Caretta caretta (Loggerhead turtle): 125639510
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Entry
125639510 CDS
T09292
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125639510 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
125639510 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
ccay04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125639510 (LDB3)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
125639510
NCBI-ProteinID:
XP_048712714
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All DBs
Position
7:complement(72495268..72687478)
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AA seq
823 aa
AA seq
DB search
MSYNVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSHMNQGDLVVTIDGVNTDGM
THLEAQNKIKSASYNLSLTLQKSKRPAPVPTATPKVDSPRPVIPHQKDPALEVSGNRTIF
SPLTSTATGPLGSILATNGTFSGYLSKQEISCSNSSSFLKTTAVRTSMASLSVTPDISPA
KSDLGSKLSPVFTDGSSPKHELSPARQYNNPIGLYSAETLKEMVEMHKLSLKRRASEGGL
PRGESPLASLPVKDPHIDSASPVYQAVLKTQNKSEDELDDWTRRSANLQSKSFRILAQMT
GTEYMQDPDEEALRRSSGKENVAAAAENSPTGSHHVAQYVTSSVWHPPKSRTMDANIDKA
KPVASKGSVRFGTGSSQREASYIRTGQKAPLTSSNNQSTPVEHAPVSTSSASVPVPVASA
NPPATAIQNTSNQMTPPSATPISVVQDSFSSSFQRVLAGPSSLSQPKPFPGSKNMSLAAS
TVSSAISAQSSFNRHSSTSISYQSKKRGTGQSYTSTPVFQGTAPSSGYSESPVPAPKPRV
VTTASIRPSVYQPAPAPVHSYTPGKADPSCRPPWVTDDSFSQKFAPGKTTTSVTKHTLPR
GAPAPSPASTSAYSSPSISASSQTPAVARGTIQRAERFPASNRTPLCGHCNSIIRGPFLV
AMGRSWHPEEFNCAYCKTSLADVCFVEEQNSVYCERCYEQFFAPTCARCNTKIMGEVMHA
LRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIE
ALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaacgtgactctcaatggacctggaccatggggtttccgactgcaaggggga
aaggacttcaacatgcccttgaccatatccagaatcacccctggcagcaaagcagcccag
tcacacatgaaccagggggaccttgtggtaaccattgatggagtcaacacagatggcatg
acccacttagaggcccagaacaagatcaaatcagccagctacaacctgagccttaccctt
caaaaatctaaacgcccagctccagttccaacagctacacctaaagttgactctcccagg
cctgtaattccccatcagaaggaccctgctttggaagtcagtggcaacagaacaatcttc
agtcctctaactagcacagcgactgggcctttgggtagtatattagccaccaatggaacg
ttttcaggctacctcagcaagcaggagatcagctgttcaaatagctcttccttcttaaag
actactgcagttagaacttccatggcctctctgtctgtgacacctgacatttcacctgca
aagagtgacctaggttcaaaactaagccctgtgttcactgatggcagtagtcctaaacac
gagttgagccctgcaaggcagtataacaaccccattggcctttactcagcagagactcta
aaggaaatggttgagatgcataaattaagtctcaaacgaagggcttcagaaggtggactt
cctagaggtgaatctccattggctagccttcctgttaaagatcctcacattgacagtgcc
tctccagtgtatcaggctgtgcttaaaactcagaacaagtctgaggatgagcttgatgac
tggactcgccgttctgccaatctgcagtccaagtctttccgcatcctcgcccagatgacg
ggaacggagtacatgcaagacccggatgaagaagccctgaggagatcaagtggcaaggaa
aatgttgctgcagcagctgaaaacagccctacaggttctcatcatgtggcacagtatgtg
acctcaagtgtttggcatcctcctaagtcacgcaccatggatgccaacattgacaaagct
aagccagtggcctccaagggttccgtgaggtttggaacgggttcaagtcaaagggaagcc
agttacatcaggactggccagaaagcccctctgacttcatccaataatcaaagtacccct
gttgagcatgcgccagtgtctaccagctctgcctctgttcctgtaccagttgcttcagcc
aatccgcctgctactgctattcaaaacacgtccaatcagatgacaccaccatcagccact
cctatctctgtagtacaagattccttctcgtcctctttccaaagagtgcttgcaggcccc
agctctctgtcacagcctaaacctttccctgggtccaagaacatgtcactagcagcttcc
actgtttcgtctgctatctctgctcagtctagcttcaaccggcattcttccacctccatc
agctaccagtcaaaaaagagaggtacgggccagtcctatacatcaacaccggttttccag
ggtaccgctccttcctcaggctacagtgaaagtccagttcctgctccaaaaccaagagtt
gtcactactgctagcataaggccctctgtctaccagccagcaccagcaccagtgcattct
tatacaccagggaaggctgatccttcatgccgtcctccttgggtaacagatgactccttt
tcccagaaatttgcacctggaaaaaccaccacctccgtgaccaaacataccctaccacgg
ggtgctccggcaccatctcctgcctcaacttcagcctactcgtctccttcaatatcagcc
tcttctcagactcctgctgtagccaggggaacaattcaaagggctgagcgtttcccagcc
agcaaccgaactcctctttgcggacactgtaacagcataattcggggtcctttcctggta
gccatgggtcgttcctggcacccagaggagttcaattgtgcttactgcaagacatcttta
gcggatgtgtgctttgtggaggagcagaacagtgtgtactgtgagcgctgttatgagcag
ttctttgcaccaacctgtgccagatgcaacaccaagatcatgggggaagtgatgcatgct
ttaaggcagacttggcacacaacttgctttgtctgtgctgcctgtaagaaaccgtttggg
aatagcctcttccacatggaggatggggagccctactgtgagaaagattacattgctttg
ttcagcacaaaatgccatggctgtgattttcctgttgaagcaggagataaattcattgaa
gcccttggacacacttggcatgatacctgctttatttgtgctgtgtgccatgtgaatttg
gaaggtcagccattttactccaagaaggataagccactgtgcaagaaacatgctcatgcc
atcaatgtctaa
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