Caretta caretta (Loggerhead turtle): 125639671
Help
Entry
125639671 CDS
T09292
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125639671 (MMS19)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125639671 (MMS19)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125639671 (MMS19)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125639671 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
IFRD
Motif
Other DBs
NCBI-GeneID:
125639671
NCBI-ProteinID:
XP_048713207
LinkDB
All DBs
Position
7:complement(121702879..121725533)
Genome browser
AA seq
1025 aa
AA seq
DB search
MAAAGAGGTGGALRGWVRDFVAGQQDGRAAEVAAGVKAGSWTILEIVEALGSCLENTEPR
MRGRGLQLLSQVLLHCHSLLQEEEVTHLVLFCENRLKDHHLVIPAVLQGLHALSMCEVLA
PGLAVSVLKAIFQEVHVQSLPQLDRHTVYSIITNFMRTREEELKGLGADFTFGFIQVMDG
EKDPRNLLVAFQIVRDLILKDYVLGPFVEELFEVTSCYFPIDFTPPPNDPHCIQREDLIV
SLRAVLASTPQFAEFLLPLLIEKMDSEMQSAKLDSLQTLGACCTIYGQKELQEFLPSLWS
SLRREVFQTASEKVEAEALAALHSLAACLSRCVLSSDAEDLLDSFLSGILQDCRRHLCEP
DMKLVWPSAKLLQAAAGASFRAGHRITSSVVPLLLEQYHQHPQNSQRRTILEMLLGFLEL
QQKWGHEDEEESALLCSRAPLCSVLFSALTDPSVQLQLVGIQALTVLGTLPGLLAPPDVQ
LVVDHLTRLILHADDSQSCMAAMEAAGSLAPIYPGAFTGRMAQRLAEELQSEREEEGRQS
PHSLRARCLQALAAVSTHPRIVRETVPVLLQCLQQVPKGNVPVGACDLVAVCQSLQRVAL
QCQRDAESCWYCHRTVVPRLLAEAVQAAMQENAHSPLGKLLLEEDVLTAMVPVISAASAH
LCPELAAQSVSQVVPLFLDGEVSFLPQDSFPCPFQPFQGGQHMAAQRRLVALLMAFVCAL
PRNVPIPQQDRLLQELLALSCSCHCPFTATAAAKCFAGLVNKSPAGQQLDQLLETAVNRM
EAGLAEGPLRTQALTLLLWVTKALVLRYHPLSSRLTDKLLGLLGDAELGPAVADGFSLLM
ADSPDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHAAGPGVKANYLKGLSHVLNHLPRP
VLVTELPTLLSLLLEALSCPDRVVQLSTLSCLQPLLLEAPHVMSLHVDTLVTKFLGLTSS
PAMAIRIAALQCVHALTSLPIPVLLPYKPRVIRALARPLDDLKRLVRKEAVVARGEWFLL
GSPGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggtgctggggggacgggcggcgccctgcggggctgggtgcgggacttc
gtggccgggcagcaggacgggcgggcggccgaggtggcggcaggggtgaaagcgggaagc
tggaccatcttggagatcgtggaagccctggggtcctgccttgagaacacagaacctcgc
atgcgtgggcgaggcctccagctgctctcccaggtgctgctccactgtcactccttgctc
caagaggaagaagtgacgcacctggtcctgttctgtgagaaccggctgaaggatcatcac
cttgtgatccctgctgtgctgcagggactccacgcgctgagcatgtgcgaggtgctggcc
ccaggcctggctgtgtccgtgctcaaagccatcttccaggaggtgcatgttcagtccctg
ccacagctggatcgccacacggtctacagcatcatcaccaacttcatgcgcaccagagag
gaagagctgaagggcctgggcgccgacttcactttcggcttcatccaggtgatggacggg
gagaaggaccctcgcaatctgctggttgccttccagatcgtccgcgacctcatcctcaag
gactatgtgctgggtcccttcgtggaggaactctttgaagtgacgtcctgctacttcccc
attgattttactcctccccccaatgaccctcattgcattcagagagaggacctgattgtg
