Caretta caretta (Loggerhead turtle): 125640039
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Entry
125640039 CDS
T09292
Symbol
POC1A
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125640039 (POC1A)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccay03037
]
125640039 (POC1A)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125640039 (POC1A)
Cilium and associated proteins [BR:
ccay03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125640039 (POC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_Vps41
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
RMC1_N
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Cytochrom_D1
PROPPIN
Nucleoporin_N
Beta-prop_WDR11_2nd
WDR54
PAN2_N
RIH_assoc
Motif
Other DBs
NCBI-GeneID:
125640039
NCBI-ProteinID:
XP_048714045
LinkDB
All DBs
Position
7:complement(44031708..44143360)
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AA seq
406 aa
AA seq
DB search
MAAACLEDPSLEKHFKGHRDAITSVDFSLNKKQLASGSMDSCLMIWSMRPQMRAYRFVGH
KDAVMCVQFSPSGHLVASGSRDKTVRLWVPNVKGESTVFKAHTATVRSVQFSSDGQSLVT
ASDDKTVKVWTVHRQKFLFSLSQHINWVRCAKFSPDGRLIASASDDKTIKLWDKTSRECI
HSFCEHGGFVNHVDFHPSGTCIAAAGTDNTVKVWDVRMNRLLQHYQVHSAVVNCLSFHPS
GNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT
NVDAADYGDVLKTQKYATNVTGTLHNLQSEMDCGDPPKKNKTQESARNQHQQEEETSLAD
TLEHIVGQLDVLTQTVSILEQRLTLTEDKLKECLENQQKLMHSKGN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctgcctggaggatccgtctctggagaaacactttaaaggccatcgagat
gccatcactagtgtggatttcagtctcaataagaagcaattggcaagtggctctatggat
tcgtgcttgatgatctggagtatgagaccgcaaatgagagcctatcgctttgtgggtcac
aaagatgcagtgatgtgtgttcagttttcaccttctggccatctggtggcctcaggctcc
agagacaaaactgtccgtttatgggttccaaatgtcaaaggagaatctactgtgttcaag
gctcatacggcaactgtaagaagcgttcagttctccagtgatggacaatccttggttaca
gcttctgatgacaaaacggtcaaagtatggacagttcacagacagaaatttctcttttcc
ttgagccagcacataaactgggttcgctgtgccaaattttctcctgatggaagactaata
gcttctgccagcgatgataaaactatcaaactatgggataaaaccagcagagaatgtata
cattctttttgtgagcacggtgggtttgtgaatcatgtggattttcatcccagtggtacg
tgcattgctgcagctggtacagataacacagtgaaggtgtgggatgttaggatgaacaga
ctcctccagcattatcaagtacacagtgctgtggtaaattgtctttcctttcacccctct
ggaaactacctcattactgcctccaatgattcaacccttaaaattctggatttactagaa
ggaaggctgctgtatactcttcatggtcatcaggggccagctacctgtgttgccttctca
agaactggggacttttttgcttctggagggtcagatgaacaggtgatggtatggaaaact
aacgttgatgctgctgattatggagatgtattgaaaactcagaagtatgccactaatgta
acaggaactcttcacaatctgcaatcagaaatggattgcggtgatcctcctaagaaaaac
aaaacacaagaatctgccaggaaccagcaccagcaagaggaggagacaagtcttgcagat
accctagagcatattgtgggacagttagatgttcttactcagactgtttccattctggag
caaagactgacactgactgaagacaagctgaaggagtgtcttgagaatcagcagaagctc
atgcacagtaaagggaattga
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