Caretta caretta (Loggerhead turtle): 125639213
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Entry
125639213 CDS
T09292
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein isoform X1
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125639213 (HPS5)
Membrane trafficking [BR:
ccay04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
125639213 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
125639213
NCBI-ProteinID:
XP_048711846
EnsemblRapid:
ENSCECG00000018043
LinkDB
All DBs
Position
6:22530990..22591536
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AA seq
1139 aa
AA seq
DB search
MTSVPMIPESYSHVLAELECLDPLLSALRLDSSRLKCTCIAVSRKWLALGSSGGGLNLIQ
KDGWKQRLFLTHKEGAISRVACCLHDEDYVAVATSQGLVVVWELNQERRGKPERIYVSTE
HKGKKVTSLCWDTAALRVFVGDHVGKVSAIKINTSKQGKAAAAFVMFPVQIITTVDSRVV
QLDYLDGRLLISSLTRSYLCDTEREKFWKIGNKERDGEYGACFFPVGKSCGSQQPLIYCA
RPGSRMWEANFEGEVLSTHQFKQLLSSPPLPVITLRLDPQYNTSACSLQSLSFPKLLYLT
EHCVMTWTERGIYVFIPQNVQVLLWSEVKDIQDIAVYRNELFCLHTNGKVSHFSLLLVER
CVERLLRRGFWSLAARVCCLFQNSIISCRARKFLPLDKLEHLKSQLDLSTQSDVSSQLEE
LISKLEPLDSACSSRRSSISSHESFSVLDSGIYRVISRRGSQSDEDACSLNSQTLSEDER
LKEFTAHQEEEQLELENVSHTSVVVETDRNETFLPFSIPLSFRSPSPLVSLQAVKESVSS
FVRKTTEKIGTLHMSPDVRVRQEIKDDEESHEVTASIATHSQEEDENEVELQSQPQEEDR
LRDLKVATTEAINKLQDPLVLLEPQCLRGVLQEWFLYLEETFGFKEPSFSGDCLSIKKVK
NVLAEEQSEVLEENIAPEQHSEDHVGKGQTDALQGITEQDQSSEAHFGREVCENDANSKG
ASGHVFQMYPPCLIAHDIHKDLMELTTLCFELNVFPCENGNAEESAEQDLQRTMSWVLAC
QFIKDYFFLLDLKRLKRCITSNYTSSPSVWETYIEGLKELTHASPVTLAMENGDMLKILK
LLNDLGPWDSPLLLAHAQRLYEKFGETAIRPLVKFYPSILPSDIMQLCRHHPAHFLAYLD
SLVKSKPEDERSSLLQSLLNPEALRLDWLCLAVSHDAPQRTNTVDSEGNPRPRSHLFTWG
YSQLILLLIKLPADFVTKERMADCCKSYGFWPGYLSLCLELDRRIEVFTNIVHLDDMNLL
DGEHGSIPETVEEWKFLLHLAQSHSTDLHYHGTQNGNNIGHGSTNWSNCITVENVALLLA
KVIGPDRALPVLQECDLTAEFSERFTRICEILRIAEKRQRALIQSMLERCDRFLWSQQA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgtgccaatgataccagaatcttacagccatgtattggcagaacttgagtgt
ttggatccattgctttctgcactcaggttggattctagccgtctgaagtgcacatgtata
gctgtgtctcggaaatggctggctctgggcagttcaggagggggattaaacctgattcaa
aaagatggttggaaacagaggctgttcctcactcataaggaaggtgccatttcccgggtt
gcctgttgtttacatgatgaagattatgttgctgttgccaccagtcaaggccttgtagtt
gtctgggaactcaatcaggagcgtcgtggaaagccagagcggatttatgtttccactgag
cacaaaggcaaaaaagtcacatctctttgttgggatacagccgcacttcgagtttttgta
ggagatcatgtgggaaaagtgtctgctatcaagattaatacatccaaacaagggaaggca
gctgctgcttttgtgatgtttccagttcagattataaccactgttgactcccgtgtagtt
cagcttgattatttggatggaagactgcttatttcttcacttactcgctcctacttgtgt
gatactgagagagaaaaattctggaaaattggtaacaaagaaagagatggagaatacggc
gcctgttttttcccagttggaaagagttgtgggagccagcagccattaatatattgtgca
cgtcctgggtcaaggatgtgggaggcgaactttgaaggggaggtgctaagtacccatcaa
ttcaaacagctgctctcatctcctcctctccccgttattactctaaggttggatcctcag
