Caretta caretta (Loggerhead turtle): 125640217 Help Entry 125640217         CDS       T09292                                  Symbol VCL Name (RefSeq) vinculin isoform X1   KO K05700   vinculin Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay04510   Focal adhesion ccay04520   Adherens junction ccay04810   Regulation of actin cytoskeleton ccay04820   Cytoskeleton in muscle cells ccay05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:ccay00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125640217 (VCL)    04520 Adherens junction     125640217 (VCL)   09142 Cell motility    04820 Cytoskeleton in muscle cells     125640217 (VCL)    04810 Regulation of actin cytoskeleton     125640217 (VCL)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     125640217 (VCL)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:ccay04812]     125640217 (VCL)    04147 Exosome [BR:ccay04147]     125640217 (VCL) Cytoskeleton proteins [BR:ccay04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      125640217 (VCL) Exosome [BR:ccay04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    125640217 (VCL) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vinculin Talin_IBS2B VMAP-M0 DASH_Spc34 Motif Other DBs NCBI-GeneID:  125640217 NCBI-ProteinID:  XP_048714433 LinkDB All DBs Position 7:61021384..61128419 Genome browser AA seq 1068 aa AA seqDB search MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKSSKSQGIEEALKNRNFTVEKMSAE INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNASPGDPGEQAI RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADFRARGQGATPMAIQKAQQVSQG LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEQIRGIMAEARKIA ELCEDPKDRDDILRSLGEISALTAKLSDLRRHGKGDSPEARVLAKQVATSLQNLQSKTNR AVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMIGPYRQ DLLAKCDRVEQLAAQLADLAARGEGESPQARAIATQLQDSLKDLKTRMQEAMTQEVSDIF SDTTTPIKLLAVAATAPPDAPNRDEVFDERAANFENHAVRLGATAEKAAAVGTANKTTVE GIQAAVKSARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSEDPKF REAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE PDFPPPPPPDIEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPM MMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGVSGNKRALIQCAKDIAKAS DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQ ATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ NT seq 3207 nt NT seq  +upstreamnt  +downstreamnt atgcccgtcttccacacccgcaccatcgagagcatcctggagcccgtggcgcagcagatc tcccacctggtcatcatgcacgaggagggggaggtggacggcaaggccattccggacctg actgcccccgtggccgcagtgcaggccgccgtcagcaacctggtccgggttggaaaagaa acagtgcagacaaccgaagaccagattttgaaaagggacatgccaccagcctttatcaaa gtggagaatgcctgcactaaacttgtccaggcagcccagatgctgcaagcagatccttat tcagtacctgctcgtgattatctcattgatggatcaagaggcatcctctctggtacatca gacttgcttctgacgtttgatgaggctgaggtccgtaaaatcatccgtgtctgcaaagga attttggaatacctaactgtagcagaggtggtagagactatggaggacttggtgacatac acaaagaatctgggtccaggaatgacaaagatggctaaaatgattgatgaaagacagcag gaattgactcatcaggaacacagagtgatgttggtgaactccatgaacactgtgaaggag ctgttgccagtccttatttcagctatgaagatttttgtaacgactaaaagttccaaaagc caaggaatagaagaggccttgaaaaaccgcaatttcacagtagagaagatgagtgctgaa ataaatgagatcatccgggtgttacagctcacttcctgggatgaggatgcctgggctagc aagaaggacactgaagctatgaagagagctttggccttaatagattccaagatgaaccag gcaaagggctggctaagggatcccaatgcatcaccaggggatcctggtgagcaagctata aggcagatccttgatgaagccggaaaagtgggagaactgtgtgcaggcaaagaacgcaga gagattctgggaacctgtaaaatgctaggccagatgactgatcaagtggctgatttccga gctagaggacaaggtgctacaccaatggccattcagaaagcacagcaggtgtctcaaggt ctggatttgcttacagcgaaagtggaaaatgcagcccgcaaactggaggccatgaccaac tctaagcaggcgattgctaaaaaaattgatgctgctcagaactggctcgcagaccctaat gggggaagtgaaggggaagaacaaattcggggaattatggccgaagccaggaaaattgca gaactgtgtgaggaccccaaagacagagatgacattctgcgttccctgggagaaatctct gctctgacagctaaactgtcagatctacgaagacatgggaaaggagactctccagaggcc cgggtactggctaagcaagtagctacatcactgcagaatttacagtctaaaacgaacagg gcagtagcaaacaccaggccagttaaggcagctgttcatttggagggcaagattgagcaa gctcaaaggtggattgacaatccgacagttgatgaccgtggagtaggccaggctgcaatc cggggactggtcgctgaaggtcgtcgtttagccaatgtcatgataggaccttatcgtcaa gacctccttgccaaatgtgatcgcgtagaacagctggctgcccagctagctgatctggca gcaagaggagaaggagagtcacctcaggctagggcgattgccactcagctccaggattct ttgaaggatctgaaaacaaggatgcaagaagctatgacccaggaggtttctgatattttt agtgacactacaaccccaattaaactattggcagtggcagccactgcacctcctgatgca cccaatagggatgaggtgtttgatgaaagggcagcaaactttgaaaaccatgctgttaga cttggagcaacagcagaaaaagcagctgctgttggaactgctaataaaaccacagtggaa ggcattcaagcagctgtgaaatcagcaagagaactcacgccgcaggtaatatcagctgct cgtatcctcttaagaaaccctggaaatcaagctgcttatgaacattttgagaccatgaaa aaccaatggattgataatgtagaaaaaatgacagggttggtagatgaagcaattgatacc aagtctctcttggacgcatcagaagaagctattaagaaagacctagataaatgtaaagtt gcaatggccaatatccaacctcagatgcttgtagctggtgccaccagcattgctcggcga gcaaaccgaatcttgttggtggcaaagaaggaagttgaaaattcagaggatcccaaattc cgtgaagctgttaaggcagcctctgacgacctaagcaaaactatatcaccaatggtaatg gatgctaaagctgtggcaggaaacatttctgatcctggtttgcagaagagcttcctggat tctggatataggattctgggagctgtggcaaaagtcagagaagccttccagcctcaagaa cctgatttccctcctcctcccccccctgacattgagcagcttcatctgactgatgaactt gcacctccaaaaccaccccttccagagggtgaagttccaccacccagaccacctcctccc gaagagaaagatgaagagttcccagagcagaaagcgggagaggtgattaatcagcccatg atgatggctgctaggcagctacatgatgaagcccgaaaatggtctagcaagggtaatgat ataattgctgctgcgaagcgaatggctctgctgatggcagagatgtcccgcctagtgaga ggtgtcagtggaaacaagcgtgcccttattcagtgtgccaaggatatcgcaaaagcgtca gatgaagtgactcgattggctaaggaggtggcaaagcagtgcaccgacaagcgcattcga acaaacctcttgcaggtgtgtgagcgaatcccaaccatcagcacccaactcaaaatcctc tccactgttaaagctaccatgttgggcaggacaaacatcagtgatgaggagtcagaacag gctactgagatgttggttcacaatgcccagaaccttatgcaatctgtaaaggagactgtg agagaagcggaagcagcgtctattaagattagaacagatgctggattcactcttcgctgg gttagaaagactccttggtatcagtaa

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