Caretta caretta (Loggerhead turtle): 125638522 Help Entry 125638522         CDS       T09292                                  Name (RefSeq) helicase SRCAP isoform X1   KO K11661   helicase SRCAP/SWR1 [EC:5.6.2.-] Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ccay00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     125638522  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ccay03036]     125638522 Chromosome and associated proteins [BR:ccay03036]  Eukaryotic type   Chromatin remodeling factors    SRCAP complex     125638522    SWR1 complex     125638522 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA ResIII DEAD HDA2-3 DUF7091 Motif Other DBs NCBI-GeneID:  125638522 NCBI-ProteinID:  XP_048710358 LinkDB All DBs Position 6:11597323..11628650 Genome browser AA seq 3165 aa AA seqDB search MGSGIKGTGGKSGTGSGLPRERETVEVESDEEEEFSAHTGDSETGSPERRLGCQGTQELD SSSQRLLDQNEAGSQHALEQDDSTSATSKAIGARGEEQGSSKMQSHPPQQHHALRSEIAP DKMTGSNPVSPASSGSPASSGSVSPPHLTHDSSLDSHLGFDVPRLQSKALASPGVYASDP ASMWDKTHAEIAEQAKHEAEIENRIAEMKKEGFWSLKRLSKVPEPVRPKVHWDYLCEEMQ WLSADFAQERRWKRGVARKVVRMVIRHHEEQKQKEERAKREEQAKLRRIASSIAKEVKQF WSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQTEKYSDLLTQSLNETFPIASKTGSSS HISSSHAGSTTSSPPPPPHLTDEEDGDFQPHEESDDEETIEVEEQQEGNDSETHRREIEL LKQESELPLEELLQSLPAQILENSCSAAPSISSSNNEEEETARESEEEQEKAKSVMQRNK RPWKPDKEDEEFTANEEEAEDEEETIDAEEKLEGDMDHRKELDDLAQEGELPMEELLQRY AGAYASDFEMDESDSSSDASEPSTSEYEEESEDEDSSSQSDSTAEEESEEEEESQEEEEE EDTPAEEVTAVSREEDFGVEYLLKRDEDRGEGRNDAAPTLGPKKEITDIAATAESLQPKG YTLATTQVKTPIPYLLRGTLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLA HLACEKGSWGPHLIIVPTSVMLNWEMEIKRWCPSFKILTYYGAQKERKLKRQGWTKPNAF HICITSYKLVLQDHQAFRRKNWKYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPL QNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNESLVKRLHKVLRPFLL RRVKVDVEKQMPKKYEHVIKCRLSKRQRYLYDDFMAQATTKETLATGHFMSVINILMQLR KVCNHPNLFDPRPIHSPFITQGICFSTASLVLCALNRDPFKHVDMGIFDLINLEGRVSRY EADTFLPKWKVTRKLIEEIAESPDPPPRPKPVKMKVNRMLQPVPKPENRTVVLVNSPRPV APLQRPMAPVLPEALAPMHPMGPVLPGPVQPPLLPHPMAVPISLPLPLPPSPVPVPPAAR PQGPTLVPTLSQNNAAAAVLQAPVSAPQVLPTLMPAAQLVPNAPQPPVLPAPATAAAAAA ASTLKPGLVPAPAVRLATNPLNPGAVGSMMKPVTVHSTTSTLPGYNFPATSAVQQRLLLS PDMQARLPSGEVVSIAQLASLANRPLQSAPGSKPLTFQIQGNKLTLTGTQVRQVTMAQPR QLQRNVVHLVSAGGQHHIISQPAQVALIQAMTQQGGQAQGGVQAMSGPQPTTILPAPASA TTAATTSAAISVPIAATQVPSSMVNSSGVVKIVVRQAPRDGLVPAPALQQPPRPATATTL PSLPAALMAQRAQLPVAPMPPVRLPTQPLVPVRAPTPLQALVRPMIRVVQTQVPSMEQSA PAPAPPSPATAAPLPIPPATTIAAAVCPALAPRPAAAPSPVPKEEPETLMLRSTTPTPPP PSPRAPRHRRQPPPPPRSPFYLESLEEKRKKQKEERLDRLFRLNEQHCNLAPIYGTEVLR LCTLFPPSPPREQEEEGQEVAPELDGWRGASYSHCYVAQVHRDPQHLEMYWQRATAVAQA ILTPQQRVEQLADIIERFIFAMPPVEAPAITIHTSHPPPSLLLHQAIFKETLRREISPHA SGLHRIVCNMRTQFPDLRLIQYDCGKLQTLDLLLRQLKAGAHRVLIFTQMTRMLDVLEQF LNYHGHIYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDS DWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTT AYFKQQTIRELFEMPLDEPAKKEGEVLTMAQEDEEDPMANKQTQILEQALCKAEDPEDIR AATQAKAEQVAELAEFNENIPLDADERPSKEEEEEMSKAEQEIASLMEQLTPIERYAMNF LEASLEDISREELKQAEEQVEAARKDIDQAKDEVVFKLPDDEEEGRLSEEGYIKKSKKAK VPSRAGPERTGTRMSERLRGTRLSLREADGVDTESPQARLPSLRHLRGHHARLEAEEAED HLSLVAQHTRGAAIRRDLVREEMPVPTRKAAAKREESGTKVPGAGERVLRPIPHRTEAPF IGERVLRTSPQRPEPPATGDKVLRGTPQRAEPSATIERVLRAIPQRTDTPVPGDRVLRGA PQRAEPLAALERVLRSAPPRTDAPAPGDRVPRPAPLRPEAPPAGEQDLRPEAPGAGAKLL QPRPEAAPAREETPQPMLLAAEILGAPALLGHDSTAPTGELASKKPPAEHVLRVEPPPTW EKVLGSMELTTGAKMRSAEPSSASEKFPLPTPCNLEIPAPDKPVPSPETPASGEEPPEEA KGSLGKAEVAGELSRCPVELDSVDVKRGEPVRGTLEVPESQAPDGPAAELPPETRAHNAA RTGVEPPAAEPFSTTEDKVPGEAEPQPAWPLTGYLNQPVEAANSLPRLKTPPPSKEHNGL ERPSPLSNSVAEPQPRELAQGATEPLEMATGGSSSLKVVSKRGLEDREDKPKHPDRVRAA NTASLGMGEMQPGTTSSSDSPSPAKTPRRRTSADVEIRQNHQGQDGPAAKVLRKLPGRLV TVVEEKELIRRRRNRIHKLDTTGGTVVSPSSSSAHSISELELSPSSKELPLLRDLPARRR IELESRAAKERGDEGSGLELPPSLPPPPLKRKRGRPPKNKSPEQPSQGEAQPPPSTNVPR IRKPEIKTPEPSSPKTLKQPCKGEARPPPSTLKPRAQKLEPKAPEPVSPRSKTESSENDS PLEKRRRGRPPKAHWAPATPSTESPPKRKRGRPPKNPASPRVETAAPRPGSTSDRDTSAE KEPPPPGRKRRWRRKEEPGQAPSESSSDGEEARPLTRLARLRQEEKLESGSECSALLPSQ SAAPKPEPDGTSSGESSTSEQTPARSTRQRPGSLVPPLEQEHQRRKRGCLSEGGKSPGAA GSSEDDGGGESESSAELSGEEGERRPKRRRRHAGRATGSRRRPCPRGSSADRILRSAAAT PAGNTRSATGTTPGGVAGAPTPSATAAPAAMVTSSLSIRGRKPKT NT seq 9498 nt NT seq  +upstreamnt  +downstreamnt atgggttcaggaatcaagggcactggaggcaaaagtgggactgggagcggtcttccccgg gaaagagaaaccgtggaagtggagtctgacgaggaggaggagttctcagctcacacaggt gattcagagacaggcagccccgagcgcaggctgggctgccaggggacccaggagctggac agttcgtcccagcggttgcttgaccagaatgaggccggttcccagcatgcactggagcag gacgacagcacttcggccacgagcaaagctatcggggcgcgaggcgaagagcaagggagc agtaaaatgcagagccatcctccccaacagcaccatgcactgcgcagtgagattgcacca gacaaaatgacggggagcaatcctgtgtcaccggcctcttcggggtcacctgcctccagt ggcagcgtctcgccgccacacctcactcacgattcctccctggacagtcacctgggcttt gatgtgcccaggctgcaaagcaaagctctggcgtccccaggagtttatgcctcggacccg gccagcatgtgggacaagacgcatgctgagatcgctgagcaggccaagcacgaggcggag attgagaaccgcatcgcggagatgaagaaggagggcttctggtccctgaagaggctctcc aaggtgccggagccagttcgccccaaggtgcactgggattacctctgtgaggagatgcag tggctttcggcagactttgcccaggagcgacgctggaagaggggtgtggccaggaaggtg gtgcggatggtgattcggcaccatgaggagcagaagcagaaggaggagcgagccaagcgt gaggagcaggccaagctgaggcgcatcgcctcctccatcgccaaagaggtcaagcagttc tggagcaacgtggagaaggtggtgcagttcaagcagcagtctcgcctggaggagaagagg aagaaggccctggacctgcagctggacttcatcgtgggccagacagagaagtactcagat ctgctgactcagagcctcaacgagacgttccccatagccagcaagactggctcctcctcc cacatcagctcctcccacgccggctccaccacatccagtcccccgccacctccacacctc accgacgaagaagatggggacttccagccccatgaggagtcagacgacgaggagacgatt gaggtggaggagcagcaggaagggaatgactcggagacgcaccggcgtgagatagagctg ctgaagcaggagagtgagctgcccctggaggaactgctgcagtccctgcccgcccagatc ctggagaattcctgcagcgctgccccctccatctccagctccaacaacgaggaggaggag