Caretta caretta (Loggerhead turtle): 125639579
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Entry
125639579 CDS
T09292
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125639579 (JMJD1C)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125639579 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
zf-C5HC2
C1_2
FYVE
Motif
Other DBs
NCBI-GeneID:
125639579
NCBI-ProteinID:
XP_048712961
EnsemblRapid:
ENSCECG00000016216
LinkDB
All DBs
Position
7:complement(77950793..78265344)
Genome browser
AA seq
2540 aa
AA seq
DB search
MAVVETRPELVGKRFLCVGGAEEEPPERGESGRWRAGVIRAVSHRDSHSPELAVYVEFDD
LEWEKREWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYR
SITAVEFLVDKQLDFVTEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKVWVKEQKVQEIFM
QGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTFL
DDVVHSLLKGENIGITSRRRSRSNQNSNTAHGHYTRAQANSPRPAMNSQTATPKQNSHQH
HQQRNARPNKRKGSDSSMPDEEKMKEEKYDYICRGENPKSKHKHFISKRRKPEEDEKKLS
MKRVRTDNISDYSESSDSENSNKRLTDSSSEQNSENELKSKNTSNINGEEGKSQSSEGVE
EQTLIDRQSPWDEIQADKNHQDAERPKSAELDLQEKKSLRPAEQLKFHSQSASDARVQEC
SVENRNTMELLTNEQFVPRPPTPKCGGDATTETNSDEESQENAASTFGLQKLQKIVSCGS
NLKHQFTNVNFLEVRKRETDQSWVSDVVSKMDLIQSGIMKTTVNEHLNPEKEKVQHGSFV
SSLNVVSLAEEGKLHKQSPASDAMKSKSSTSVDHPKTKSYSSPDVKPKLTQSPDTVKSKV
SYQNSHVTGVSRSANKTEHDMPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLI
GQETGTNHISPYLHQHNYPLHSSSHRTCLNPNTHHPALSGAPHLLTGSSNQTPLSAINTH
SLSTASHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQMLQHQSP
HLLGQAHPSASYNQIGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEASLRRNTPS
PWLHQPTPVTSADSLGLLSHIPVRPSSADPHRPLKLTTHSSPPLSKNIVDHHKEELERKA
FIEPLRSVTTAPVKTDLEHSRTQTAKESHLHRHFVDPMLSQLQKPPQETGERLSKYKEEH
RRILQESIEVAPFTAKIKALEGERENYSRVTPLSSSSPKSYAVKHDKEPERSVSELYKIK
HSAPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSSLYVDKQNSCLSTAANPQSLTSFISS
LSKPPPLIKHQPEGEGSVSKITEQLSHQVTSHSVNSFRSDCRSPTQLSVSSSNTLRSMPA
LHRAPVFHPPVHQNLERKESSYSSLSPPTLTPVQPVNAGGKIQELQKPPTLVPEPKEAQT
MYKSTSDQNLSDIWKSNNAPNNEKVEWHVERTSGKTQSATASVIVRPPSSTKYDSMPGMQ
SAPKDRVNERSSSTGTNQTECVKPVEARDTGRIILPNMNSETTHTHYEKNFPSVSQGSIP
SSVTPTTTIVCSTKTDVTTSAATTTGVSSWGSSEVTYSLSNTVLACTPLECTSSRTVSQV
VAQTQESKVSTTAPITPASGKTGSAIQPNSGFSGPTDFIHLKKHKAALAAAQFKSSNASE
IESNTVKNQTFPASISLDSAIVCNTINKANCVGNGQASQTSQLNYHTKLKKAWLTRHSEE
DKNTNKKENSGNYVSEIIKPCTVNLIASTSSDLQNNIDSTILADKFVKEDKHTRRKAKRT
YESGSECGDSDESESKSEQRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKER
SKLKLQSSSNSTGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSK
KGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDDAMSLWTHDNYEDDEVDLE
TSKYILDIIGDKFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVC
QKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAM
HSLREKFEIKSYCQCTSKQSIQTGKFPAMNGVSQVLQNVLNHSNKISLCMPESQQPNTPQ
KSETNGNTSPGSDVSADSKLTPPESQSPLHWLADLAEQKAREEKKENKECLPGKHTKEER
DQESSESLNCKTSPPVSQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTTGGK
GGRTMPNILDDIIASVVENKIPPNRPPKINVKSELKDGPKDGQKSILDDCSKFYSGIPHS
WICDKHILWLKDHKNSSNWKLFKECWKQGKPVLVSGVHKKMNINLWKAESISLDFGDHKA
DLLNCKDSIISNTNVKEFWDGFEEVAKRQKIKGGETVILKLKDWPSGEDFKAMMPARYED
LLKSLPLPEYCNPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAAAKDQDIGTTNLHVEVS
DVVNILAYVGIAKGNGVLSKAGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDVD
KIREFLQKIAKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTIIQFLGDAVIL
PAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKMQVKNILYHAV
KEMVRALKIHENEMEDVEEN
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtggagacgcggccggagctggtggggaagcggttcctgtgtgtcgggggc
gccgaagaggagccgccggagcgcggggagagcgggcgctggcgcgctggggtcatccgc
gccgtgtcccaccgggattcgcacagccccgagctggcggtatatgtggaatttgatgac
cttgaatgggaaaaacgagagtgggttaaggtttatgaagattttgcagccttcttggtg
gagtaccagctggtctgggcaaaaagaaaggaccctagccagactcagggatcaaagatc
aaacaaattcaatggcctgcattgacattcaagcccttggttggaaaaagtgtgtacagg
tcaatcactgcagtagaattccttgtggacaaacaactggattttgtaactgaagatagt
gcctttcagccctatcaggacgacgtagacagtctaaacccagttctcagggacaacccg
cagcttcacgaggaagtaaaagtctgggtaaaagaacaaaaggttcaggagatttttatg
caaggtccatattccttaaacggctatagagtcagagtatacagacaggattctgccacc
cagtggttcactggtataattactcatcatgatctttttacccgcactatgattgttatg
aatgaccaggtgttagaaccacagaatgttgatccttctatggttcagatgacctttcta
gatgatgttgttcactctttgttgaaaggtgaaaatattggcatcacatcacgtcgcagg
tctcgttccaaccagaacagcaacacagcccacgggcattatacacgtgctcaagcaaat
agtcccagaccagccatgaattcccaaactgcaacaccaaaacagaactctcaccagcac
catcaacaacggaatgctcgtccaaataaaaggaaaggctcagatagcagcatgcctgac
gaggagaagatgaaggaagaaaaatatgattatatatgtcgaggagaaaatcccaaaagt
aaacataaacacttcattagtaaaagaagaaaacctgaagaggatgaaaagaaactaagt
atgaaaagagtgcggacagacaatatctctgactactctgagagcagtgactcagaaaat
tcaaataaaagattaacagattcttcatcagagcaaaattcagagaatgagttgaaaagc
aagaacacttcaaacataaatggagaagaaggaaaatcccagagtagtgagggggtagag
gaacagacactaatagataggcagtctccatgggatgaaatacaagcagataaaaatcat
caagatgcagaaagaccaaagtcagctgaattagacctacaagaaaaaaaatcactccgt
ccagcagagcagctgaaatttcatagtcagagtgccagtgatgcacgtgttcaagagtgc
agtgtagaaaatcggaatactatggaattgttaacaaatgagcagtttgtacccaggccg
cctacaccaaaatgtggtggtgatgcaactactgaaaccaattctgatgaggagagccag
gaaaatgctgcaagtacctttgggttgcagaaacttcagaaaatagtgtcctgtggcagc
aatttaaaacatcaatttacaaatgtaaattttctagaagtaagaaaacgagaaactgat
caaagttgggttagcgatgttgtcagtaaaatggatttgatacagtctgggattatgaaa
acgacagtaaatgaacatttaaatcctgaaaaagaaaaagttcaacatggctcatttgtg
tcttcattaaatgtagtttcattagctgaagagggtaaactacataaacaaagtccagcc
tctgatgctatgaagtcaaaatctagtacttcagttgatcatcctaaaacaaagtcatat
tcttcacctgatgttaagcctaaactcacccaatctcctgatactgtgaagtcaaaggtt
agttatcagaacagccatgttactggagtatcaaggtcagcaaataaaactgagcatgat
atgcctaggtctagttttcatccggttccagctcgagttagtgcgttagaagctactaaa
agtcctcttattattgacaagaatgaacatttcacagtatacagggatcccactcttatt
ggtcaagaaacaggaactaatcacatttcaccttacttacatcagcataattatcctctt
