Caretta caretta (Loggerhead turtle): 125639891
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Entry
125639891 CDS
T09292
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125639891 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125639891 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccay02044
]
125639891 (SEC31B)
Membrane trafficking [BR:
ccay04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125639891 (SEC31B)
Secretion system [BR:
ccay02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
125639891 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
TPR_Sec16
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF12
Prp18
Motif
Other DBs
NCBI-GeneID:
125639891
NCBI-ProteinID:
XP_048713633
LinkDB
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Position
7:complement(54655454..54699245)
Genome browser
AA seq
1214 aa
AA seq
DB search
MRDSPCSQELRVVRRHRIQKMKLKEIERTAVQVWSPASNHPIYLATGTSAQQLDASFSTN
ATLEIFEIDFRDPSLDMKCRGILPASNRFHKLIWGSFGNGPSDSSGVIAGGGDNGVLTLF
SATQILTSGTEPVIGRREKHTGPVRALDFNPFQCNLLASGANDSEIYIWDLNNFSVPMTP
GAKSQPQEDISAVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKISDHSSRMHCSGMAW
HPEVATQLVLSSEDDRMPVIQIWDLRFATSPLSQLEGHTRGVLSISWCQADPELLLSSAK
DNQILCWNPCVGEVIYELPTQSQWCFDVQWCPRNPSVFSAASFDGWINVYSVMGGSLAAQ
QKTQADKISSSFNNLDPFGTGRTLPPLQVPEQVAQTTLIPPLKKPPKWIRRPVGVSFAFG
GKLITFGLSKAPAPQMQQSPPRQVFISQVVTETEFLARSRELQMALQSGNLLDYCQSKIQ
AAQLQFEENLWNFLKVNMEPESRAKLLKLLGYSKEELQKKITSCLGNGIPEKQNFPEADG
LAQTAQPAQGSRRCVTEVGTASSSSGFFDSLVPQDMSTLEIPVTTDTDGLISQALLVGNF
AGAVKLCVRADRFADAIILAIAGGETLLRETQMQYFAKRKTKISQLLSSIVQQNWQEVIC
TCDLQSWKEALAILLTYSKQEEYALLCDMLGTRLESEGEGLLSSEACLCYISSGNVERLA
KCWVKNHETTSPLALQDLVEKVMVLSRSVEMLRGSVGPTLGPVLAERVTQYASLLASQGC
LAAAMSYLPRSSDEFLIQQLQDRLFHAQGESMGDQQPPPFPYAPVHVGPVSHPLPAAKSS
SAPEASAHRPSPRHPEKPMYQPSFTLPGSVQSSVPSLFTPQPVPMAPPQASTAPPTSMYS
RAGGQPPYSQYTSGLAPATVPGPALSQPPPLSLPGARFTGPAAFPNQPPISGQPGPVARP
GIPPPGSTFFPPASVPAQRPAAACPLPMAGQSPMLFPSAPFSCPPGVGYPQGGPGAPSIP
PPPTGQESWNDPSALRGGLQKKKLSEKFTPPAPITAPVMSLPTEPRALLPQVPRSQEPGQ
APPGAPKEGSMQFPQLPTERIERKELPPEHQGLKTTFEGLVQRCSAVATDPKTKRKLEDA
AQRLECLYEKLREQALSPHILMGLHEMARCMEARSYQQGLLVHTQVVGSSSFSEVSGFMP
ILKVLMTVASKLNV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgagagacagtccctgctcccaggagcttagagtcgtcaggcgacaccgaatccagaaa
atgaagctaaaggaaattgagcgaacagctgttcaggtgtggagtccagcaagcaaccac
cccatctacctagcgacaggaacatctgctcagcagctggatgcctccttcagtacaaat
gccaccctggaaatctttgagattgacttcagggacccttccctggacatgaagtgcaga
ggaatccttcctgcttccaacaggtttcacaagctgatctggggcagctttggaaacggg
ccttctgattcctctggggtgattgctggtggaggggataatggagtgctaacgctgttc
agcgcaacccagattctgacatcagggacagagcctgtgatcggacggagggagaagcac
actggccccgttcgagctcttgactttaatcctttccagtgtaacctcctggcctctggg
gccaacgattctgaaatttacatctgggacttgaataatttcagtgtgccaatgacgcca
ggggctaaatctcagcctcaagaagacatcagcgcggtgtcctggaatcgtcaggtgcag
cacatcctgtcctctgctcaccccagtgggaaggccgtcgtgtgggacctcagaaagaac
gagcccatcatcaaaatcagcgaccacagcagcagaatgcactgctcgggaatggcctgg
cacccagaagttgctacccagctggtcctttcctctgaggacgaccgcatgccggtgatc