tataatacttctgcctgctctctccagtctttgtctttcccaaaactgttatatttgacc
gagcattgtgttatgacgtggacagaaagaggcatttatgtcttcattcctcagaacgtt
caagttttactttggagtgaagtaaaagatatccaggatatagcagtgtacagaaatgag
ttgttctgtctgcatacgaatggaaaagtctcgcacttctctcttctgctagtggagcgg
tgtgtagaacgtctgctaagaagaggtttctggagtcttgctgccagagtctgctgtctt
ttccagaactctattatttcctgcagagcaagaaaatttttgcctctagacaaactagag
cacttgaaatcacagctggacctctcaacccaaagtgatgtcagtagccaactggaagaa
ttgatatcaaaactggaacctttagattctgcatgcagcagcagaaggagcagtatttca
tcacatgaaagtttcagtgtcttagactctggaatttatcgtgttattagtcgaagaggc
agtcagtcagatgaagacgcttgttccctaaacagccaaacgttgtcagaagatgagagg
cttaaagagtttactgcacaccaggaagaagagcagctggagcttgaaaacgtatctcat
acttctgtggtggttgagactgatcggaatgagacttttctcccattcagtattccattg
tcatttcgttcaccatctcctctggtctccctccaagctgtcaaggaaagtgtttccagc
tttgtacgcaaaaccactgaaaagattggcacccttcatatgagtcctgatgtcagagtg
aggcaggaaataaaagatgatgaggagtctcacgaagtgactgctagtatagccacgcac
tcccaggaagaagatgaaaacgaagtggaactacagagccagcctcaagaagaggatcgg
ctaagagatctcaaggtagcaacgacagaagctataaacaaactgcaagatccactggtt
ttgttagaaccacaatgcttgagaggagttttgcaggagtggtttttgtatctggaagaa
acatttggtttcaaagagccttccttttcaggtgactgcttatccattaagaaagttaag
aacgtgcttgctgaagaacagagtgaggttttagaagaaaatattgcaccagagcaacac
agtgaagatcatgtaggcaaaggacagacagatgccttgcaaggaattactgaacaggat
caaagtagcgaagctcattttggcagagaagtgtgtgaaaatgatgccaattcaaaggga
gcctcaggccatgtttttcaaatgtatcctccatgtctcatagcgcacgatattcacaag
gacctaatggagttgacaacattatgttttgaattaaatgtgtttccttgcgagaatggg
aatgcggaagaaagtgctgaacaggatttacagcgaacaatgtcatgggtcttggcttgc
cagttcataaaggactatttctttctcttggatttaaaaagactgaagcgatgtattaca
agcaattacactagcagtcccagtgtttgggaaacttacattgagggattgaaagaactg
actcacgctagtccagtgactctggcaatggaaaatggagatatgttgaaaatattaaaa
ctgttaaatgacttggggccctgggatagtcctctgttattggcacatgctcaaaggctc
tatgaaaagtttggggaaacagctataaggcccttggtcaagttctacccatcaatcttg
ccctctgacatcatgcagctttgtagacatcaccctgcccactttttagcatatttagac
agtcttgttaaatcaaagccagaagatgaaaggtcgtccctgcttcaatctcttcttaat
cctgaagcgttacgactggattggctgtgtctggcagtttcccatgatgcgccacaaaga
acaaatacagtggattctgaaggaaaccctagaccacgttcacatttgtttacctggggc
tatagccaactgattttgcttctgattaaactcccagctgattttgtaacaaaagagagg
atggctgactgctgcaagtcatatggcttctggcctggatatctctctctgtgtttggaa
ctggatagaagaatagaagtctttactaatattgttcatttggatgatatgaacctgttg
gatggagaacatggctcaattccagagaccgtggaagaatggaagttccttctccatctt
gcacaaagtcacagcactgacctccactatcatggtacacagaatgggaataatatcggc
catggtagcactaattggtcaaactgcattactgttgaaaatgtagctcttttgttggct
aaggtaattggcccagatcgtgccttgccagtactgcaggagtgtgatttgacggctgaa
ttctctgagagatttaccaggatctgtgaaatactgagaattgctgaaaaaaggcaaaga
gccctgatacagtccatgttggaaaggtgtgaccgttttctgtggtctcagcaggcatag
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