KEGG   Caretta caretta (Loggerhead turtle): 125638753
Entry
125638753         CDS       T09292                                 
Symbol
NFKBIA
Name
(RefSeq) NF-kappa-B inhibitor alpha
  KO
K04734  NF-kappa-B inhibitor alpha
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04210  Apoptosis
ccay04620  Toll-like receptor signaling pathway
ccay04621  NOD-like receptor signaling pathway
ccay04622  RIG-I-like receptor signaling pathway
ccay04623  Cytosolic DNA-sensing pathway
ccay04625  C-type lectin receptor signaling pathway
ccay04920  Adipocytokine signaling pathway
ccay05132  Salmonella infection
ccay05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125638753 (NFKBIA)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    125638753 (NFKBIA)
   04621 NOD-like receptor signaling pathway
    125638753 (NFKBIA)
   04622 RIG-I-like receptor signaling pathway
    125638753 (NFKBIA)
   04623 Cytosolic DNA-sensing pathway
    125638753 (NFKBIA)
   04625 C-type lectin receptor signaling pathway
    125638753 (NFKBIA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125638753 (NFKBIA)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    125638753 (NFKBIA)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125638753 (NFKBIA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccay03000]
    125638753 (NFKBIA)
   04131 Membrane trafficking [BR:ccay04131]
    125638753 (NFKBIA)
Transcription factors [BR:ccay03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Ankyrin only
    125638753 (NFKBIA)
Membrane trafficking [BR:ccay04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    125638753 (NFKBIA)
SSDB
Motif
Pfam: Ank Ank_2 Ank_3 Ank_5 Ank_4 ANK_LRRK2
Other DBs
NCBI-GeneID: 125638753
NCBI-ProteinID: XP_048710800
LinkDB
Position
6:complement(80214274..80218756)
AA seq 325 aa
MLHPSCSPGGRRDLAMESRAEPLKKERQLGLLQDDRHDSGLGSMKEEEYELLVKELTDIR
LQPQEEPGATHQPAQPWQQQVTEDGDTFLHLAIIHEEKSWSVEVIRQVAANPAFLNFQNN
LNQTPLHLAVITDQVEIAEILLKAGCDPEIRDFRGNTPLHIACEQGSLRAVGILTQYCPQ
HHLYSVLQSANYNGHTCLHLASIHGYLAIVEYLLCLGADVNAQEPCNGRTALHLAVDLQN
SELVSLLVKHGADVNKVTYQGYSPYQLTWGRDSFSIQEQLKHLTTADLQMLPESEDEESC
ESESEFTEDEIMYDDCVIGGQQLAF
NT seq 978 nt   +upstreamnt  +downstreamnt
atgttgcaccccagctgcagcccggggggccggcgggacttggcgatggagagccgcgcc
gagccgctgaagaaggagcggcagctcggcttgctgcaggacgaccggcacgacagcggg
ctgggctccatgaaggaggaggagtacgagctgctggtgaaggagctgacggacatcagg
ctccagccccaggaggagccgggggcgacgcaccagccggcccagccttggcaacagcaa
gtgactgaagacggagacacatttctccacttggcaattattcacgaagaaaagtcctgg
agcgtggaggttattcgccaggtagctgccaatcctgccttcctgaactttcagaataac
ctaaaccagactccacttcacctggcagtaatcacagatcaggttgaaattgctgagatc
cttctcaaggccggatgtgatccagagatcagagacttccgaggaaatacaccacttcat
attgcctgtgagcagggctctctcagagctgtcggcatcctcactcagtactgcccgcag
caccacctatattcagtcctacagtctgccaactataatgggcacacatgtctccatttg
gcatctattcatgggtatctggctatagtagaatatttgctgtgcttgggagcagatgtc
aatgctcaggagccttgtaacggcagaactgccctccacttagctgtagacctgcagaat
tcagaactggtgtcgcttctggtaaaacatggggctgatgtgaacaaagtgacctaccag
ggctattctccataccagctcacgtggggaagagacagcttcagcatacaggaacagctg
aagcacttaaccacggctgacctacagatgctaccagaaagtgaggatgaggagagctgt
gaatcagaatcagaattcacagaggatgaaataatgtatgatgactgtgtaattggagga
caacagttggcgttttga

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