgttctgctttgtggaagaactggacagatttacaactttt
ccaagggcattcatgtcaatgttccagatccttacacaggaaggatgggtggatgtcatg
gatcagactcttaatgctgtaggacatatgtgggcacctgtagttgctatttactttata
ctttatcatctttttgctactctgattctgctcagcttgtttgttgctgttattttggac
aacttggaacttgatgaagatctaaagaagcttaaacaacttaagcaaagtgaagccaat
gctgatactaaggaaaagcttccactgcgtctacgtatatttgaaaaatttcctaacagg
ccacaaatggtgaaaatctccaagcttccttcagattttacagttccaaaaataagggaa
agttttatgaagcagtttattgatcgtcagcaacaggatacaagctgcttattgcgaaga
ctcccttcggcatcttcttcctcatgtgaccactccaaaagatctgcaattgaagaaaac
aagtatattgaccaaaagctccgtaaatcagttttcagcatcagggcaagaaatcttctg
gaaaaggagacagcaatcaataaaatccttagggcctgcactagacaacgcatgctgagt
ggatcctttgagggtcaacctgcaaaggaaaggtcaatacttagtgtccagcatcacata
cggcaagagcgcaggtcactaagacatggttccaacagccagcgaatcagcaggggaaaa
tctcttgaaaccttgactcaagatcattctaatacagtgagatacagaaacgcacagaga
gaagacagtgagatcaagatgatccaggaaaaaaaagaacaagctgaaatgaaaaggaaa
gtccaagaggaggagttgcgagagaatcatccatatttcgataagccacttttcatagtt
ggtcgagaacacagattcagaaatttttgtcgggtggttgtgcgagctcgctttaacgct
tctaaaacagatcctgttaccggtgctgtgaaaaataccaaataccatcagctatatgat
ctgctgggattggttacatacctggactgggttatgatcattgttactatatgctcctgc
atttctatgatgtttgaatccccctttagaagagttatgcatgctccaacactccagatt
gctgaatatgtttttgtaatattcatgagcattgagcttaatctgaagattatggcagat
ggcttgttttttacaccaacagctgtcataagggactttgggggagtcatggatatattt
atatatcttgtaagtttgatattcctttgctggatgcctcagaacgttcctgctaaatct
ggagctcagctcttaatgatactacgatgtctccgaccccttcgcattttcaaactggtg
ccacaaatgaggaaagttgtacgagagctgtttagtggcttcaaggaaatcttcttggtg
tccattcttttgctgacattaatgcttgtttttgcaagctttggagttcagctttttgct
gggaaactggccaagtgcaatgatccaaacatcatcgcaagggaagattgtcatggcatc
ttcagaataaatgtaagtgtttcaaaaaatctgaatttaaagctaagacctggagagaag
aagcctggattttgggtgccacgagtctgggcaaatcctcgcaattttaattttgacaat
gtgggaaatgccatgttggcactctttgaagttctttcattaaaaggctgggtggaagtc
agagatgtcattattcatcgcgtggggccgatccatggaatctatattcatgtctttgtg
tttctgggctgcatgattggattgaccctctttgttggagttgtcattgctaatttcaat
gaaaataagggtacagctttactgactgtagatcagagacggtgggaagatctaaagagc
agactgaagatagctcaacctcttcatctcccacctcgtccggataatgatggctttaga
gcaaaaatgtatgatataacgcagcatccattttttaagaggactattgctgtgcttgtt
ctggcccagtctgtcttgctttcagtgaagtgggatgtcgaagatccagtgactgttcct
ttagcaacaatgtctgttgttttcaccttcatttttgtcctagaggtcacgatgaagatt
attgccatgtcacctgctggcttctggcaaagcagaagaaatcgatatgaccttttggtg
acctcccttggtgttatatgggtgatacttcactttgccttacttaatgcatacacatat
atgatgggtgcatgtgtaattgtcttcaggttcttctccatttgtgggaaacatgtgaca
ctgaaaatgctgctgctgactgtggttgtcagcatgtataagagtttcttcatcattgtg
ggaatgttcttactgcttctttgttatgcttttgctggagtagttttatttggcacagta
aaatatggagagaacattaacaggcatgcaaacttttcatcagctggcaaggctattact
gtactcttcagaatagttactggggaagactggaacaagattatgcatgactgcatggtt
cagcctcctttttgtactccagataacagcacatactggaagacagattgtggaaattat
gctggggctctgatgtatttctgttccttttatgtcatcattgcatacataatgctgaat
ttgcttgtagcgatcattgtggagaatttctcattgttttactccactgaagaagaccaa
cttttaagctacaatgatcttagacattttcagattatatggaatatggttgatgacaaa
agagagggggtaatccctaccttccgtgtgaagtttctgctgaggttgctgcgtgggagg
ttggaggtagatctggacaaggacaaacttttgttcaagcacatgtgctatgaaatggag
aggctgcataatggtggagatgtcactttccatgacgtattgagcatgctgtcatacagg
tctgttgatatccggaaaagtcttcaactggaagagcttcttgccagggaacaactagag
tacacgatagaagaagaagtggccaaacaaaccatacgcatgtggctgaagaaatgctta
aagcgtatcagagcaaaacagcagcagtcatgtagcattatccatagtctacgagagagc
caacagcaggaattgagccgatttctgaatccacccagcattgagacaacacagccaagt
gaagatatgaatgctaataatcaagataacaatgcacagccagagacaagtagccagcag
cagctccttagtccaacgctttctgacaggggcgggtatcggcaggactctacagatggt
gggaagcctcaacggaaattcggacaatggcgtttgccatcagcccccaaaccaatcagc
cattcagtgtcttcagtcaatctgcggtttggtggtcgtacaactatgaaatctgttgta
tgcaagatgaatcctatgtcagatgctgcttcttgtggatcagaagtgaagaaatggtgg
acaagacaactaactgtggagagtgatgagagtggggaggatcttcttgacatctga
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integrated database retrieval system
