Caretta caretta (Loggerhead turtle): 125639971
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Entry
125639971 CDS
T09292
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125639971 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125639971 (VTI1A)
Membrane trafficking [BR:
ccay04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
125639971 (VTI1A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
DUF1664
Peptidase_S46
CAP59_mtransfer
DegQ
DUF6730
Motif
Other DBs
NCBI-GeneID:
125639971
NCBI-ProteinID:
XP_048713904
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All DBs
Position
7:complement(111739762..112088612)
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AA seq
238 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITGRIGKVPKLLGDEKKQMVANVEKQLEEARELLEQMELEVR
EIPAQSRGMYSSRMRSYKQEIGKLEADFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSQDREKIQRSRERLRETDAN
LGKSSRILTGMLRRKIQKCYTDLPSESSIDLKFTKQINEESNICFTSLAQVLTLRCKA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacttcgagggctacgagcaggacttcgcggtgctgacagcggagatcacg
ggcaggatcgggaaggtgcccaagctgctgggcgatgagaagaagcagatggttgcaaat
gtggagaaacagctagaagaagcaagagagctgcttgaacagatggaacttgaagttcga
gaaatccccgcccaaagccgaggaatgtatagcagcagaatgaggagctacaaacaagaa
ataggaaaacttgaagctgattttaaaaggtcacggattgcctacagtgacgaggtgcgg
aatgagctcctaggggatgatgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaaccgagcagattggacaggaaatgttggaaaacctg
agccaagacagagagaagatccagcgttctcgggaaaggcttagagaaacagatgcaaac
ttgggaaagagctccaggatcctaaccggaatgttgcgaaggaagatccagaagtgttac
accgacctgccctctgaaagttctattgacctgaagtttactaaacaaataaatgaggaa
agcaacatctgtttcacatccctggcacaagttctgaccttgagatgtaaagcctga
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