Caretta caretta (Loggerhead turtle): 125640241
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Entry
125640241 CDS
T09292
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccay03021
]
125640241 (BTAF1)
Transcription machinery [BR:
ccay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125640241 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_EZ
UTP20
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
125640241
NCBI-ProteinID:
XP_048714519
LinkDB
All DBs
Position
7:complement(92978683..93075678)
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AA seq
1868 aa
AA seq
DB search
MDFSPQGSLWCVGLKRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLI
YLRSTNWDTRIAAGQAVEAIVKNVPEWKPTPRPKQESDSESPMDDSCASDRLRFDRFDIC
RLLKHGASLLGSAGAEFEVQDDKSGEVDPKERIARQRKLLQKKLGLDMGAAIGMNTEDLF
NDEDLDYTPTSASLVNKQPVGKTSGCLTARNNTTLQAAELIDSEFRAGMSSRQKNKAKRM
AKLFAKQRSRDAVETNEKSNDSTDGEPEEKRRKIANVVINQPATDSKVLVDNAPEEANEW
PLESFCEEVCNDLFNPSWEVRHGAGTALREILKAHGKSGGKMGDSTVEEMAQQHQEWLED
LVIRLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKHMNETGVHKTVDILLKLLTQD
QWEVRHGGLLGIKYALAIRQDTINTLLPKVLPAIIEGLQDLDDDVRAVAAASLVPVVESL
VHLQSQKVPFILNTLWDALLELDDLTASTNSIMILLSSLLTYPQVQKCSIQQSLTVLVPR
VWPFLHHTISSVRKAALETLFTLLSTQDQSSSAWLTPILQDMLRHIFQFCILESSQDILD
LIHKVWLELLNKASVQYVVAAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARSKEKAGGK
LRQGQTQNKEVIQEYIAGADSITEDLATRDYVVMRARVMAAKLLGALCCCICDPSVNTVP
QEIKPAESLAQLLLFHLNSKSALQRISVALVICEWAALQKECKAVALSVQPRLLGVLSEH
LYYDEIAVPFTRMQNECKQLISSLADAHIDIGNRVNYSVFTIDQANELVTTVFNEVTSAF
NLNPNILQQLDSKRQQVQMTVTETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPVIKPL
METVKKEENILVQNYAALCVAKLLQQCTSRSPCPNSKIIKNLCNSLCVDPHLTPLAACPA
QPQSSHENSKGPNSERDGMHHTVTKHRGIITLYRLQKAAFAITSRRGPTPKAPKAQIADL
PTGSSGNLTTELDEAQKPYIVQRRGAEFALSTIAKHFGAEMVIGLPHLWDAMVGPLRNNI
NLNSFDRKSLLEKGDVSAQELVNSLQVFETTAASMDIQLHPLLIKHLPHLYVCLQHPSTA
VRHMVARCVGVMSKIATMDTMNILLEKVIPWLGAIDDNTKQEGAIEALASVMEQLDVGIV
PYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKER
HFLEQLLDGKKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQS
ICILAGDHCLRAQEYARTKLVDSVPLPSLVVCPPTLTGHWVDEVSKFCSKEYLNPLHYTG
PPTERARLQHQVKKHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVK
QLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSRE
QEAGVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAK
CDVDETVSSASLSEETERPKLKATGHVFQALQYLRKLCNHPALVLTTQHPEYKRTTEQLA
AHNSSLRDIQHAPKLSALKQLLLDCGLGNGGSSESGTEAVVAQHRILIFCQLKSMLDIVE
HDLLKPHLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTV
VFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ
ENASLQSMGTDQLLDLFTLDKDGKSEKADTSSSGKASMKAVLENLGELWDPEQYDSEYSL
ENFMHSLK
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagtccccaaggcagcctctggtgtgtggggctgaagaggcttgatcgtctc
ttcattttactggacactggtaccacaccggtaacaagaaaagcagctgcacagcaactt
ggggaggtggtgaaactccatccccatgaactgaataatctcttatctaaagtgttaata
tacttaaggagtacaaattgggatactcgcatagcagctggccaggctgttgaagcaata
gtgaaaaatgtaccagagtggaagccaactccaagaccaaaacaagaatctgattcagaa
agtcctatggacgattcatgtgccagtgatagactgcgttttgataggtttgatatctgt
cgactattaaaacatggagcatctcttcttggatctgctggtgcagagtttgaggtccaa
gatgacaaatcaggtgaagttgatcctaaagagaggatagcacgacaaaggaaactgtta
caaaagaaacttggacttgatatgggagctgcaattggaatgaacactgaagacctgttc
aatgatgaggatttggactatactcctacttcagcttcacttgtaaacaaacaacctgta
ggtaaaacctcgggctgtttgactgcaaggaataatacaactcttcaggctgctgagttg
attgattcagaatttcgagctggtatgagcagtagacaaaagaataaagctaaaaggatg
gctaagctatttgcaaagcaaagatccagggatgcagtagagactaatgagaaaagcaat
gatagcactgatggggaaccagaagaaaagcgcagaaaaatagcaaatgttgtcatcaac
cagcctgccactgactcaaaagttttggtagacaatgcaccagaagaggcaaatgaatgg
cctttagaaagcttttgtgaagaagtatgcaatgatctttttaacccatcctgggaggtt
cggcatggtgcaggcactgcgctgagggaaatacttaaagcacacgggaaaagtggtggc
aaaatgggagacagtactgtagaagagatggctcagcagcatcaggaatggctggaagac
ttagttattagactcctttgtgtgtttgcattagacagattcggagactttgtttcagat
gaagttgtagcaccagtacgtgagacttgtgctcagactttgggagtagtattgaaacat
atgaatgagactggagttcataaaactgtggatattctcctgaagttgctcacacaagac
caatgggaagtgagacatggcggtctgctaggaataaagtatgcgttggcaattcgtcag
gatacgattaatactttattgcctaaagtcttgcctgcaataattgaaggtctccaagac
ctggatgacgatgtccgagctgttgctgcagcatctttagtaccggtagtggaaagcctt
gttcatcttcagtcacaaaaggtgccctttattcttaatacactgtgggatgctcttctg
gaattggatgatctgacggcttctacaaacagcatcatgatccttctttcctcccttcta
acttatcctcaggtccaaaaatgcagtattcagcaatcactcaccgttttggtcccacgt
gtatggccattcttgcatcatactatatcatctgttcgaaaagcagcgttggaaacttta
tttacgctcttatctacccaagaccagagttcttcagcctggctaactccgatcctgcaa
gatatgttgaggcacatttttcagttttgtattttagaaagcagccaagatattctggat
cttattcacaaggtgtggctggaactgttaaacaaagcatcagtacaatacgtggtagca
gcggcttgtccgtggatgggagcctggctctgcttaatgatgcagccttctcacttgcct
attgatttaaatatgttgctagaagtaaaagccagatcaaaggaaaaagcaggtggcaag
ctgcgtcaaggtcaaacccagaacaaagaagtgatacaggagtatattgctggtgcagac
agcattacagaagatctggcaaccagggattatgttgttatgcgagcccgggtgatggca
gcaaagttgttaggagcactttgctgctgtatttgtgatccaagtgtaaataccgttcct
caagaaataaaaccagctgaatcactagctcagctactgcttttccatttgaattcgaaa
tctgccttgcaaaggattagtgttgcgttagtaatttgtgagtgggctgccttgcaaaag
gaatgtaaagctgtagccctttctgtgcagccacgcttacttggagtcctttctgagcac
ctttattatgatgaaattgctgttccttttacacgaatgcagaatgaatgtaaacaactc
