Caretta caretta (Loggerhead turtle): 125638677
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Entry
125638677 CDS
T09292
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
ccay03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125638677 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
125638677 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125638677 (THOC6)
03041 Spliceosome [BR:
ccay03041
]
125638677 (THOC6)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125638677 (THOC6)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125638677 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_NOL10_N
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_Vps41
DSE1_N
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
PAC11
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_EIPR1
TRM82_WD
Beta-prop_WDR41
ASA1
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
125638677
NCBI-ProteinID:
XP_048710716
LinkDB
All DBs
Position
6
Genome browser
AA seq
315 aa
AA seq
DB search
MTVFSQSVSPCGKYLAAGNNYGEIAIFSLSAALSSEAKEESKKPVVSFTAHDGPVYAMVS
TERQLLSSGNGELKAWNWSDIVKKGCKEAWSRRPPYRSSLEVPEINSLQLNPKDNSLLLA
GGDCAVHAMDLESGAFTEFRGHSDYVHCLALRDQAQECLSGSEDGTVRMWDLRTGAQVQL
IEVHKYEECSRPQLGKWIRCLATDCDWMVCGGGPALTLWHLRSVTPTTVFPLPHCQQHVM
FYQDLILSAGHSPAINHLQISGEIRAQIPCTPRSVHSLCVNERSPEHKVLTAAGSSHKVD
VFTNFSYRAFSLCFA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttttctcccagagcgtctcgccctgcggcaagtacctggcagctgggaacaac
tatggggagatcgccatcttcagcctctcggcggcgctgagctccgaagccaaggaggag
agcaagaagccggtggtgtccttcacagcccacgacgggccggtctacgccatggtctcc
accgagcggcagctgctgagttccggcaacggcgagctcaaggcctggaactggagcgac
atcgtcaagaaggggtgcaaggaagcctggagccgcagacccccgtacaggagcagcctg
gaggtgcccgagatcaacagcctgcagctgaaccccaaggataacagcctcctgctggcc
gggggcgactgcgccgtgcacgccatggacctggagtccggcgccttcaccgagtttcgg
gggcacagtgactacgtccactgcctggcgctgcgggaccaggcccaggagtgcctgtcg
ggcagcgaggacggcaccgtgcgcatgtgggatctacgcaccggggcacaggtccagctc
atcgaagtgcacaaatacgaggaatgcagccggccccagctcgggaagtggatccgttgc
ctggcaacagactgtgactggatggtgtgcggggggggcccggcgctcaccctctggcac
ttgcgctccgtgacccccaccacggtcttccccctgccccactgccagcagcacgtcatg
ttctaccaggacctgatcctctccgcaggacacagcccggccatcaaccacctgcagatc
agtggggaaatcagggctcagatcccctgcacgccccgctccgtccactcgctctgtgtc
aacgagcgctcccctgagcacaaggtgctgacggccgctgggagcagccacaaagtcgac
gtcttcaccaacttcagctaccgggccttctccctctgcttcgcttag
DBGET
integrated database retrieval system
