Caretta caretta (Loggerhead turtle): 125639161 Help Entry 125639161         CDS       T09292                                  Symbol DDB1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay03420   Nucleotide excision repair ccay04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ccay00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     125639161 (DDB1)   09124 Replication and repair    03420 Nucleotide excision repair     125639161 (DDB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ccay04121]     125639161 (DDB1)    03400 DNA repair and recombination proteins [BR:ccay03400]     125639161 (DDB1) Ubiquitin system [BR:ccay04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      125639161 (DDB1) DNA repair and recombination proteins [BR:ccay03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       125639161 (DDB1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       125639161 (DDB1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  125639161 NCBI-ProteinID:  XP_048711707 LinkDB All DBs Position 6:5668095..5692132 Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNGCVTGHFTSSEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK IAVMELFHPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICF VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVSLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLSVDSNEQGSYVVAMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSHRE TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVT QEPKALVSEWKEPKGKNISVASCNSSQVVVAVGRALYYLEIQPQELRQISCTEMEHEVAC LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH YLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcctacaactacgtggtgacggcgcagaagccaacggccgtgaacggctgcgtcacc gggcacttcacgtcctcggaggacctgaacctgctgatagcgaagaacacccgcctcgag atctatgtggtcacggcagaggggctgcggcccgtcaaggaggtgggcatgtatggcaag attgcagtcatggagctcttccacccaaagggggagagcaaggacctgctgttcatcctg acagccaaatataatgcctgtatccttgagtacaagcaaagtggtgagagcattgatatc atcacccgagcgcatggcaacgtgcaggatcgcattggtcggccctcagagacgggtata attggcatcattgaccctgagtgtcggatgattggattgcggctctatgatggcctcttc aaggtcattcctctggaccgggacaacaaggagttaaaggcctttaacatccgcctggag gagctgcaggtcatcgatgtcaagttcctctatggctgccaggctcctaccatctgcttt gtttaccaggatccccagggccgccatgtcaaaacgtacgaggtatccctgcgagagaag gaattcaacaagggtccctggaaacaggagaatgtagaggccgaagcgtccatggtaatt gcagtgcccgagccctttggaggagctatcatcattgggcaagagtcaatcacctaccac aatggtgataaatatctggctatagctccacccatcatcaagcaaagtacaatcgtgtgc cacaaccgtgtggatcccaacggatcccgttacctcctgggggatatggagggccgtctc ttcatgctgcttctggagaaggaagagcagatggatggcacagtcagcctgaaggacctg cgtgtggagctgcttggagagacatccattgcagagtgcctgacctacctagataatggt gttgtctttgttggctctcggcttggggactcccagcttgtgaagctcagcgtggacagc aatgaacaaggctcctacgtagtggccatggaaaccttcaccaacctgggccccatcgtg gacatgtgtgtggtggatctggagagacagggtcaagggcagctggtcacgtgctctggc gcctttaaggagggctccctgaggatcatccggaatgggattgggattcacgaacacgcc agcatcgacctgccagggattaaaggcctatggcccctgaggtccgattcacaccgtgaa actgacaacaccttggtgctatcctttgtgggtcagaccagggttctgatgttaaacggg gaggaagtggaggaaactgagttgacaggattcgtagatgatcagcaaaccttcttctgt ggcaatgtggcccatcagcaactgatccagatcacctctgcctccgtgcggctggtcact caggagcccaaagccctggtgagtgaatggaaagagcccaaggggaagaacatcagcgtg gcttcctgtaacagcagccaggtggtagtggctgtggggcgagcactctactacctggag atccagccccaggagctcaggcaaataagctgcacagagatggagcatgaggtggcctgc ctggacatcaccccactgggggactctaatggcatgtcccctctgtgtgccatcggcctc tggactgacatttcggcccgcatcctaaagctgccctcgtttgagctgctgcacaaggag atgctgggaggagagatcattccccgctccattctgatgaccacctttgagagcagccac tatcttctctgtgcccttggagacggggctctcttctactttgggctcagcattgagaca ggtttgctgagcgaccgtaagaaagtgacgctgggcacccagcccaccgtcctgagaacg ttccgttcgctctccaccaccaatgtctttgcctgctctgaccgccccactgtgatctac agcagtaaccacaagctggtcttctccaatgtcaacctcaaggaggtgaactacatgtgc cccctcaactcagatggctaccccgacagtctggcattggccaacaacagcactctgaca atcggcaccatcgacgagatccagaagctgcacatccgcacggttcccctctacgagtcg cccaggaaaatctgctaccaggaggtgtctcagtgctttggcgtactttcgagtcgcatt gaggtgcaggatgccagtgggggcaccactgcactgagacccagtgccagcacccaggcc ctgtccagcagcgtcagctccagcaagctgttttccagcagtactgccccacacgagaca tccttcggagaggaggtggaggtgcacaatctactcatcatagaccagcacacctttgaa gtgctccacgctcaccagttcctgcagaatgaatacgccctaagcctggtctcctgcaag ctgggcaaggaccccaacacttacttcattgtgggcacggccatggtgtatcccgaggag gctgagcccaaacagggtcgcattgtagtcttccactactcagatgggaaactgcagagt ctggccgagaaggaagtgaaaggggctgtgtattccatggtggagttcaacggcaagctc ctagccagcatcaacagcacggtgcgtctgtatgagtggacggcagagaaggaattgcgc acagagtgtaaccattacaataacatcatggctctctacgtgaagaccaagggggacttc atcctggttggggatctgatgcgctccgttctgcttcttgcctacaagcccatggagggt aactttgaggagattgctcgagacttcaacccaaactggatgagtgccgtggagatcttg gatgatgacaacttcctgggagcagagaatgcttttaacctgtttgtgtgccagaaggac agtgctgccacgaccgatgaggagcgccagcacttgcaggaagtggggctgttccacctg ggggagtttgtcaacgtgttctgccacggctccctggtcatgcagaacctgggcgagacg tccacaccgacgcagggatcggtgctctttggcacggtcaacggaatgatcgggctggtg acatcgctgtcggaaagctggtacaacctcctgctggatatgcagaacagactcaataaa gtcatcaagagtgtgggcaagatcgagcactccttctggagatcatttcacactgagcgc aagacggagccagccacagggttcattgacggtgacttgattgaaagcttcctggacatc agccggcccaaaatgcaggaggtggtagcaaacctacagattgacgatggcagtggcatg aagagagaggccaccgtggacgacctgataaagatcgtggaggagctgacccggatccat taa

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