cattcctcatcccacagaacctgtttaaatccgaacacgcatcatcctgcattaagtggt
gcaccccatctgttaactgggtcttcaaatcagactccattatctgctattaacactcat
tctcttagtactgcatctcaccattctgttcatcaccctcatctacttcctgcagtgtta
cctggagtgcctacagcttccttattaggtggccatccacgactagagactgctcatgcc
agcagcttaagccatttggcattagcacaccagcagcagatgttacagcaccagtctcca
catcttcttggacaagctcatccttctgcttcatataatcagataggactttatccaatt
atttggcagtatccaaatggaacacatgcttactcaggacttggtctaccctcctctaaa
tgggtccatccagaaactcctgttaatgctgaggcttctttaagaaggaatactcccagc
ccttggttacaccaacccacccctgtgacctcagctgacagtcttgggttactgagtcac
attcctgtaagaccatccagtgcagatccgcatcggccactcaaattgacaacacattct
agtccaccattgtccaaaaatatagtagatcatcacaaagaagaattggagaggaaagca
tttattgaacctttacgttctgttacaactgcacctgtaaagactgatctggaacatagc
agaacacagactgcaaaagagagtcatttgcacagacattttgtggacccaatgttgagt
caattgcagaagccacctcaagagactggagagcgactaagcaaatataaagaagaacat
agacggatacttcaagagagtattgaagttgctccttttacagctaaaatcaaggctctt
gagggtgagagagagaattattctagagtaacgccattatcgtcttctagccccaaaagc
tatgcagtgaaacatgacaaagaaccagagcgttctgtgtcagaactttataaaatcaag
cattcagcaccacagagtttgccacaaagtaactatttcaccaccttgtcaaacagtgta
gtgaacgaaccaccaagatcctacccatctaaggaagtttcaagtttgtatgtcgataaa
cagaatagttgtctttcaacagcagctaatccccagtctctcacttcttttatttcatct
ctttcaaaacctccacctttgattaagcatcaaccagagggtgaaggttcggtaagcaag
ataacagagcagctttcccatcaagtgacatctcactctgtaaattcttttagaagtgac
tgcagaagccctactcagttgtcagtttcatcttcaaatactctccgaagcatgcctgcc
ttacacagagcaccagtgtttcaccctccagttcatcaaaacctggagagaaaggaaagc
agctatagcagtctttcacctccaaccctaacaccagtgcagccagttaatgctggtggc
aaaatccaagaattacaaaaaccaccaactttagtacctgaacctaaggaagcgcaaaca
atgtacaaaagcacttctgaccagaatttatcagatatttggaaatctaataatgcccca
aacaacgaaaaagttgaatggcatgttgagcgaaccagtggaaaaacgcaatctgccaca
gcatctgtcattgtacgtccaccttctagtacaaaatatgatagtatgccaggaatgcag
tcagctcccaaagatcgagttaatgaaagatcttcttcaactgggacaaatcaaacagaa
tgcgtaaaacctgtggaagccagagacactggaagaataattctgccaaatatgaactca
gagactacacacacacattatgaaaagaactttccgtctgtctcacaaggcagcattccc
agttctgtcacacctaccacaactatagtatgcagtaccaaaacagatgtaaccacatct
gcagccacaactaccggtgtttcaagctggggtagttcagaagtgacttattctttatca
aacacagttttggcctgcacaccactggaatgtacctcctctagaacagtaagtcaggta
gtggcacagacacaagaaagcaaggtcagtaccacagctccaattacaccagccagtggc
aagacaggaagtgccattcagcccaactctggattttctggcccaactgattttatccat
ttgaaaaagcacaaggcagcattggctgcagctcaatttaaaagtagtaatgccagtgag
attgagtccaatactgtgaaaaatcagacatttccagcctccatttccctagacagtgct
atcgtctgcaatacaataaacaaagccaactgtgtaggcaatgggcaggcttcccagaca
agtcagctgaactaccacacaaaactgaaaaaggcttggcttactagacattcagaagaa
gataaaaacactaataaaaaagagaattcagggaattatgtatcagaaattattaaacca
tgtactgtcaatttaatagcttctacatctagtgatttacaaaataacatagatagtaca
atcctagcagataaatttgtgaaagaagataaacacacaagaagaaaagcaaaaaggact
tacgaatctggctctgaatgtggagactctgatgaaagtgagagcaagtcagagcaaagg
actaaacggcagcctaagccaacttacaaaaagaaacaaaatgatttgcaaaagaaaaag
