Caretta caretta (Loggerhead turtle): 125639391
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Entry
125639391 CDS
T09292
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03013
Nucleocytoplasmic transport
ccay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125639391 (UPF3A)
03015 mRNA surveillance pathway
125639391 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125639391 (UPF3A)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125639391 (UPF3A)
mRNA cycle factors
P-body specific factors
125639391 (UPF3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
125639391
NCBI-ProteinID:
XP_048712274
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All DBs
Position
1
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AA seq
487 aa
AA seq
DB search
MRSEREARPGLARGGGREKRPMETPLRRESPRREPETPPPPPGPPPPPHPALGRQREEKR
AALSKIVIRRLPPSLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPDDI
LLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESY
CADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRREL
EKKRLREEEKRKRREEERRKRKEAEKQKKIAEKEIRIKLLKKPEKGDDLASEMNKEKGEE
ADIEESKWEKSPGSGSIKSKPLEGSPKELKEKSQNDSDKEQMDLERRFREKDLERPRYRL
DDGRKHRAHYEFDKFVRRNEEELKWGKAYSQDRGKKGNHNYSFTVEAVDKLGKEDKCDDM
ASKKERIRNKDRPAMQLYQPGARIRTHTGSTSKIYDCSGKSCEDACDRKYEVDNSTGGGS
EKSEEAE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggagcgcgaggccaggccggggctggcgcgcgggggcggccgggagaagcgg
cccatggagaccccgctccggcgggagtccccgcgccgggagcccgagacccccccgccg
cctccggggccgcccccgccgcctcacccggcgctgggcaggcagcgggaggagaagaga
gcggcgctgagcaagatagttattcgccggcttcctcctagtttaaccaaggagcaactg
gaagagcagctacatccgctacctgcccatgattattttgaattttgcactgctgatccc
agtctttatcctcatctctactcaagagcatacattaattttagaaatcctgatgacatc
cttctttttagggatcgctttgatggctatgtcttcattgataataaaggtttggaatat
cctgctgtggtggaatttgctccattccaaaagatttcaaaaaagaagctaaagaaaaaa
gatgcaaaagctgggagcattgaggatgatccagaatataggaaatttttagaaagttac
tgtgccgatgaagagaaaatctgtgctaatcctgagactctgttgggagagattgaggca
aaaacaagggaacttattgctagaagaacaacacctcttttggaatatattaaaaataga
aaattagaaaagcagaggatacgtgaagaaaaaagggaagaacgaagaaggagagagtta
gaaaagaaacgtctgcgagaagaagagaaaagaaagcgcagagaagaagaaagacgtaaa
agaaaagaagcagagaagcaaaagaaaattgctgaaaaagaaataagaatcaagcttctt
aaaaagcctgaaaagggagatgacctggccagtgaaatgaataaggaaaaaggagaagaa
gctgatattgaagaaagcaaatgggaaaaatcacctggatccgggagtataaaatccaag
ccattggagggctcaccaaaggaacttaaggaaaagtcacagaatgatagtgataaagag
caaatggatttggagagaagatttcgagaaaaagaccttgaaagaccaagatatcggttg
gatgatggcagaaagcatagagctcactatgaatttgacaagtttgtgagaaggaatgaa
gaagagctgaaatgggggaaagcatacagccaagacagagggaagaaagggaaccacaac
tacagcttcactgtggaggccgtagacaaactgggtaaagaggacaagtgtgatgacatg
gcatccaaaaaggagcgcataagaaataaggatcgtccagccatgcagttataccagcca
ggagctcgcattcgaacacatacgggatctacaagtaagatctatgactgcagtgggaag
tcctgtgaagatgcctgcgatagaaagtatgaggtagataattcaactggaggtggttct
gagaagagtgaagaggcagaatga
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integrated database retrieval system
