Caretta caretta (Loggerhead turtle): 125639557
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Entry
125639557 CDS
T09292
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04141
Protein processing in endoplasmic reticulum
ccay04210
Apoptosis
ccay04217
Necroptosis
ccay04218
Cellular senescence
ccay04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125639557 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125639557 (CAPN1)
04217 Necroptosis
125639557 (CAPN1)
04218 Cellular senescence
125639557 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125639557 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125639557 (CAPN1)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125639557 (CAPN1)
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C2: calpain family
125639557 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
125639557
NCBI-ProteinID:
XP_048712897
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All DBs
Position
7:complement(32031050..32089986)
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AA seq
714 aa
AA seq
DB search
MAEEIITPVYCTGVSAQVQKQRAKDLGLGQHENAVKYLGQDFEKLRNACLQSGALFRDNT
FPPAAASLGFKELGPNSSKTYGIKWKRPTEMCSNPQFIVDGATRTDICQGALGDCWLLAA
IACLTLNDTILHRVVPHGQSFQNGYAGIFHFQIWQFGEWVDVVVDDLLPTKDGKLAFVHS
AQGNEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYELRKPPSDLYQIILK
ALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKQINFRGQNVNLIRMRNPWGE
VEWTGAWSDNSSEWNVVDPSVGQQLRIKMEDGEFWMSFQDFLREFTRLEICNLTPDALKA
RKFRKWNSTLYDGTWRRGSTAGGCRNFPATFWINPQFKIRLEEVDDNDDDYSRESGCSFL
LALMQKHRRRERQYGKDMETIGFAVYEVPPEFVGQSAVHLKRDFFLANASRARSEQFINL
REVSTRFKLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDQIQANLPDEKVLSE
SEIDNSFKQLFKQLAGADMEISVSELQTILNKIISKHKDLRTKGFSTESCRSMVNLMDRD
GNGKLGLVEFNILWNKIRSYLAVFRKFDLDKSGCMSAYEMRMALESAGFKLNKKLYELII
TRYSEPDLAVDFDNFVCCLVRLETMFRFFQSLDTDKDGIVTFDLFKWLQLTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaatcatcaccccagtgtattgcacaggcgtctcagctcaggtccagaag
cagagggctaaggatctaggcctggggcagcatgagaatgcagtgaagtacttgggccag
gactttgagaagcttcggaatgcatgcttacagagtggagccctcttccgagataacacc
ttccctcctgcagccgcctccttgggcttcaaagaattgggtccaaactcctccaaaacc
tatggaatcaagtggaagagacccacggaaatgtgttccaacccgcagttcattgttgac
ggagccacccgcacagacatctgccagggagctctcggtgactgctggctcctagctgca
attgcttgtctcaccttgaatgataccatcctccatcgagtggtcccccatgggcagagc
ttccagaatggatatgctggcatcttccacttccagatctggcagtttggggagtgggtg
gacgttgtagtggacgatcttctcccgacgaaggatgggaagctggcttttgtacactcg
gcacaaggcaatgagttctggagtgccctactcgagaaggcttatgccaaggtgaatggc
tgctatgaagctctgtctggaggaagcacctcggagggctttgaagacttcactggaggg
gtcaccgaatggtatgagcttcggaaaccccccagtgacctttaccaaattattctgaaa
gctctggaaaggggatctctgcttggctgctccattgacattaccagtgcttttgacatg
gaggctgtaacatttaaaaagctggtgaagggtcatgcctattcggtaacaggagccaaa
cagattaacttccgaggacagaatgttaatctaattcgaatgcgaaacccatggggagag
gtggaatggactggagcctggagtgataactcttctgagtggaacgtggtggacccatct
gtgggacagcagctaaggattaaaatggaagatggggaattctggatgtccttccaagat
tttttgagagagttcacacggctggagatctgtaaccttactccagatgcactgaaagca
cgcaagttccgcaagtggaactcaacactctatgatggcacctggagacgggggagcaca
gctggaggctgcaggaattttccagctacgttctggataaatcctcagtttaaaatccga
ctggaagaggtggatgataatgatgatgactacagcagagaatcgggctgcagctttctc
ctggcactcatgcagaagcaccgtcgcagggaaaggcaatatgggaaggacatggagacc
attggctttgctgtctatgaggttcctcctgagtttgtaggccagtctgcagttcacctg
aaacgagatttcttcctggcgaatgcctcacgagcccgctcggagcagttcataaacctc
cgtgaagtcagcacacgcttcaagttgcctccaggggagtatattgttgtgccttccacc
ttcgaacctaacaaggaaggagattttgtcctcagggtcttctcagagaaaaaagctgga
actgaggagatggatgatcagatccaggctaatcttccagatgaaaaagtgctttctgaa
agtgagattgataacagtttcaagcaacttttcaagcagcttgctggagcggatatggaa
atcagtgtctcagaactgcagactatcctcaacaaaatcataagtaaacataaagacctc
cggactaaagggttcagtactgagtcatgccgaagtatggtgaacctcatggatagagat
ggaaatgggaaattaggactggtggaattcaacatcctctggaacaaaattaggagttac
ctggctgtctttaggaagtttgatttagacaagtctggatgcatgagcgcctatgaaatg
cgaatggcgctggagtctgcaggctttaaactgaacaagaaactgtatgaattgatcatc
acccgttattcggagcctgacttggctgttgacttcgataactttgtgtgctgtttagta
cgacttgaaaccatgttcaggttttttcaatctctggacacagataaagatggaattgtc
actttcgacttatttaagtggttacagctaaccatgtttgcttga
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