Caretta caretta (Loggerhead turtle): 125638781
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Entry
125638781 CDS
T09292
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125638781 (UBR1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125638781 (UBR1)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
125638781 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Not3
Motif
Other DBs
NCBI-GeneID:
125638781
NCBI-ProteinID:
XP_048710852
LinkDB
All DBs
Position
6:62258719..62403562
Genome browser
AA seq
1761 aa
AA seq
DB search
MADGGGGGAGSGAAAGASGGIPVPPQERAMWWDERVDFQAAFLQQLAKYVPNIYSGEMDP
LLEKQEEMAQITIFDPLEWYLFGEDPDVCLEKLRQCGASQLCGKVFKGGETTYSCRDCAI
DPTCVLCMDCFQNSIHKNHRYKMHTSTGGGFCDCGDTEAWKTGPLCVNHEPGAASTTKAN
SECQLNEELMAQAKKMFPSVLKYIVDMTIWEEEKELPPVLMTSREKTDHYYCVLFNDEHH
SYDHVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKEGPYVSCQEAKEEIKRHSENVSQR
PLHVEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEADSEKPCLISMLM
LWDAKLHKGARKILHELIFSSFFMEMEYKKLFAIEFVKYYKLLQKEYISDDHDRSISVTA
LSVQIFTVPTLARHLIEEQTVITIITETLLEVLPEYLDKNEKFNFQGYSQDKLGRVYAVI
CDLKYILITKPTVWTDRLRVRFLEGFRSFLRILTCMQGMEEIQRQIGQHIEVDPDWEAAI
AIQMQLKNILLMFQEWCACDEDLLLEAYKECHTAVMRCSTSSRSREKTVLQLCGHTLESK
RYRVSVDPVSIHLPLSRTLAGLHVRLSKTEAISRLQEFVPSEQFQVELLVEYPLRCLVLV
AQVAAEMWRRNGLSLISQVFYYQDVKCREEMYDKDILMLQIGASLMDPNLFLLLILQRYE
LVSAFKKIMPTKDQDLTKQCNILIEEMLQVLIYVVGERYVPGVSSVTKEEITMREIIHLL
CIEPMAHSAIAKSLPENENNETGLEKVINKVAIFKKPGVSGHGVYELKDECMKEFNMFFY
HYTKTQHSKAEHTQKKRRKQENRDEALPPPPPPEFSPAFSNVVKILNCDIMMYILRTILQ
RAVQLETHLWTEAMIQMVLHLLSLGLLEEKQQLEKAPEEEVTFDFYHKASRMGSSALNAL
NILMLLEKLKSVPQLEAQKDMINWILQMFDTVKRLREKSSLATAATTSGSETTKGNETQS
TQDKEKAERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTQETQGREDSVMEEES
IPLAIESSRVALGPKRGPSVTEKEVLTCILCQEEQEVRLESAVMVLSACVQKSTALTQHR
GKTLELSGDTLDPLFMDPDLSCGTHTGSCGHVMHAACWQKYFEAMQLNSRQRLHVEQIFD
LENGEYLCPLCKSLCNTVIPIIPLQTQKINSEDAEAVAQVLSLARWLEIVMARILGYSLK
NTKGEKQNTPSLISKGMGDFTSEFHSILSFGVQPSAKYSNSIKEMLVFFATTIYRVGLKI
APNEADPRIPLMTWSTCAFTIQCIENLLEDEGKPLFGSLQNRQHSGLKALVQFAVAQRTT
SPQSLIQKHLIRLLAVLLPNLKMEDTPSILDVDMFHILVGAVLSFPSLYWEDTVDLQPSS
VSSAYNHLYLFHLITMAHITQILLTSATESPTAQSQDNSEETHTAESFCREVCQYTSGCF
SHDVPGWHLWDCVKKGITPYLRCAALFFHFMLRVSPPEDLLLVSEEGEFKALCSYLSLPT
NLFLLFEEYWGTVSPLLQRWCADPAVLSFLKGKNISVRYPRKRNNLIELPEDYSCLLNQA
SQFRCPRSFDDERKHPMLCLFCGTMLCSQNTCCQELVNGEELGACTSHALHCGAGVCMFL
KIRECKVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCHERYRKLHLLWQQHCII
EEIARSQETNQIFFGFNWQLL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggcggtggaggagccggatcaggagcggcggcgggagcgagtggtggg
atccccgtgccgccccaggagcgggccatgtggtgggatgagagagttgactttcaggct
gcctttttacaacaactggcaaagtatgttccaaacatctactctggtgaaatggacccc