actgcgcgggagagtgaggaggagcaggagaaagcaaagtccgtcatgcagaggaacaaa aggccgtggaagcctgacaaggaggatgaggagttcacggccaacgaggaggaagctgag gatgaagaggagacgatcgatgctgaagagaagctggaaggggacatggatcacaggaag gaactggatgacttggcccaggaaggggagctgcccatggaggagctgctgcagagatat gccggcgcctacgcctcagactttgagatggatgagtctgatagctcctcggatgcctcg gagcccagcacctcggagtacgaggaggagtcagaggacgaggacagcagcagccagtca gactccaccgcagaggaggagagtgaggaagaggaggagagccaggaagaagaggaggag gaggatacccctgctgaggaagtgacggcggtgagccgggaggaagactttggcgtggag tacctgttgaaaagggacgaggatcggggagaggggcgtaacgacgcagcccccaccctg gggcccaagaaggagatcacagacatcgcagccactgccgagagcctgcagcccaagggc tacactctggctactacccaggtgaagacgcccatcccttacctgctgcgggggaccctg cgggagtatcagcacatcggcctggactggctggtcaccatgtacgaaaagaagctcaac gggatcctggcggacgagatggggctgggcaagaccatccagaccatctccctgctggct catttggcctgcgagaagggtagctggggtccccacctgatcatcgtgcccaccagcgtg atgctgaactgggagatggagatcaagcgctggtgccccagtttcaagatcctcacctac tatggggcacagaaggagcgcaagctcaagcggcagggctggaccaagcccaatgccttc cacatctgcatcacctcttacaagctggtgctgcaggaccaccaggcattccggcgcaag aactggaagtacctgattctggatgaggcccagaacatcaagaacttcaaatcccagcgc tggcagtcgctgctcaacttcaacagtcagaggcggctgctgctgacaggcacccccctg cagaacagcctgatggagctctggtccctcatgcacttcctgatgccccatgtcttccag tcgcaccgcgagttcaaggagtggttctccaatccactgacaggcatgattgagggtagc caggagtacaacgagagcctggtcaagcggctgcacaaggtgctgcggcccttcctcctg cgaagggttaaggtggatgtggagaagcaaatgccaaagaaatatgagcacgtcatcaag tgccggctgtccaagcgccaacgctatctctatgatgacttcatggcccaggccaccacc aaggagactctggccacagggcatttcatgagcgtcatcaacatcctgatgcagctgcgg aaggtctgcaatcaccccaacctcttcgacccccggcccatccactcgcccttcatcacc cagggcatctgcttcagcaccgcctccctcgtcctgtgcgccctcaaccgggaccccttt aagcatgtggacatgggcattttcgacctcatcaacctggaggggcgcgtgtcccgctac gaggccgacaccttcctgcctaagtggaaggtgacaaggaagctgatcgaggagatcgct gagtccccggaccccccgcccaggcccaagcctgtcaagatgaaagtgaacaggatgctg cagccagtgccaaagccagagaaccggactgtggtgctggtgaacagccctcgccctgtg gcccccttgcagagacctatggctcctgtgttgccagaggccctggcccccatgcacccc atgggcccagttctcccggggcccgttcagcctcccctgctccctcaccccatggccgta cccatctcgctgcccctgcccctcccaccatccccggtgccggtgcctcccgctgccagg ccgcagggcccaacgctagtgcctacgctgagccagaacaacgccgctgccgccgtgctc caggccccggtgtccgccccgcaggtcctgcctacactgatgcctgcggcccagctggtc ccgaatgccccccagccccctgtgctgccggcccctgccaccgctgctgctgctgctgct gcctccaccctcaagcccggcctggtgccagcccccgccgtgcggctagccaccaaccca ctgaacccgggcgccgtggggagcatgatgaagccagtgacagtccattccaccactagc accctgcctggctacaacttcccggccaccagcgctgtgcagcagaggctgctgctctcc ccggacatgcaggcccggctgccctcgggcgaggtggtgagtatcgcacagctggcctcg ctggccaaccggcccctgcagagcgccccaggcagcaagcccctcaccttccagatccaa gggaacaagctgaccctgacgggcacccaggtgcggcaggtcaccatggcccagccccga cagctgcaaaggaatgtagttcacctggtctctgccggggggcagcaccacatcatcagc cagcccgcccaggtggctctcatccaggccatgacccagcagggcggacaggcgcaaggc