Caretta caretta (Loggerhead turtle): 125639415
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Entry
125639415 CDS
T09292
Symbol
SH3RF3
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF3
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccay01009
]
125639415 (SH3RF3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125639415 (SH3RF3)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125639415 (SH3RF3)
Protein phosphatases and associated proteins [BR:
ccay01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125639415 (SH3RF3)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125639415 (SH3RF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125639415
NCBI-ProteinID:
XP_048712373
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All DBs
Position
1:complement(111503522..111890989)
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AA seq
876 aa
AA seq
DB search
MLLGAPWLCAPEAAAAKRGAEARRGGGEAAAAGEAMDESSLLDLLECSVCLERLDTTAKA
LPCQHTFCRRCLESIVSSRHELRCPECRILVGCGVDELPANILLVRLLDGIRQRPRGGGG
SGGGSPTAQGSAAAAAAAAPGSGGSDPAASPACHPAAATGSPSAAAASRSALLGKSISQL
PYGKALYTYEGKEPGDLKFTKGDIIILRRKVDENWYHGELNGNHGFFPASYIQCIKPLPQ
APPQGKALYDFEIKDKDQDKDCLTFTKDEILTVIRRVDDNWAEGMLGDKIGIFPILYVEL
NESAKQLIEMDKTCLAAASGCDVPLPSDTNMAVNLAQCSTLNNTGAVSAIQRHIDGKKNA
KKRHSFTALSMTHKSSQAMHNRHSMDISAPVLISSSDPRAAARIGDLTHLSSSAPAQDSS
SIGTATVAGPRTSAIIGDQGTQTKVQLPLNIYLALYAYKPQKNDELELRKGEMYRVIEKC
QDGWFKGTSLRTGMSGVFPGNYVTPVSRVPVGGGQPRNSLAGGAQTIKGSPGAVHPGAVH
PGGASLTNTATAVRPVVPITAPQTHLQQQTVSPQMNNCMRYSAQQMVSQTRSAMQMVAHP
SAQVPERPTATVSPLRTQNSPSRLPATVVRSHSMASPQHVHQSPVQVIPGAQCARPIIPL
TSAAAAITPPNVSAANLNGEAGNGPVSSLVTSSPTNTSCKAEERKNEKKEKKSGLLKLLA
GASTKKKSRSPPSVSPTPDPQGAVEGALQGAVGPELSSLSSHGRAGSCPIESEMQGAMGM
EPLHRKTGSLDLNFSIPSPARQLPSSLAAIRPEPKPLHRERYRVVVPYPPQSEAEIELKE
GDVVFVHKKREDGWYKGTLQRNGRTGLFPGSFVESF
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgctcctaggggcgccctggctgtgcgcgcccgaggcagccgcagcaaagcggggagcg
gaggcgcggcggggaggcggcgaagcggcggcggcgggggaggcgatggacgagtcgtcc
ctgctggacttgctggagtgctccgtgtgcctggagcggctggacaccacggccaaggcg
ctgccctgccagcacaccttctgccgccgctgcctggagagcatcgtcagctcccgccac
gagctgcgctgccccgagtgccgcatcctggtgggctgcggggtggacgagctgcccgcc
aacatcctgctggtccggctgctggacggcatccgccagcggccccggggcggcggcggg
agcggcggcggcagccccacggcgcagggcagcgcggcagcagcggccgccgccgcccct
ggcagcggaggaagcgacccggcggcgtcgcccgcctgtcatcccgcggcggccaccggc
tcccccagcgcggccgccgccagccggagcgccctgctgggaaagagtatttctcaactg
ccctatggtaaagctctctacacctatgagggaaaagaacctggtgacctcaagtttacc
aaaggggacattatcatactacgacgaaaggtggatgagaattggtatcacggagagctc
aatggaaaccatggcttctttccagccagctatatccagtgtatcaagccccttccacaa
gctccgcctcagggcaaagcactttacgattttgaaataaaggataaagaccaagacaag
gactgtttaaccttcaccaaggatgaaattttgacagttatcagacgagtagatgataac
tgggcagaaggaatgctgggagataaaattggaattttccctattctctatgttgagctc
aacgaatcagctaaacagcttatagagatggacaagacatgcttagctgctgcatctggc
tgtgatgtccctttgccatctgacaccaacatggcagtaaatttggcccagtgctctact
ttaaacaatacaggagcagtcagtgccattcagcggcatattgatggcaagaagaatgcc
aagaaacgccactccttcactgctctcagtatgacacacaaatcctctcaggccatgcat
aacaggcattccatggacattagtgctccagttttgatcagctctagtgatccccgagct
gctgccagaatcggagacttgactcatctttcatccagtgctccagcccaggactcctcc
tcaattggaacagctacagtggctggacccagaacaagtgcaataattggagatcagggg
acacagacaaaggtccagctccccctcaatatctacttagctctgtatgcatataagcct
cagaagaatgatgagctggagctgcgtaaaggtgaaatgtatcgggtcattgagaagtgt
caggatggctggttcaagggaacatctctgagaacgggaatgtctggagtctttccaggc
aactacgtgactcctgtttccagagtgcctgtaggaggtggccagcccaggaatagctta
gcgggtggggctcagacaataaaaggatccccaggagctgttcacccaggagctgttcac
ccaggaggtgcaagtcttacaaatacggccactgctgtcagacctgttgttccaatcact
gcacctcagacacatctccaacaacagacagtgtctcctcagatgaataactgcatgagg
tattcagcccagcaaatggtcagccagactcgcagtgccatgcagatggtagcacaccct
tctgcccaggtaccagagcggcccacggcaactgtctcaccactgagaacccagaactct
ccatcccgtctcccagccactgtggttagatcacactccatggcttctccacaacacgtc
caccagtcccctgtccaagttattcctggagcacagtgtgccaggcccatcattcctctc
acttcagcagcagccgccattactcctccaaatgtcagtgcggccaacttgaacggggag
gcaggaaatgggccagtcagcagcttggtgacttccagcccaaccaacacctcctgcaaa
gcagaggagaggaaaaatgaaaagaaagagaagaagagcggattgttgaaacttttagcc
ggcgcgtcaacaaaaaagaaatcacgctcccctccatctgtgtctccaacaccggaccca
cagggagccgtggagggagctctgcagggagcggtgggacctgaactctcctcactctcc
agccatggcagggcaggttcatgcccaattgaaagtgaaatgcaaggagctatggggatg
gagccactgcacagaaaaacaggctccttggatttgaatttttccattccttctcctgcc
aggcagctaccttcttcgttggcagccatccgtccagagcccaagccattgcaccgggaa
aggtaccgtgtcgtggttccatatcctcctcaaagcgaagcagagattgaactgaaagaa
ggtgacgttgtgtttgtgcacaagaagagagaggatggctggtataaggggacgttacag
cgaaatggcaggacgggcctcttccctggaagctttgtagagagcttctga
DBGET
integrated database retrieval system
