Caretta caretta (Loggerhead turtle): 125639195
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Entry
125639195 CDS
T09292
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03272
Virion - Hepatitis viruses
ccay03273
Virion - Lassa virus and SFTS virus
ccay04140
Autophagy - animal
ccay04142
Lysosome
ccay04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125639195 (LAMP1)
03272 Virion - Hepatitis viruses
125639195 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125639195 (LAMP1)
04142 Lysosome
125639195 (LAMP1)
04140 Autophagy - animal
125639195 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125639195 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125639195 (LAMP1)
04090 CD molecules [BR:
ccay04090
]
125639195 (LAMP1)
Membrane trafficking [BR:
ccay04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125639195 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
125639195 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
125639195 (LAMP1)
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
125639195 (LAMP1)
CD molecules [BR:
ccay04090
]
Proteins
125639195 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
125639195
NCBI-ProteinID:
XP_048711814
LinkDB
All DBs
Position
1:110041944..110074848
Genome browser
AA seq
425 aa
AA seq
DB search
MARIGCGLPLAAVLLVFLQMSSSAFEVKDQSGKVCIIANLSVSFSVEYTTKSSQQLAANF
TLTQNAEVLANKSSCGKENVSAPVLAIGFGAGHLLQMNFTKASKLYSVDKLMFLYNLSDT
TVFPNSTGETKEVSQKPNIRADLDTRYRCFSTNQINMLNVTITLSNVTLQAYLVNHTLSR
NETLCDADKTPTTPAVTTATSQAPTTTSQAPTTTSQAPTSPPQNPGTGKYNVTGTNGTCV
LARMGLQLNVTYLRKDGKTGLDVLNIVPVNTSFSGSCDHSSAFLNLTFGKTRLLFHFLLN
TSTDKFFLQGVSVTTTLPSEAKEPKFEAVNNSMSELRATVGNSYKCNAEEKLWVSAGAFV
NLFDVWVQVFKIEGNQFGAVEECQLDENNMVIPIIVGAALAGLVLIVLIAYLIGRKRSHA
GYQTI
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggatcggctgcgggctgcccctggccgctgtgctgctcgtgtttttacagatg
tcctcttcagcatttgaagtgaaagatcagagtggtaaagtctgcataatagctaatctg
tcagtgtccttctcagtggaatacaccaccaagagcagtcaacagttggcagcaaatttc
acacttacacaaaatgctgaagtactggcaaacaaaagcagttgtggtaaagagaatgta
tcggctcctgtactggcgattggatttggagcgggacatttgttacaaatgaatttcaca
aaggcttcaaagctgtacagcgttgacaagctaatgttcctttacaatttgtccgataca
acggtgttccccaactcaactggagaaacaaaggaggtttcacaaaaacctaatattcgg
gcagacttggacacaagatatagatgtttcagtaccaaccagattaatatgttgaatgtg
accataactcttagcaatgttacgcttcaagcatatcttgtgaatcataccttaagcaga
aatgaaactctgtgtgatgcagataagacgcccactactcctgcagtcactacagcaaca
agccaggcacctacaacaacaagccaggcacctacaacaacaagccaggcaccaacctca
cctccacaaaatccagggactgggaaatataatgtgactggtacaaatgggacctgtgta
cttgctcgtatggggctacagcttaatgtcacgtatctaagaaaagatggaaagactgga
ttggatgtgctgaatattgttccagtgaatacatctttctctgggagctgtgaccattcc
tctgcctttctgaacctgacttttgggaaaaccagacttttattccattttctactgaat
acgagtactgataagtttttcctgcaaggtgtcagtgtcaccacaactttgccttctgaa
gctaaagaaccaaagtttgaagctgttaacaacagcatgagtgagctgagagctacagtg
gggaactcctataagtgtaatgcagaggagaaactttgggtctcagccggtgcctttgtc
aacttattcgatgtttgggtccaggttttcaagatcgagggaaaccaatttggagcagtg
gaagaatgtcaactggatgaaaacaacatggtgatccctataattgttggcgcagccctt
gctggacttgtcctgattgtcttgattgcttatttgattggcagaaagagaagccatgct
ggatatcaaacaatctaa
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