Caretta caretta (Loggerhead turtle): 125639967
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Entry
125639967 CDS
T09292
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125639967 (AFF3)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125639967 (AFF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
125639967
NCBI-ProteinID:
XP_048713894
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All DBs
Position
1:117516855..118015726
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AA seq
1260 aa
AA seq
DB search
MDSFDFALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQEDGSFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGIPQAPVNKTDEHFIADSRPQP
QPSICSTSSSIPAALSGQQSKSPTMGWQKAGQNASDGQQRASKHGHRLLESHNSDFKMAN
QKTGLEKLKHFASSPTSSSVSAAQQGTLRSVLGDSVSKAQQQSKLNCSVEVGSQAQERPA
KHSSAHCVQNFPPSLASKPNIVQQKPTAYVRPMDGQDQAPDDSPKLKLSAEANKHCTSYR
GVPSNKPDPAVAKTKMAIFSTPKQEEESGTGDNSCIEEILREMTHSWPPPLSAIHTPGKV
EQSKFPFPNKESQQVSTGHSNPSKQCFGETLPASLEGLETSDAGKGDAEPKNPENSASHT
SMLEDDLKLSSDEEENGQQAAQRSALRVLSDSTVVPQPSSRTSGVSSKRSSSSSSSESES
SSESDSESESSSSESDGSKPSHYSSPEPEQPSSNKWQLDKWLNKVNPHKTSILNQNDNHG
LESNQYYSRIKEEGQECEKIPAICQTDLRDKEIKNSSKEELRPRTANKAPGNKGGKQKSP
PTAAAVSGDSGPQRRTTCKKQPRRTERTSGGDALNCHTSEDLALSQVFLENNICEQPKAR
PCNNRTGHRKEPRSVAACEKRRTRGPSKTAPKSKEFIETESSSSSSSSDSDSESEQEEYH
LPKPQTVASASGGSDQRLKDSLSGNTNKTNSSCSAFGSINARTSNDIAKELEEQFYTLVP
FGRNELLSPLKDNDEVKSLWVKIDLTLLSRIPERLPEEPLAMSTGAKEEASLQQNNCTYL
PSEKVVPKSRRKRKCENEEEDREIKKTHLEQECSSRLIASALGISTANHCNRNEHSLAIP
INKNEKMLRSPISPLSDVSKHKYSNDDLTSSSRPNGSSLLPSMSSSKKHKSEIQPQPHPA
DCNKAVHINSESVLCNKPHSQTESWPSLSRAHKDCRTKLIFDDIPRNADHFMQEAKRKKH
KADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHT
GPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGA
SGKSTGTPSPMSPSPSPVSSVGSQGSTGAPSPSSTISIPQRIHQMAANHVSVTNSILHSY
DYWEMADNLAKENREFFNELDALMGPVTLHSSMEHLVQYTQQGLHWVRNSAHAKDCVPFK
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttcgccctgctccaggaatgggacctggactccctctgtgtctat
gaaccagacagaaatgttctgcggaggaaagaatgggagaggagaaatcaggaggcacag
caggaagatggttcatttaataccagttactccctcttcagtgaaccgtacaagactaac
aagggggatgagctctcaaatcgtatccagaatacattaggtaactatgatgaaatgaag
gacttattgacagatcgatccaaccagagtcatcttgttggagttccaaaacctgggatt
ccacaggcacctgtgaacaaaactgatgaacatttcattgcagattcaagaccacagcct
cagccttccatctgcagcacttcatcatccataccagcagctctatctggtcagcaaagc
aagagccccacaatgggttggcagaaagctgggcaaaatgcttctgatggccagcagagg
gcaagcaagcatgggcacagattgcttgagtcacacaatagtgacttcaaaatggctaac
caaaaaactggtctggaaaagcttaaacactttgcatcgagtcccacatcgtcatctgtc
agtgcagcacaacaaggtactttaagatccgtgcttggagacagtgtcagcaaagcacaa
cagcagtcaaaactaaattgcagtgtagaagtaggctctcaggctcaagaaaggccagca
aaacacagcagtgcgcactgtgttcagaacttccctccttcactagcttcaaagcctaat
atagttcaacagaaaccaacggcttatgtaagaccaatggatggtcaagatcaggctcct
gatgattctccaaagctaaagttatcagcagaagctaacaagcactgtacatcatatagg
ggagtaccttctaataagcctgacccagctgtggccaagaccaagatggcaatatttagc
actcccaagcaagaagaggagagtggaacaggagataacagctgtattgaagaaattttg
