Caretta caretta (Loggerhead turtle): 125639606
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Entry
125639606 CDS
T09292
Symbol
CHL1
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125639606 (CHL1)
Cell adhesion molecules [BR:
ccay04515
]
Immunoglobulin superfamily
L1 family
125639606 (CHL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Ig_4
Receptor_2B4
Ig_PDGFR_d4
C2-set_3
Ig_6
Motif
Other DBs
NCBI-GeneID:
125639606
NCBI-ProteinID:
XP_048713047
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Position
7:12748551..12944334
Genome browser
AA seq
1225 aa
AA seq
DB search
MEILLSTKRINICLLFFVLNLAEGIEIPLSVAQVPTITDQSMTQVAYPFDEDFTIKCEAK
GNPQPTFNWTKDEKPFSLLSDPRIIASRNSGTFVIQNQGIIADFQGKYRCYASNELGTAM
SEEIEIIVPSVPKFPKEKIEPIEVEYGDAVVLHCNPPRGIPPLHIYWMNIDLQHIPQDER
VSMSLKGDLYFANVEENDSRSDYCCFAAFPRLRTIVQKMPMTLMVTRIKHTNDSSSPNAA
VTKANFIKERKPKILIPPESSGSSSSVTVIKGGVLLLECIAEGLPTPHLNWIKAGRDLPK
DRAVTESFGKVLKIEQVSAADEGTYECTASNSVGRVKHEFQVHVEEPPQWIKKPTSDVYS
IKSTALLLCEATGKPEPTIKWKRNGIPIDKRTYRGRVSAGEISITNLQLQDSAVYQCEAT
NKHGAILATANVNVLNIAPLVITSDSEDYATVVGFNAFLHCQVFASPPAVITWMRDDSTM
PLEGLRYTVYENGTLEIRETKKEDSGSYTCWVTNLVGKSAITANLGIRDATKLVVTPENP
QVLKSHSVLLKCQSEYDSHLKQSFKLSWRKDGDELQINSTEDGRIITEMDTLFISSVTLE
DQGVYTCVASTSLDSVTAESQLIVLDVPDPPEELLLSEKQNRSVRLSWKAGDSHNSPIYE
SIVEFEVNRWEPGKWQELTRIPGNNTTVVLSLAPYMNSQFRVISVNDVGRSKASASSARY
ETPPTAPDKNPENIRVEASEPNEMVMKWEPLKPMEQNGPGLEYKVSWRQQGVETDWNEET
VKKHSLTLRNTPTFVPYDIKVQAVNNFGSGPEPNVTTGYSGEDIPDAAPSSVMVEVMNST
LVKAIWSSIPRDRVRGHLKGYKVIWWKIRSLLDGKHHHPDKHFLTFTGDRNYGMIPGLEP
FSEFHLTVLAFNAKGSGPESSPTVFQTPEEVPEQPRFLRLLNEDKDSVTLSWGLPRKPNG
FLTGYILQYQIINETDEIGALNDFNITNPSTFSWRISNLSSSTKYKFYVRACTIKGCGKP
ITEEGLTMTEGSKGIGKISEAVNPTQKFHPIEALEPGTEYTVRLVTKNWVDNNSIFEDVI
ETRERAYAGIYEGISTQGWFIGLMCAIALLTLLLLTMCFVKRNKGGKYSVKEKEDLHPDP
EAQSIKDEIFGEYSDSDEKPLKGSLQSLNGDIKATESADSLVDYGEGDQGMFNEDGSFIG
AYAGSKEKGSVESTGSSTATFPLHA
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggagatactattaagcacaaaaaggatcaacatatgtctgcttttctttgtattaaat
ttggcagaaggtattgaaataccattatcagttgcacaggttccaacaattacagaccaa
tccatgacccaagttgcatacccttttgatgaagactttacaattaaatgtgaagctaaa
ggaaatccacaacccacttttaattggactaaagatgagaaaccattcagtctactatct
gaccccagaataattgcatccagaaattcaggaacctttgtgatccaaaatcaggggatc
atagctgattttcaagggaaataccgttgttatgcttcaaatgaactgggaactgccatg
tcagaagaaatcgaaataatagttccaagtgtaccaaaattcccaaaagaaaagattgag
ccaattgaggtagagtatggtgatgctgtggttttgcactgtaatcctcccagaggaatt
ccacctttgcatatctattggatgaatattgatttacaacacattccacaagatgaaagg
gtctccatgagccttaagggagatctatacttcgcaaatgtggaagaaaatgacagtcga
agcgattattgttgctttgcagcatttcccaggctgcggacaattgtacagaaaatgcca
atgacactgatggttacacgtattaaacatactaatgactcaagctcacctaatgctgct
gttactaaggctaatttcatcaaggaaagaaaacccaaaatactgataccacctgaatct
tctggtagcagctcatcagttactgtcatcaaagggggagttctactacttgaatgcatt
gctgaagggctcccaactccgcatcttaactggatcaaggctggtagagatttgcccaag
gacagagcagtgacagaaagttttggaaaggttttgaagatagaacaagtatctgcagca