ttgctggagaagcaggaagaaatggcccagataaccatatttgaccctctggagtggtac
ttgtttggggaagacccggatgtctgcctggagaaactgcggcagtgcggagcttctcaa
ctctgcgggaaggtgttcaaaggtggggagactacatattcttgcagagactgtgcaatt
gatccgacatgtgtactctgcatggactgctttcagaatagcattcacaagaaccatcgt
tacaagatgcatacttccactggaggagggttttgtgactgtggggatacagaggcatgg
aagactggaccactttgtgttaaccatgagcctggagcagcaagcactacaaaagcgaat
tctgaatgccagttaaatgaagaactaatggcacaagcaaagaagatgttcccgtcggta
ttaaaatacattgtagatatgactatctgggaagaagagaaggagttgcctcctgtgctc
atgaccagtagagagaagacagaccactactactgtgtccttttcaatgatgaacatcat
tcttatgaccatgtcatctacagtctccagagagcgcttggttgtgagctcggggaagcc
cagttgcacactactgccatagataaagagggtcgtagggctgttaaagagggaccttat
gtatcctgtcaggaagcaaaggaagaaatcaagaggcactctgagaatgtctcccaacga
ccgcttcatgtggaggttctgcatgctgatgttatggctcatcagaaatttgctttgcgt
cttggttcttggttgaacaaacttatgagctattcaagtgacttccgccagatcttctgt
caaatatgcctcaaagaggaagctgactctgaaaagccctgcctcataagcatgttgatg
ctttgggatgcaaaacttcataaaggggcaaggaagatccttcatgaacttattttcagc
agttttttcatggaaatggagtacaaaaaactttttgctattgaatttgtcaagtattac
aagctgttgcaaaaagaatacatcagtgatgaccatgatagaagtatctcagtgactgca
ctctcagttcagatattcactgtacccactctggcacgccatcttattgaagagcaaact
gtaataaccataatcacagagacactactagaagtgctgccagagtacttggacaagaat
gagaagttcaacttccagggttacagccaggacaaactgggtcgggtgtatgcagtcata
tgtgacctcaaatatatcttaatcactaagcctacagtgtggacagacagactgagggta
cggtttttggaaggattccggtctttcttgagaattctgacttgtatgcaggggatggag
gagatacagagacagattggtcaacatatcgaggtggacccagattgggaagcagccatt
gccatccagatgcagctgaagaacattcttttgatgttccaagagtggtgtgcctgtgat
gaagacctgttgctggaggcttacaaagagtgccatacagctgtgatgaggtgcagcaca
agtagccgttcacgggagaagacggtgcttcagttatgtggccacactctggaaagcaaa
cgttacagagtgtcagtagatcctgtcagcatacacctgccactgtccaggacgcttgca
ggcctacacgtacgattaagcaagactgaagcaatctcaagactgcaggagtttgtgcct
tctgaacaattccaagtggagctgctagtggaatatcctttgcgctgtctagtgttggtt
gctcaggttgctgcagagatgtggagaaggaatgggctctccctaataagccaggtgttc
tattaccaggatgttaaatgtagagaagaaatgtatgataaagacatccttatgctgcag
attggtgcatcgcttatggatccaaaccttttcctgttgctgatactacagaggtatgag
cttgtcagtgccttcaagaagatcatgcccaccaaagaccaggatttgaccaagcaatgt
aatatattaatagaagaaatgctgcaggttctcatctatgttgtgggggaaagatacgtg
cctggagtgagtagtgtgacaaaagaagaaattaccatgagagaaattattcatctgctc
tgcattgaaccaatggctcacagtgctattgccaaatctttgcctgagaatgaaaacaat
gaaactggcttggagaaagtaataaataaagtggccatattcaagaaaccgggtgtgtca
ggccatggagtttatgaattgaaggatgaatgcatgaaagagttcaatatgttcttttat
cactataccaagactcagcacagcaaggctgaacatacgcagaagaagagaagaaaacaa
gaaaacagagatgaagcactgccacctcctccccctcctgaattcagcccagcattcagc
aatgtggtgaaaattctgaactgtgatatcatgatgtatatcctcagaactatccttcaa
agggcagtacaactggagacccacttatggactgaagctatgatccagatggtacttcac