cgggagatgacccattcctggcctccaccactctcagctattcacacacctggaaaagtg
gaacagagcaagtttccatttccaaacaaggagtcgcagcaggtgtctacaggacacagc
aatccaagtaagcaatgtttcggtgaaaccctccctgcaagcctagaaggcctagaaaca
tctgatgcagggaaaggtgatgctgagccaaagaatccagaaaacagtgcatcacataca
tcaatgctagaagatgacctcaagttaagtagtgatgaagaagagaatggccagcaggca
gcacagagatctgctctccgcgttctgtctgacagcactgtcgtgccgcagccgagtagc
agaacctcaggagtctccagcaagaggtcaagtagcagcagctccagtgaatccgagagc
agttcagaatctgactcagagagtgaaagcagttcgagtgagagtgacggcagcaagccc
tctcattactccagcccagagcctgagcagccatcatcaaacaaatggcaattggataaa
tggctaaataaagttaatcctcacaaaacatctattcttaaccaaaatgataaccatgga
ctggagagcaatcagtattacagcagaataaaggaggaaggacaagagtgtgagaaaata
ccagctatttgccaaactgacctcagagacaaggaaattaagaactccagcaaagaggag
ttgaggcctagaactgctaataaagcaccaggaaataaaggagggaagcagaaatcacct
cctacggctgctgctgtttctggagacagcggccctcagagaaggacgacttgtaaaaaa
cagccaagaagaacagagaggacctctggtggggatgccttgaactgccatacatctgag
gatctcgctttgagccaagtatttttggaaaataacatctgtgaacaacctaaagccagg
ccctgcaacaacagaactgggcacagaaaagagccccgttctgttgctgcatgtgaaaag
agacgtaccagagggccaagcaaaactgcacccaaatccaaggaatttatcgagacagag
tcttcgtcttcatcatcttcctcagattcagattcagaatccgaacaagaggaatatcat
ctgcccaaacctcaaactgtggcctctgcttcaggtggaagtgaccagaggttgaaggac
tccttgagcggtaacaccaacaaaactaacagcagctgcagtgcctttggctccattaat
gccaggactagtaatgatatagcaaaggagctggaggaacagttttatactctagttcct
tttggcaggaatgagctcctatctcctctgaaagacaatgatgaggtaaaatcactgtgg
gtcaaaattgatttgactcttttgtccagaattccagagcgtttacctgaggagccactg
gcaatgagcactggagcaaaagaagaagccagccttcagcagaataattgtacttaccta
ccatcagaaaaggttgtgccaaaatctagaaggaaacgcaagtgtgaaaatgaagaagag
gacagggagatcaagaagactcatttagagcaagagtgttcttcacgattaattgcctct
gccctaggtatttcaacagcaaatcattgcaacaggaatgaacatagcttggcgatacca
ataaataaaaatgagaaaatgcttcggtctcccatctcacccctctctgatgtatcaaaa
cacaaatattccaatgatgatttaacttcttccagtagacctaatggcagcagcctatta
ccttccatgtcctccagcaaaaaacataagagtgaaatccagccacagccacatcctgca
gactgcaataaagcagttcacatcaattcagaaagtgttctctgcaacaagccacactcc
caaacagagtcttggccatctttatccagggcacacaaagactgcagaacaaagctcatc
tttgatgatataccacgcaatgcagatcactttatgcaagaagctaaacggaagaagcat
aaagcagatgcaatggtggagaaatttggaaaggcgctgaattacgctgaagcagcatta
tcatttattgaatgtggaaatgctatggaacaaggccccatggaatctaaatccccttat
acaatgtattcagaaacagttgaacttatcaggtatgctgtgagactaaaaacccacaca
ggacctaatgccactccagaggacaaacagctagcagcattatgttatcgctgtttggca
cttctgtactggagaatgttccgactcaaaagagaccacgctgtaaagtattcaaaagca
cttattgattatttcaagaattcatcaaaagctgcccaggctccatctccatggggtgcc
agtggaaagagcacaggaactccatcccccatgtctcctagcccttctcccgtcagctct
gtaggatcccaggggagcaccggtgccccttccccctcttccactatcagcattccacag
cgtattcatcagatggcagccaatcacgtcagtgtcaccaacagcatcctgcacagctat
gactactgggagatggctgacaatctagccaaggaaaatagagagttttttaatgagttg
gatgcattgatgggacctgtcaccctacacagcagtatggagcatttagttcagtacact
caacaaggacttcactgggtacggaatagtgctcacgcaaaagactgtgtgccattcaaa
tga
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