Caretta caretta (Loggerhead turtle): 125639062
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Entry
125639062 CDS
T09292
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta isoform X1
KO
K17301
coatomer subunit beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125639062 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125639062 (COPB1)
Membrane trafficking [BR:
ccay04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125639062 (COPB1)
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125639062 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
125639062
NCBI-ProteinID:
XP_048711462
LinkDB
All DBs
Position
6:25791356..25879059
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AA seq
993 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRLLIVEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVTVGPTQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYMALVQEKKKQNSFIAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMNSKEDQFQLSLLAAMGTTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQVFSLVQQGRTGDPIRHQGIWVAHSVM
RSTSLMECPCLLKAVLSVLCCITLVTDSHPMIN
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcagagaatgtatgttatacgttgattaatgttccaatggattcagaacca
ccatctgaaatcagcttaaaaaatgacctagaaaaaggagatgtaaagtccaagacagag
gccttgaagaaagtaattatcatgatcctgaatggtgaaaaactacctggacttctgatg
actattattcgttttgtactgcctcttcaagatcataccatcaaaaaactgctgttagtc
ttttgggagatagttccgaagaccactccggatggcaaactgttgcaagaaatgatcctt
gtatgtgatgcctatagaaaggatcttcagcaccccaatgaatttatccggggttctact
cttcgttttctttgcaagctgaaagaagcagaattactggaacctttgatgccagctatt
cgtgcatgtttagaacatcgtcacagctatgtgcgcagaaatgcagtcctggcaatctac
acaatttacagaaactttgaacatcttatacctgatgctcctgaattgatccatgatttc
ctggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgcatagaccaagtccagacatttggt
gacattcttcagctggttattgttgaactaatttacaaggtctgccatgctaatccatca
gaaagagctcgatttatacgctgtatttacaacttattgcaatcatctagtcctgcagta
aaatatgaagcagcaggaacactagttacactctccagtgcaccaacagcaatcaaggca
gcagctcagtgttacattgacttgattattaaagagagtgataacaatgtgaaactgatt
gtactggatcgcttgattgagctgaaagagcatcctgctcatgaacgagtgttacaagat
ctggttatggacatactgagagtgctgagtactccagatttagaagtgcgcaagaaaacc
cttcagttagctctggatcttgtatcttctagaaatgtggaagagctggtgattgttttg
aagaaagaagtgattaaaacaaacaatgtgacagagcatgaagatactgacaaatacagg
cagttgcttgttcggacactgcattcctgcagcgttcggtttccagatatggctgcaaat
gttattcctgtgttgatggagttcctaagtgataataatgaagctgcagctgctgatgtc
ttggaatttgtgcgtgaagcaattcagcggtttgataatctcagactacttattgttgag
aagatgctggaagtctttcatgccattaaaactgtcaagatttacaggggagctttgtgg
atccttggagaatattgcagcacaaaggaagatatacaaagtgtaatgacagaagtccgc
aggtcgctgggagagatcccaatagtggaatctgaaataaagaaagaagctggtgaactg
aaaccagaagaggaggtgactgtaggtccaacccaaaaattggtgacggagatgggcacc
tatgctacacagagtgccctcagtagttcccgacctgccaaaaaggaagaagatagacct
ccattacgaggatttttgttggatggggatttctttgttgctgcttcccttgccacaact
ttgactaagattgctctacgctatatggctcttgttcaggaaaagaagaaacaaaattct
tttattgctgaggctatgttgctaatggccactattctccatttgggtaagtcctctctt
cccaagaagccaattacagatgatgatgtggatcgtatctccctatgtctgaaggttttg
tcagagtgttctcctctaatgaatgatattttcaacaaggaatgcagacagtccctttct
catatgctgtcagctaaactagaagaggagaaactttctcagaagaaagagtcagagaag
aggaatgtgacaattcagccagatgaccccatttccttcatgcagcttactgctaaaaat
gaaatgaactcaaaggaagaccaatttcagctgagccttctggcagcaatggggaccacg
caaagaaaagaagctgctgatcccttggcatccaaactcaacaaggttactcagttgaca
ggtttctcagatcctgtctatgcagaagcatatgttcatgtcaaccagtatgatattgta
ttggatgtgcttgtagtaaaccagaccagtgatactttgcagaactgcacattagaacta
gccacactaggtgacttgaaattagtggaaaaaccatctcctttgacgcttgctcctcat
gattttgcaaacattaaggctaatgtcaaagtagcctcaacagaaaatggtatcattttt
ggtaatattgtgtatgatgtatctggagcagccagtgacagaaactgtgttgtcctcagt
gatattcatattgacatcatggattacatccagcctgcttcttgtactgatgcagagttc
cgccagatgtgggcagaatttgaatgggaaaacaaagttacagttaatacaaacatcatt
gatctaaatgaatacttacagcacatactaaaatcaaccaacatgaaatgccttacccca
gagaaggcactttctggttactgtggctttatggctgccaatctgtatgcacgttccata
tttggagaagatgcacttgcaaatgtcagcattgaaaagccaattcatcttggaccagat
gctcccgtcactggccacatacgaattcgtgcaaagagtcaggtgtttagtctggtgcag
caaggcagaactggagatccaatcagacaccaaggcatttgggtggcccattccgtgatg
cgatctacttctctgatggagtgtccttgtttgttgaaggcggttttaagtgtgttatgc
tgcatcacactggtgactgatagtcatcctatgatcaactaa
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