Caretta caretta (Loggerhead turtle): 125638587
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Entry
125638587 CDS
T09292
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03022
Basal transcription factors
ccay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125638587 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
125638587 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125638587 (MNAT1)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125638587 (MNAT1)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125638587 (MNAT1)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125638587 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-C3HC4
DUF3292
zf-UDP
Motif
Other DBs
NCBI-GeneID:
125638587
NCBI-ProteinID:
XP_048710499
LinkDB
All DBs
Position
6:complement(113733605..113921121)
Genome browser
AA seq
357 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGAGNCQECDTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKVYNKREDDFPSLTEYNDFLEEVEEIVFNLTNNVDLENTKK
KMDNYQKDNKEVIQKNKIKLTREQEELEEALEVERQENEQRRLFIQKEEQMQQIIKRKNK
QALLDELESSHLPASLLLAQHKDRSTKLEMQLEKPRPVKPVTFSTGIKMISKPCPSYLST
GSCWGLHFLPCLSPSPTGCFQWPFLASQLACIHRPVSSGFWSGARSKSSKPPVKLLPSAL
SLTCCHLFHIYIKYLSTAGFTKGFCFVFLSLHKSFVKWWIHFCRRGTLVMWYFAERG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccagggctgcccgcggtgcaagaccaccaagtaccggaacccttccctgaag
ctgatggtgaatgtctgcgggcacacgctatgcgagagttgtgtggagctgctgtttgtc
cggggggccggaaactgtcaggagtgtgataccccgctgcggaaaagcaacttcagagtg
cagctctttgaagaccctgccatcgacaaggaggtggaaattcggaagaaagtattgaaa
gtatacaataaaagagaagatgactttcccagtctaacggaatataatgatttcctggaa
gaagtagaagaaattgtgtttaacttgacaaacaatgtggatttggagaacaccaaaaag
aaaatggataattaccagaaggataacaaagaagtcattcagaaaaacaagataaaactg
actcgggagcaagaggagctggaggaagctttagaagtggaacgacaggaaaacgagcaa
aggcgactgttcatacagaaagaggaacaaatgcaacagattataaaaaggaagaataaa
caggcacttctggatgaactggaaagttcccatctgccggcctccctgctcttagctcaa
cataaagacagatctactaagctagaaatgcagctggaaaaacccagaccagtcaaacca
gtcacattttccactggcatcaaaatgatatctaaaccatgtccgagctacctctccaca
ggatcttgctgggggctacacttcctcccttgcttgtcaccgagccctacaggatgcttt
cagtggccttttctggcatcccagctagcctgcatacaccgccctgtgagcagtggattc
tggagtggagcaaggagcaagtcaagcaaacctccagtgaaactgctgccatctgcacta
tcgttaacctgctgtcacctttttcatatatatataaaatacttaagcacagctggcttt
actaaaggtttttgttttgtttttttaagtctgcacaagagctttgtaaagtggtggata
catttttgcagaaggggaactctagtcatgtggtactttgctgagaggggctga
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