Caretta caretta (Loggerhead turtle): 125639215
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Entry
125639215 CDS
T09292
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03022
Basal transcription factors
ccay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125639215 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
125639215 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125639215 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125639215 (GTF2H1)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125639215 (GTF2H1)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125639215 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
125639215
NCBI-ProteinID:
XP_048711863
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All DBs
Position
6:complement(22494702..22531057)
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AA seq
596 aa
AA seq
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MVAGRTCHVTGRCHGDTSLPRHVTRSPSVRRGTLASSGHVPLLTSLAAPWKRRRRDPPSS
GTGSGWSQCPAPPALSSRRARTRRQQQPAAAWGLSSRPHGQKISPEGKAKIQLQLVLHAG
DTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQEDPVLFQLYKDLV
VSQVISAEEFWANRLSLNAVDNSVAPSKQDVGISAAFLADVRPQTDGCNGLRYNLTSDII
ESIFRTYPAVKVKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSKDLFAECAKMDEKG
LKTMVSQGVKNPLLDLTALEDKSLDEGYGVSSVPSTSNSSKSLKESSNAAIIKRFNHHSA
MVLAAGLRKQEAQNDHYSETSSMDGNSRDSDFFQTPIKKVKLQEAIEYEDLGKNNSIKTI
ALNLKKSDRYYHGPTPIQSQQYATSQDIINSFHSIRQEMEAYIPRLTQVLSSGAATSTIT
ALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFPVNTPFLEEKVMK
MKSNLERFQVTKLCPFQEKIRRQYLSTNLINHIEEMLQTAYNKFHMWQSRRMLKKT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggggagaacctgtcatgtgaccgggaggtgtcatggcgacaccagtctcccc
cgtcacgtgacccggtctccctctgtgcgtcgcgggactttagctagttccggtcacgtg
cccttgctgaccagtttggccgccccatggaagaggaggcggcgagaccccccgagtagc
ggcaccggcagcggctggagtcagtgcccagcgccacccgccctctcatcccgccgcgcc
cgcacccggcggcagcaacagccagcggcggcctggggcctgagcagccgcccgcacggc
cagaaaatcagtccggaaggaaaggctaaaattcagctacagctggtactgcatgcaggg
gacacaaccaacttccacttctctaatgaaagcacagcagtgaaggagcgagatgcagtg
aaggaccttcttcagcagctgttacccaaattcaagaggaaagcaaataaagaacttgag
gaaaagaacagaatgctgcaagaagatcctgttttgtttcagctttataaagatctcgtt
gtgagccaagtaattagtgctgaagaattctgggccaaccgtttaagcttgaatgctgtg
gataattctgtggcacctagtaagcaggatgtgggcatctctgcagcttttctggctgat
gttcggcctcaaacagatggctgcaatggtctgaggtataacttaacttcagatattatt
gaatccatattcaggacttatcctgcagtaaaagtgaaatatgcagaaaatgttccacat
aatatgacggaaaaagaattctggacacgatttttccagtctcactacttccatcgggat
aggctgaatacaggctcaaaagacctctttgctgaatgtgccaaaatggatgaaaaaggg
ttaaaaacaatggtgtctcaaggggtgaaaaatccactgctagatttaacggccttggag
gataaatcgttagatgagggttatggtgtttcctctgtgccatccacatcaaactcctca
aagtccttaaaggagagtagcaatgctgccattataaaacgctttaatcatcacagtgcc
atggtccttgcagctgggctcagaaaacaagaagcacaaaatgatcactacagtgagacc
agcagtatggatggaaactcccgggattcagatttctttcagacaccaataaaaaaggtg
aagctacaggaggctattgaatatgaagatttaggaaagaataatagcattaaaactatt
gcactaaacctaaagaaatctgatcggtattatcatggtccaactccaattcaatcacag
caatatgcaaccagtcaggatattattaattcttttcatagtattagacaagaaatggaa
gcctacatacccagactaactcaggttctttcaagtggtgctgctactagcaccatcaca
gccctgtcgcctggaggagcccttatgcagggtgggacacagcaagccataaaccagatg
gtgccaaatgatgttcagtctgaactgaaacacttgtatgtggcagttggggagctactg
cgacacttctggtcctgctttcctgttaatacaccattcctagaagaaaaggttatgaaa
atgaagagtaacttggaaagatttcaagttacaaagctctgtccattccaagaaaaaatt
cggagacagtatttaagcacaaatttgataaatcacatagaagagatgctgcagacagcc
tacaataagttccacatgtggcagtcccgacgtatgctgaagaaaacgtga
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