Caretta caretta (Loggerhead turtle): 125639686
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Entry
125639686 CDS
T09292
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03410
Base excision repair
ccay03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125639686 (POLL)
03450 Non-homologous end-joining
125639686 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125639686 (POLL)
Enzymes [BR:
ccay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125639686 (POLL)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125639686 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
125639686 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT_2
BRCT
HHH_5
NTP_transf_2
PTCB-BRCT
HHH
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
125639686
NCBI-ProteinID:
XP_048713238
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All DBs
Position
7:complement(120297422..120317493)
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AA seq
584 aa
AA seq
DB search
MEPRGIVKAFPKRKKMRDDSERKVPPKVLKEEETGSIEEWLKPVTAYVLPAGIGQARAEI
FHKQIVQKGGRVCNQLSSEVTHVIVAEDMDCDRAFRLLRLAKLPLGTQLVKAAWLSFCIR
EQKLLDTTGYSIFIPDRYLEEGDLPKGQQQLLGSETVQPQPEKEALEQKAEAQTAAILPQ
GPAISVQRQVEEQSLQTQRGSDDEGSEGEETSVTQGDLEALISGRCPETSSGLSNDSCTT
VPPAAGKWVCAQSSDSKKENHNGHITEKLEVLGKAYTVQGDKWRALGYSKAINALKSYHK
PVTSYQEACKIPGIGKRMAEKILEILESGHLRKLDHISESVAVLEVFSNIWGAGVKTAQM
WYQQGFRTLDDIRTKAPLTSQQAIGLKHYEDFLERMPREEAKEIEQTVREAAQSLNPGLV
CMACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRQSGFLTDDLVRQEDSGNQK
KYLGVCRLPGPGQRHRRLDIIVVPHCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHA
LHAAVVRAPGGRKMGPGLVLPTPTERDVFTLLGLPYREPAERDW
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaggggaattgtcaaagcctttccaaagaggaagaagatgagggatgactca
gagaggaaggtccctccaaaggtcctgaaagaggaggaaactgggagcattgaagaatgg
ctgaagccggtcacagcctacgtgctgccagcgggcatcgggcaggccagggcagagatc
tttcacaagcagattgtccagaaggggggtcgcgtctgcaaccagctctcctcggaggtg
acacacgtcatagtggcagaagacatggactgtgaccgggcctttcgcctcctcagactg
gccaagcttcccctggggacccagctggtgaaggcggcctggctgagcttctgcattaga
gagcagaagctgctggataccactggatacagcatcttcatcccagacaggtacctggag
gagggggatctgccgaagggtcaacagcagctcctgggcagtgagactgtccaaccccag
ccagagaaggaagcactggagcagaaggctgaagcacagacagcagccatattgcctcag
ggcccagccatctcagtacagcgacaggtggaggagcaaagccttcaaacacagaggggc
tctgatgacgaaggaagcgaaggggaagagaccagcgtcactcagggagacctggaagca
ctaatttcaggacgttgccctgagacctcatcggggctgtccaatgacagctgtaccaca
gtgccccctgctgctggcaagtgggtttgtgctcagtcctctgacagcaagaaagagaat
cacaacgggcacatcacagagaagctggaagtgctgggaaaagcctacaccgtacagggg
gacaagtggagggctctgggctactccaaagccatcaatgcactcaagagctaccacaaa
ccagtcacctcttaccaggaagcctgtaagattcctgggatcgggaagcgaatggcggag
aagatcctggagatcttggagagcggccacctgcgtaagctggaccacatcagcgagagc
gtagcagtgctggaggtcttctccaacatctggggagcaggagtcaagacagcccagatg
tggtaccaacagggcttccggaccctagacgatatccgcaccaaggctcctctgaccagc
cagcaggccatagggttgaagcactacgaagacttcctggagcgtatgccacgagaggag
gctaaagaaatagaacagactgtgcgagaagcagcccagtccctgaaccctgggctggtg
tgcatggcgtgcggctcgtaccgacgggggaaggccacctgcggcgatgtggacgttttg
gttacccaccctgatgggcagtctcaccgcggcatcttcggcaagctgcttgacagtctc
cggcagagcggtttcctcaccgatgacctggtgagacaagaagacagcggcaaccagaag
aagtacttgggcgtgtgccggctgcctgggccgggccagcgccaccgacgcctcgacatc
atcgtggtgccccactgcgagttcgcctgcgccctcctgtacttcaccggctcggcccac
ttcaaccgctccatgcgagcgctggccaagaccaagggcatgagcctgtcggagcatgca
ctccacgccgccgtggtgcgcgcccccggcggccgcaagatggggcccggccttgtcctg
cccacccccactgagagggacgtcttcacgctgctggggctgccctaccgggagcctgcc
gagcgggactggtga
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