ggggtgcaggccatgtcaggcccccagcccaccaccatcctgcccgccccagcctctgcc accacggcagccaccacttcagcagccatcagcgtccccatagctgccacacaagtgccc tcctccatggtgaacagctctggtgtggtgaagatcgtagtgcggcaggccccgcgggac ggcctggtgcctgccccagccctacagcagcctccacgcccggccacagccaccaccctg ccgagcctgccggctgccctgatggcacagcgagcccagctccccgtggcacccatgccg cccgtgcggttgcccactcagccactggttccggtgcgggcacccaccccactgcaggcc ctggtgcgacccatgatccgagtggtgcagacacaagtgcccagcatggagcagtcggct ccagcaccggctccaccttctcctgccacggcggcccctctccccatcccccctgccacc accatcgctgctgctgtctgccccgcactggctccgcggcccgcagccgcacccagccca gtgcccaaggaggaacccgagacactaatgctacgctccaccacgcccaccccgcctccc ccgtcgccacgggccccacggcacaggcggcagccccctcccccaccccggtcacccttc tatctggaatcacttgaagagaagcggaagaagcagaaggaggagcgcctggaccggctt ttccgcctcaacgagcagcactgcaacctggcccccatctatggcaccgaggtgctgcgc ctctgcaccctcttcccacccagcccccctcgggagcaggaggaggaggggcaggaagtg gcaccagagctggatggctggaggggggccagctacagccactgctacgtggcgcaggtg catcgggacccccagcacctagagatgtattggcagcgggccacagccgttgcccaggcc atcctgaccccccagcagagggttgagcagttggcagacatcattgagaggttcatcttt gctatgcctcccgtggaggcgcctgccatcaccattcacacctctcacccgcccccgtca ctcctgctccaccaggccatcttcaaggagacgctgcggcgggagatctcgccccatgcc agcggcctgcatcgcatcgtctgcaatatgcgcacccagttccccgacctgcgcctcatc cagtacgactgcgggaagctccagaccctggacctgttgctgcgacagctgaaggccgga gcgcaccgggtcctcatcttcacccagatgacccgcatgctggacgtgctggagcagttc ctcaactaccatgggcacatctacctgcgcctggacggcagcacccgcgtggagcagaga caggcgctgatggagcgtttcaacgctgacaagcgcatcttctgcttcatcctgtcgaca cgcagcggaggcgtgggggtgaacctgacgggtgctgacactgtggtgttctacgacagc gactggaaccccaccatggacgcccaggcccaggaccgctgccaccgcatcggccagacc cgtgatgttcacatctacaggctgatcagcgaacggacagtggaggagaacatcctgaag aaggccaatcagaagaggatgctgggagacatggccattgagggtgggaacttcaccaca gcttacttcaaacagcaaaccatccgggaactcttcgaaatgcccttggacgagccggcc aagaaggaaggggaggtcctcaccatggcacaggaggacgaggaggatcccatggccaac aagcagacccagatcctggagcaggcgctgtgcaaggccgaggaccctgaggacatccga gcggccacacaggccaaggccgagcaggtggcagagctggccgagttcaacgagaacatc cccctggacgcagacgaacggcccagcaaggaggaggaggaggagatgtccaaggcggag caggagatcgcctcgctcatggagcagctcacccccattgaacgctatgccatgaacttc ctggaggcctctctggaggacatcagccgagaggagctgaagcaggcagaggagcaggtg gaggccgcccggaaggacatagaccaggccaaggatgaggtggtgttcaagctgcccgat gacgaggaggagggtcggctcagcgaggaaggctacatcaaaaagagcaagaaggccaag gtgcccagccgtgcaggcccagagcgcactggcacacgcatgagtgagcgactgcggggc actcgcctctccctgcgcgaggcagatggagtggacacagagtcgccccaggcccggctc cccagcctgcgccacctgcggggccaccatgccaggctggaggccgaggaggcagaagac cacctgtccctggtggcacagcacacacgtggcgcagccatccgcagggacctggtgcgg gaggagatgccggttccgacccgcaaggccgcggccaagagggaggagtcggggaccaag gttccaggggctggcgagagggtgctccggcccatccctcacagaacagaggcccccttc atcggggagagggtgctccggacctccccacagagacctgaaccccctgccaccggagac aaggtgctgcgaggcaccccccaaagagccgagccctcagccaccatagagcgggtgctc cgagccatccctcagagaacagacaccccagtccccggggacagggtgctacgaggcgcc