cagatatgggacctacgctttgccacctctcctttgagccagctggaggggcacacaagg
ggagtcctgtctatctcttggtgccaggctgaccctgagctccttctcagtagtgccaaa
gacaaccagatcttgtgctggaacccctgcgttggtgaggtgatttatgagctgcccact
cagagccagtggtgctttgatgtccagtggtgccctcggaatccatcagtcttctccgct
gcctctttcgatgggtggatcaacgtttattctgttatgggtgggagcctagcagctcag
cagaagactcaagctgacaagatctcctcctcctttaacaacctggaccccttcggcacg
ggacggacccttcctcctcttcaggtgccggagcaggtggctcagaccaccttgatccct
ccactgaaaaagccccccaagtggattcgcaggccggtgggggtctcgtttgcatttggg
gggaaattaatcacgtttggcctctccaaggccccagcaccgcaaatgcagcagagtccc
ccacgccaggtgttcatcagccaggtcgttactgagacggagttcctggcccgatccaga
gaactgcagatggccctgcagtcgggaaacctcctggactattgccagagcaagatccag
gcagcccagttgcagtttgaagagaatctctggaacttcctgaaggtgaacatggagcca
gaatccagggctaaactcctgaagctgctgggttatagtaaagaggagctgcagaagaag
atcacgtcctgtttggggaacggtatcccagagaaacagaactttcctgaggcagatggc
ttggctcagactgcacagccggctcagggctcaagacgctgcgtgaccgaagtgggtact
gcttcctcctcttcagggttctttgacagccttgtccctcaggacatgagcacgctggag
atcccagtcacaacagacacggatgggctgatcagccaggcactcctggtggggaacttt
gccggtgctgtgaagctgtgcgtgagggctgaccgttttgctgatgccatcattctggct
atcgccgggggggagacgctactgcgggagacccagatgcagtactttgccaaacggaaa
acaaagatttctcagcttctttcctccatcgtgcagcagaactggcaagaagtaatctgc
acatgtgacctgcagagctggaaggaggcactggccatcttgttaacgtactccaaacag
gaggaatatgccctgctctgtgatatgctggggacccgtctggagtcagaaggcgagggg
ctgctgtccagcgaagcctgcctatgttacatctcatctggcaatgtggagaggttggca
aaatgctgggtaaaaaaccacgagaccacatcgcccctagctctgcaggacctggtggag
aaagtgatggtgctgagcaggtccgttgagatgctccgaggctccgtggggccaaccctg
ggccctgtcttggcagagcgggtcacccaatatgccagcctcttggcatcgcaggggtgt
ttggctgcagcaatgagctatctaccccgcagctctgatgagttcctgatccagcagctc
caagaccgtctcttccatgctcaaggggagagcatgggcgatcagcagcctcctcctttc
ccctatgctcctgtgcacgtcggaccagttagccacccattgccagcagccaagagcagc
tcagctccggaagcgtcggcccacagaccaagtcccaggcatccagagaagcccatgtac
cagccatccttcacccttccagggtcagttcagtcttcagtgccttcactcttcacgcct
cagccagtgcccatggctcctcctcaggccagcactgccccccctaccagtatgtactcc
agagcaggaggccagcccccttacagccagtacacctctggcttagcaccagctacggtt
ccagggccagcattatcccagcctccaccattgagcctgccaggagccagattcactgga
ccagctgcctttcccaatcagcctcctatttcaggacagcctgggcctgttgcacgccct
ggcattccaccaccaggatcaaccttcttccctccagcctcggtccctgcacagcgtcct
gctgcagcctgtcctctccccatggcggggcagtcccctatgcttttcccttcagctcct
ttcagctgccccccgggtgtgggctaccctcaggggggccctggagctcctagcatccct
ccccctcccactggtcaggaatcttggaacgatccctctgctctcaggggaggccttcag
aaaaaaaagttgtcagagaagttcacccctccagctccaatcacagctccagtaatgagc
ctccctacagagccacgggccctgctgcctcaggttcccagatcccaggaacctggccag
gcacccccgggagcacccaaagaaggcagcatgcagtttccccagctgcccacagagaga
atcgagaggaaggagctgcccccggagcaccaggggctgaagaccaccttcgaagggctg
gtgcagcgctgcagtgccgtcgccaccgatcccaaaaccaaaaggaaactggaggatgcg
gcgcagcggctggagtgcttgtacgagaagctccgggagcaggccctctcccctcacatc
ctgatggggctgcacgagatggctcgctgcatggaggcccgcagctaccagcagggcctg
ctggtccacacccaggtggtgggcagcagcagcttcagtgaggtgtctggcttcatgccc
atcctgaaagtcctcatgaccgtcgccagcaagctgaacgtctag
DBGET
integrated database retrieval system