agcctccgggctgtgctggcctccacaccccagtttgccgagttcctgctgccgctgcta
atcgagaagatggactcggagatgcagagcgccaagctggactccctgcagaccctgggc
gcctgttgtaccatctacgggcagaaggagctgcaggaatttctccccagcctctggtca
tccctgcgcagggaggtgttccagacggccagcgagaaggtcgaggcggaggctctggct
gcgctgcacagcctggctgcctgcctgtcccgctgcgtgctcagctcagacgctgaggac
ctgctagactccttcctgagcggcatcctgcaagactgcagacgccatctgtgcgagcct
gatatgaagctggtgtggccgagcgccaagctcctgcaggcagcggcgggcgcctccttc
cgagccggccaccggatcaccagcagcgtcgtgcccctgctgctggagcagtaccaccaa
cacccgcagaacagccagcggaggacaatcctggagatgcttctgggcttcttggagctg
cagcagaagtgggggcatgaggatgaagaggagagcgccctgctgtgttcccgagccccg
ctctgctccgtgctgttctcggcgctgacggaccccagcgtgcagctgcagttggtgggg
atccaagccctgaccgtcctgggcacgctgccaggcctcctggctccccccgatgtgcag
ctggtcgtggatcacctgacccggctcatcttgcatgcggacgattcccagagctgcatg
gccgcaatggaggccgcaggatctctggcccccatctacccaggggccttcacggggcgc
atggcgcagaggctcgcagaggagttgcagtcagagcgggaggaggagggcaggcaatcc
ccgcactccctgcgggcccgctgcctgcaggcgctggcagcggtgtccacacaccccagg
atagtgcgagagacggttcctgtcctgctgcagtgtctgcagcaggtgccgaaagggaac
gtgccggtgggggcctgcgacctggtggccgtgtgccagagcctgcagcgggtggccctg
cagtgccagcgggatgccgagagctgctggtactgccaccggactgtggtgccccgcctg
cttgcggaggcggtgcaggccgccatgcaagagaatgcccattcgccactggggaagctg
ctgctggaggaggatgtcttgactgccatggtgcccgtcatcagcgcggccagcgcccac
ctgtgccctgagctggctgcccagagcgtctcgcaggtggtgcccctcttcctggatggg
gaggtctccttcctgcctcaggacagctttccctgccccttccagcccttccagggcggg
cagcacatggcagcacagagacgcctcgtcgccctgctcatggccttcgtctgcgccttg
cccaggaacgtgccgattccccagcaggacaggctgctgcaggagctgctggctctgagc
tgctcctgccactgccccttcacagccaccgcggctgctaagtgcttcgcggggctggtg
aacaagtccccggcagggcagcagctggaccagctcttggagacagcagtgaacaggatg
gaggccggccttgccgagggcccgctcagaacccaggccctcaccctgctcctctgggtg
accaaagccctggtgctgcgctaccatccgctgagctcccgcctgacagacaagttgctg
ggcctcctgggcgacgctgagctgggccccgcggtggccgacggcttctccctgctcatg
gccgactcccccgacgtgctgcacaaggggtgtcacgccgacgtgcgcatcatgttccgc
cagcgcttcttcaccgacaacgtgcccaagctggtccagggcttccatgccgccggcccc
ggcgtgaaggcaaattacctgaagggcctgtctcatgtgctgaaccacctgcccaggccg
gtgctggtgacggagctgcccacgctgctgtctctgctgctcgaggccttatcctgccca
gaccgcgtggtgcagctctccaccctcagctgcctgcagcccctgctgctggaggcgccg
catgtcatgagcctgcacgtcgacaccttggtcaccaagttcctgggcctgacctctagc
cccgccatggccatccgcattgctgcgctgcagtgtgtccatgcgctcaccagcctgccc
atccccgtgctgctcccgtacaagccgcgtgtgatccgggccctggccagacccttggac
gacctgaagcggctggtgcggaaggaggcggtggtggcccgtggggaatggttcctgctg
gggagcccaggcaggtga
DBGET
integrated database retrieval system