ccgcagcgagcagagcccttggctgccctggagcgggtgttgcggagcgcccccccgaga acagatgctccagctcctggggacagggtgcctcgaccagccccactcagaccagaggca cctcctgctggggagcaggacctgagacctgaggcaccaggagctggtgcgaagctcctc cagccaagacctgaggcagcacctgccagagaggagaccccccagccaatgctcctagct gctgagatcttgggggcaccggccctgctagggcatgacagcacagcacccacaggggag ctagcctcgaagaagccccctgctgagcatgtgttgagggtggaacctccacccacttgg gaaaaggtgctgggatccatggagctcacgacgggggcgaagatgaggagcgcggagcca tcgtctgcctcagagaaatttcccctaccaaccccctgcaacctggagatcccagccccc gacaagccggtgccaagcccggagacgccagcctctggggaggagccacctgaagaagcc aagggatctttgggcaaagctgaggtagccggagagctgtcccgatgcccagtggaactg gacagtgtggacgtgaagaggggagagccagtcagaggtaccctggaggtgccggagagc caggcacccgatgggcccgcagcagagctcccaccagagacgcgtgcccacaacgctgct aggacaggggtcgaaccgcccgctgctgagcctttctccaccacagaggacaaagtgcca ggagaggcggagccccagccagcctggcctctcacgggctacctgaaccagcccgtggag gctgccaactccctgcctcgactgaaaacgccaccccccagcaaggagcacaacgggcta gagcggccttcccctctctccaatagcgtggccgagccccagcccagggagctggcgcag ggtgccacggagccactggagatggccactggtggcagcagcagcctgaaggtggtgtcc aagagggggctggaggaccgggaagacaagcccaagcacccagacagagtgcgtgcagcc aacaccgcctcgctggggatgggggagatgcagccagggacgacctcctcctcggacagc ccatcgccggccaaaacaccgcgccgacgcaccagcgctgacgtagagatccggcagaac caccagggccaggacggcccagctgccaaggtcttgcgcaagctgccaggccgcctggtt actgtggtggaggagaaagagctgatccgacgccggcgcaaccgcatccacaagctggac accaccggcggcaccgtggtgagccccagcagcagttcggcccacagcatctccgagctg gagttgtccccctccagcaaggagctgccgctgctccgtgacctgcccgcccgccgcagg attgagctggagagccgggctgccaaggagaggggagatgagggatctgggctggagctg ccccccagcctgcccccgccgcccctcaagcgtaaacggggccggccccccaagaacaag tctccagagcagccaagccagggggaagcacagccaccacccagcaccaatgtgccccgc atcaggaagccagagatcaagactcccgagccatcctcacccaagaccctgaagcagcca tgcaagggggaggcacggccaccgcccagcaccctgaagccacgtgcccagaagctggag cccaaggcccctgagccagtctcacccaggagcaagacagagagcagtgagaatgactcc cccctggagaagcgccggcggggccggccccccaaggcacactgggcccctgccactccc agcactgagtcaccccccaagcgcaagcggggccggccccccaagaacccagcttccccc cgtgtggagacagcagccccccgccctggctcaacttcggaccgcgacacctctgccgag aaggagccgcccccacctggccgcaagaggaggtggaggaggaaggaagagcctggccag gcccccagcgagagctcgtcagatggcgaggaggcccggcccctcacccggctggcccgt ctccggcaggaagagaagctggagtcgggcagcgagtgctcggccctgctcccatcccag agcgctgcccctaagccggagccggacggcacctcgtcaggggagagcagcacctccgag cagaccccagcccgctccacccgccagcgccctggcagcttggtgccaccgctggagcag gagcaccagaggcgcaagcgggggtgcttgtcagagggcggcaagtcccccggggctgcc ggctcatcggaggacgacgggggcggcgagtcggagtcatcagcagagttgagcggcgag gagggcgagcggcggcccaagcgccgccgccgccatgcaggccgagccaccggcagcagg aggcggccgtgcccccgaggcagttcggccgaccgcatcctgcgaagcgccgctgccacc ccagccggcaacacccgctcggccaccggcaccacgccggggggggtggctggagccccc accccctcggccaccgctgctcctgccgccatggttacctcctcactaagtatcagaggc cgcaagcccaaaacgtga

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