gatgaaggaacttatgagtgcaccgcaagcaattctgtggggagagtgaaacatgagttt
caagttcacgtggaagaacctcctcagtggataaagaaacccacaagtgatgtttacagt
ataaagtcaactgctttactattgtgtgaagctactggcaaacctgagccaactataaag
tggaaacgtaatgggatacctattgataaacggacctataggggcagagtctctgctggg
gagatcagcattaccaacctacaactgcaggacagtgcagtgtatcagtgtgaggcaact
aacaagcatggtgccatccttgccactgccaatgtgaatgttttaaatattgctccatta
gtgataacctcagacagtgaagactatgccacagttgttggtttcaatgctttcttgcac
tgtcaagtttttgcttcacctcctgctgtcattacttggatgagggatgacagcacaatg
ccacttgaaggtctgcggtacactgtatatgaaaatggcactttggagatcagagagaca
aagaaagaagattctgggtcgtacacttgttgggtgacaaatttggttggaaaaagtgca
atcactgccaatctgggtatcagagatgctacaaaacttgttgttactcctgaaaaccca
caagtgttgaaatcacattcagttttattgaaatgtcagtctgaatatgactcacacttg
aaacaaagttttaaattatcctggaggaaagatggagatgagttgcaaatcaacagcaca
gaagatggcaggataattactgaaatggatacgttgtttatatcaagtgtgacattagag
gatcaaggcgtttacacctgtgtggctagtacatctctggacagtgtcacagccgaatcc
caattaattgtccttgatgttcctgacccaccagaagagctacttctctcagaaaaacag
aacagaagtgttagattatcctggaaagcaggagacagtcacaacagtcccatttatgag
tccattgtagaatttgaagtgaatcgttgggagcctgggaagtggcaggaactcacaaga
atcccagggaacaacacaaccgttgttttatcgttggctccttatatgaattcccagttc
cgtgttatatccgttaatgatgttggaagaagcaaggctagcgcatcatcagcacgctat
gaaacacctcccactgctccagacaagaacccagaaaacatccgagtcgaagcttctgaa
ccaaatgaaatggttatgaaatgggagccattgaaacccatggagcaaaatggaccggga
ctggagtataaagtcagctggcgacagcagggagtagagacagactggaacgaggaaact
gtaaaaaaacattccttgacattgaggaatactcctacctttgtgccttatgatatcaaa
gtccaagctgtaaacaattttggatctggtcctgaaccaaatgttaccactggatattca
ggagaggacattccagatgctgctccttcaagtgtaatggtggaagtgatgaatagtaca
ctagttaaagcgatctggtccagcattccaagagaccgagttcgtggacacttaaaagga
tataaggtcatttggtggaaaataaggagtttgctagatggaaaacatcatcacccagat
aaacacttcctaacatttacaggagacagaaactatggcatgattcctggtctagagcca
tttagtgaatttcacttaactgttttggctttcaatgcaaaaggatctggacctgaaagc
tctccaactgtattccaaactccagaagaagtccctgaacagccacgttttctaagatta
ctaaacgaagataaggattctgtcactttgtcatggggacttcccagaaaaccaaatggc
ttccttactggctacattttgcaatatcagataataaatgagacagatgagattggagca
ttgaatgacttcaatattacaaacccttcgactttcagctggaggatttcaaacctgagc
tcgagcaccaagtataaattctatgtgagggcctgtactataaaaggctgtgggaaacca
atcacagaagaaggactaacaatgacagaagggagtaaagggatcgggaagatttcagaa
gcagtaaatcccacccaaaagtttcaccccattgaggcacttgagcctggtactgaatat
acagttcgtctagtgactaagaattgggttgataacaatagcatttttgaagatgtaatt
gagacgagggagagagcttatgctggcatttatgagggaatttccacccaaggctggttt
attggactgatgtgtgccatcgctttgcttaccttattgctgctaactatgtgctttgtc
aaaagaaataaaggaggaaaatactcagtgaaagaaaaagaggatttgcatccagatcct
gaagctcaatcaattaaagatgagatctttggggaatatagtgacagcgatgagaagcca
ctcaaaggcagcctccagtcacttaacggggacattaaagctacggaaagtgctgatagt
ttggtagattatggagaaggggaccaagggatgtttaatgaagatggttcatttattggc
gcttacgctggatctaaggaaaaaggatccgttgaaagcactggaagttctacagcaact
tttcctctccacgcataa
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integrated database retrieval system
