KEGG   Caretta caretta (Loggerhead turtle): 125638866
Entry
125638866         CDS       T09292                                 
Symbol
RIOX1
Name
(RefSeq) ribosomal oxygenase 1
  KO
K16914  protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccay03009]
    125638866 (RIOX1)
   03036 Chromosome and associated proteins [BR:ccay03036]
    125638866 (RIOX1)
Enzymes [BR:ccay01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     125638866 (RIOX1)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125638866 (RIOX1)
    1.14.11.79  protein-L-histidine (3S)-3-hydroxylase
     125638866 (RIOX1)
Ribosome biogenesis [BR:ccay03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    125638866 (RIOX1)
Chromosome and associated proteins [BR:ccay03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125638866 (RIOX1)
SSDB
Motif
Pfam: RIOX1_C_WH JmjC_2 Cupin_8 Cupin_1
Other DBs
NCBI-GeneID: 125638866
NCBI-ProteinID: XP_048711068
LinkDB
Position
6:61916269..61918767
AA seq 584 aa
MEAAARVSALWVYRSAAGPGLSVSLRSRRIKKRPKQSKRGVPGDCPAPAGPGKGEQLGAP
LPGRGAAGGKLGRSRKGKQREGYLAPMQSQTSGLQGIPRPQLAGVAPMGAVRGASSPRPQ
EPITGPSLHGLLQELGRVQHSRQRAAKLFEWLIAPISPQQFFEQSWEKKPLLIQRHNPGY
YQGLFSTATFDAILRDNDVQFGVNLDVTSYVDGTRETHNPAGRALPAVVWDFYRNGCSLR
MLNPQAFSTTVWHFLSILQEQFGSMAGANTYLTPAGTQGFAPHYDDIEAFVIQLEGKKHW
RVYGPRNDAEVLPQFSSCNFAQEVIGEPILETILEAGDLLYFPRGFIHQGDCLPDAHSLH
ITVSSYQRNSWGDLLEKLLPTALQMATEEDVEYRQGLPIDYLEYMGVLNSDVVDSRRGAF
IERVQNLIKKLVDYAPIDAAVDQKAKLFLHDCLPPMLTEHERALSIHGVPARWEDGDVRD
ADIPIKKGTQVRLLRQGIIRLCNEGNGLLLYYTTENSRVYHKEEPKYLEIDPEFTDGIEF
LLSSYPKYVCVETLPCDTLDDKISLATFLFEKGLLITKKPLVPI
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggaggccgccgcacgtgtctccgcgctctgggtctatcgctccgcggcgggccccggg
ctctcggtctccctgcggagcaggcgcataaagaagcggcctaagcagagcaagaggggg
gtgcctggggattgtcccgctccagcggggcccgggaagggggagcagctcggagcccct
ctacccggccggggcgcagcaggaggaaagctgggaaggagccggaaggggaagcagaga
gaggggtacttggcccccatgcaaagccaaacttcggggctgcagggaatccccagaccg
cagctggcaggggtggcaccaatgggagcagtgaggggagctagcagcccaaggccccag
gagcccatcactggcccctctctgcatggccttctccaggagctgggtcgggtccagcac
agcaggcagcgggcagccaagctgtttgagtggctgattgcgcccatctccccacagcag
ttctttgagcagagctgggaaaagaaacctctcctgatccagagacacaacccaggatac
taccaggggctcttctccacagccaccttcgatgcaatcctgcgggacaatgatgtccag
tttggggtcaacttggatgtaacaagctatgtggatgggacaagggaaacccacaatcct
gctggcagggcgctgcccgctgtcgtatgggatttctacaggaatggctgttccctgcgg
atgctgaacccacaggccttctccaccacagtttggcacttcctctccatccttcaggag
caatttgggagcatggctggagcaaacacatatctgacacccgcgggcacacagggcttt
gctccacactacgatgacattgaagcttttgtgatccagcttgaagggaagaagcattgg
cgggtttatggtcctaggaatgatgcagaggtgttgccacagttctcgagctgtaacttt
gctcaggaggtgattggagagcccattctggagacaatactcgaagctggggacctgctt
tatttcccccgtggatttatccatcagggggactgtcttcctgatgcacactcactccac
ataactgtttcttcataccagaggaactcctggggagatctgctggagaaactcctccca
acggccttgcagatggccacagaggaggatgtggagtacaggcaagggctccctatagat
tacttagaatatatgggggtcctgaactcagatgtggttgattctcgccgaggtgctttt
atagagagagtacagaatttgataaagaaactggtggactatgcaccaattgatgctgcg
gtggatcagaaagctaagttgtttcttcatgactgcctccctcccatgctaactgaacat
gaaagggcactgagtatacatggtgttccagccaggtgggaagatggagatgttcgtgat
gctgatataccgataaagaaagggactcaggtacggctgctccgtcagggcatcattagg
ttgtgtaatgaaggaaatggtttgctgctgtattacacaacagaaaactcaagagtgtac
cacaaggaggagcccaagtacttggagatagatcctgagtttacagatggtattgaattt
ctgctttcttcgtatccaaagtatgtctgcgtggagacccttccatgtgacaccttggat
gataaaatctccttagctaccttcttgtttgaaaagggcctgctgattaccaagaaacct
ctggtgcctatataa

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