ggtgatacagaggaagaagtaaaacccaatggtgttcttagcaggagtgccaaagaaaga
agcaagttgaagttacagagcagcagtaacagcactggaatacctcgttcagtattaaaa
gactggcgcaaagtaaagaagctgaagcaaactggagaatcctttctgcaggatgactct
tgctctgaaatagggcctaatctgcagaaatgcagagaatgtagactcattagaagtaag
aaaggtgaagaaccaactcactcgccagtattttgtagattttattactttcgtcggttg
tcttttagtaagaatggagttgttaggatagatggtttctcttctcctgaccaatatgat
gatgatgcaatgagtttgtggacacatgacaattatgaagatgatgaagtggacctagag
acttctaaatacattttagacatcataggtgataaattttgtcagctagtaacatctgag
aaaacagccatgtcctgggtgaagaaagatgccaaaattgcctggaagagagcagtgaga
ggagtccgtgagatgtgtgatgcatgtgaagccacgttgtttaacattcattgggtctgc
caaaaatgtgggtttgtggtctgcttagattgttataaagcaaaggaaaggaagagttct
agagataaagaattatatgcttggatgaaatgtgtgaaaggacagcctcatgatcacaag
catttgatgccaactcagattattccaggctctgttctgacagatcttctagatgccatg
catagtcttagagagaaatttgagattaaatcctattgtcagtgtaccagcaaacagagc
atacaaactgggaagttccctgcaatgaatggtgtctctcaggttttacagaatgtcctt
aatcacagtaataaaatttctctgtgcatgcctgagtctcagcagccgaatacccctcaa
aagtctgagacaaatggcaatacaagtccagggagtgatgtaagtgcagacagcaagtta
actccaccagaatcccagtctccactgcattggttagctgatctagcagagcaaaaagcc
agagaggaaaagaaagaaaataaagaatgtcttcctggaaaacatactaaagaagagaga
gaccaagagagttcagagtctctaaattgtaaaacatctcctcctgtgtcccagaacaac
gaacagggctcaaccttacgagacctactgactacaacagctggcaaactgcgtctgggc
tctacagatgctggcattgcttttgctccagtttactctacaggcacaacaggtggcaaa
ggtggaaggactatgccaaacattcttgatgacataattgcttcagttgtagaaaacaag
attccaccaaatagaccaccaaagataaatgtaaaatctgaactgaaggatgggccaaaa
gatggtcaaaaatctattctggatgattgcagtaaattctacagcggtattccacattcc
tggatctgtgataagcatattttgtggctcaaagatcataaaaacagcagcaactggaag
ctctttaaagagtgctggaaacaaggaaagcctgtattagtgtctggagtgcacaagaag
atgaacatcaacttgtggaaggcagagtcaattagcctagattttggagaccacaaagct
gatctgctaaactgcaaagacagcattatttcaaacaccaatgtcaaggaattctgggat
ggttttgaagaagttgcaaaacggcaaaaaataaaaggtggggaaacagttatattaaaa
ctgaaagactggccctctggtgaagacttcaaggctatgatgcctgcaaggtatgaagac
ttattaaaaagtttaccactgccagaatattgtaacccagaaggaaaattgaacttggct
tcccatttaccagggttttttgtacgtccagatttgggacccagattatgcagtgcgtac
ggtgtggctgctgctaaagatcaagatataggaactacaaatctccatgttgaagtttct
gatgtagtgaacatccttgcctatgtgggcatagcaaaaggaaatggagtactctcaaaa
gcaggagttttaaagaagtttgaagaagaagatttggatgaccttttaaggaaaagattg
aaagactcaagtgaattacctggggctttgtggcacatttatgctggcaaagatgttgac
aagataagagaatttctgcaaaagattgcaaaagaacagggtctagaagttttaccagag
catgatccaatacgtgaccagagttggtatgtgaacaaaaaacttcgccaaagacttctt
gaagaatatggagtaaaaacctgcactattattcagttccttggtgatgctgttatttta
ccagcaggagcccttcatcaggtgcaaaattttcacagctgcattcaagtaactgaagac
tttgtgtctccagaacatcttgtacagtcatttcacttaacacaggaactgaggctgtca
aaagaagaaatcaattacgatgataaaatgcaggttaaaaatatcttgtatcacgcagtt
aaggaaatggtgagagctttgaagattcatgaaaatgaaatggaagatgtggaagagaac
taa
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integrated database retrieval system