ctcctttctctgggcttactggaagagaagcagcagctagaaaaggctccagaggaagaa
gtgacctttgacttttatcacaaagcatcaagaatgggaagctcagccttgaatgctctg
aacatactaatgcttctggaaaaattaaaatcggttcctcagttagaagcgcagaaggat
atgatcaactggatactgcagatgtttgacacagtgaaacgattgagagagaaatcaagt
ttggcaacagcagcaactacatcaggatcagaaactacaaaaggcaatgagactcagagc
actcaagacaaagagaaggctgaacggaagaggaaggcagaagctgccaggctgcatcgc
cagaagataatggcccagatgtctgctttacagaggaatttcattgaaactcataaactc
ctgtatgaaaacacacaagagacacagggaagagaggactctgttatggaggaggagagc
atacctttggccattgagtcttccagagttgccttgggacccaaacgaggtccatctgtt
actgagaaggaagtgctgacctgtatcctatgtcaggaggagcaggaagtgaggctggag
agtgctgtgatggtattatcagcttgtgtccagaaatccactgccttaactcagcacagg
gggaaaactcttgaactctcaggtgatacattagatcctcttttcatggatccagatttg
tcatgtggaacccatacaggaagctgtggtcatgtaatgcatgcagcctgctggcagaag
tacttcgaagccatgcaactgaattctcgacagcgtcttcatgttgaacagatttttgac
ttggagaatggagaatacctttgcccgctctgcaagtctctgtgcaacactgtgattccc
attattcctttgcagactcagaagataaacagtgaggatgcagaggcagtagctcaagtt
ctgtccctggctaggtggttggagattgtcatggccaggatattggggtacagtctgaaa
aacactaaaggagagaagcaaaatactccatctttaatcagcaaaggaatgggagacttt
acttcagaattccattccatccttagttttggagttcagccttcagccaaatactcaaac
agtattaaggagatgctggttttctttgccaccactatttacagagttggattaaaaatt
gctcccaatgaggctgatcctcgcattcctctgatgacttggagcacgtgtgcttttact
atccaatgtatagaaaaccttctagaagatgagggcaaacctttatttggatctctgcaa
aataggcagcacagtggccttaaagcattagtgcagtttgcagttgctcagaggactaca
tcaccgcaaagcctgattcagaaacatctgattcgtctcctagcagttcttctgccaaac
ttaaaaatggaagacacgccgtccattctagatgtagatatgtttcacattttggtaggt
gctgtgttatcattcccatctttatattgggaggatactgtagacttgcaaccttcatct
gttagctctgcctataatcacctctacctcttccatttgatcactatggcacacataaca
cagatccttctgacttctgcaacagaatcccccactgctcaatcacaagataatagtgag
gagactcatactgctgagtctttctgtagagaagtttgccagtacacaagtggctgcttt
agccatgatgttccaggctggcatctgtgggactgtgttaagaaagggatcacaccttac
cttcgttgtgctgctttgtttttccatttcatgctgagagtgtctccacctgaggacctg
ctgttagtttccgaggaaggagaattcaaggccctctgtagttatttatctctacccaca
aatctgttcctgctttttgaggaatattggggcactgtaagccccttgctccaaaggtgg
tgtgctgaccctgctgtactaagttttcttaaagggaaaaacatttcagtaagatatcca
aggaaaagaaataatttgatagagcttccagaagactacagttgcctcctgaatcaagcc
tctcagtttaggtgcccacggtcttttgacgatgaacgaaagcacccaatgttgtgtttg
ttctgtggaaccatgctgtgctcccagaatacctgctgccaggagttggtgaatggggag
gagctgggagcctgtacctctcatgctctccattgtggagctggagtgtgtatgttcctc
aaaatcagggagtgcaaagtagtcctgatagaaggtaaaaccagaggctgcttatatcct
gctccctatcttgatgaatatggagaaacagacccaggcttgaaaagaggcaaccctctg
catttatgtcatgaacgttaccggaaactgcatcttctatggcagcaacactgcatcata
gaagagattgccaggagccaggaaaccaatcaaatcttctttggattcaactggcagctg
ctctga
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integrated database retrieval system