atttcatcactagctgatgcacacattgacattgggaacagagtaaactacagtgtattt
acaatagatcaagctaatgaactggttactactgttttcaatgaagttacatcagctttt
aatttaaatcctaatattttacaacaattggacagtaaacgacaacaagtccaaatgacg
gttacggaaacaaaccaggaatggcaagtgttacagctgcgagtccatacttttgctgca
tgtgctgttgtgagcttacaacaacttccagaaaaactaaatcctgtcataaaaccttta
atggaaactgtcaaaaaagaagagaacatactggtacaaaattatgcagctttgtgcgta
gctaagttacttcaacagtgtacatcaagatctccatgccccaactctaagatcataaaa
aatctctgcaactctctctgtgtggacccacatcttactcccttagcagcatgtcctgca
caacctcaaagcagccatgaaaactctaaaggacccaactctgagagagatgggatgcac
catactgtcaccaagcacagaggaataattactctgtatagacttcagaaagctgctttc
gccatcacaagtaggcgaggtcctacaccaaaggctccaaaagcccaaattgcagacctt
ccaacaggcagtagtggaaacctcaccacagaacttgatgaggctcagaagccatatatt
gtacagaggagaggagctgaatttgccttatctactatagctaaacatttcggtgctgaa
atggtaataggattgccacatctctgggatgctatggttggtccactaagaaataatatt
aacctaaacagttttgatcggaaatccttattggaaaagggagatgtgtctgctcaggag
ttggtcaattctctacaggtgtttgaaacaacagcagcgtcaatggacattcagcttcac
cctttgttgataaagcatttgcctcatctttatgtgtgccttcagcatccaagcactgca
gtgagacacatggttgctcgttgtgtaggtgttatgagcaaaatagctaccatggataca
atgaatattttgttagagaaggttattccatggctgggagcaatagatgacaataccaaa
caagagggtgcaattgaagcgcttgcttctgtaatggaacagctagatgttggtattgtt
ccatatattgtccttctagtggtcccagttttgggtcgaatgagtgatcagacggacagt
gtacgtttcatggctactcagtgctttgcaacactaattagactaatgccccttgaggct
ggcattccagatccaccaaacatgtctgaagaattaatccaactgaaagccaaagagcgc
cattttctggagcaactattggatggaaaaaaattggaaaactataaaattccggtccca
atcaaagcagaactcagaaaatatcagcaggatggtgtcaattggctggcatttctcaat
aagtacaaacttcatggaattctttgtgatgatatgggtttaggaaaaacattgcagtcc
atttgtattcttgcaggagatcattgcctcagggctcaagaatatgcaagaactaaattg
gtagacagtgttcctcttccatccttggtggtttgtcctccaacgcttacaggtcattgg
gtggatgaagtgagtaaattttgctccaaagagtatctcaatcctttgcactataccgga
cctcccactgaaagagcaagattgcaacaccaggtgaaaaagcacaatctcatagtagct
tcatatgatgttgtgcgaaatgacattgatttcttcagaaatattaagtttaattactgt
attcttgatgaaggccatgtaatcaaaaatggaaaaacaaaattgtcaaaagcagtaaag
cagttgactgccaattataggatcattctttctgggacaccaatccagaataacgtttta
gagttgtggtcactgtttgacttccttatgccaggatttttgggtactgaacgccagttt
gcagcacgttatggcaaaccaattttagcaagtagagatgctcggagttccagtcgagaa
caagaggcaggagttcttgcaatggaagcactgcaccgtcaagtattaccatttctgttg
agaagaatgaaagaggatgtactacaggatcttccacccaaaattattcaagattattac
tgtactctcagtcctctacaggttcagctttatgaagattttgccaagtctcgtgccaaa
tgtgatgttgatgaaactgtttcatctgcttcactgagtgaggagactgaaaggccaaag
cttaaagctacaggacatgtgtttcaggcattgcaatatttacgaaaactatgtaaccat
ccagcattagtgttaacaacccagcatccagaatacaagagaaccacagagcagcttgca
gctcataactcatcccttcgagatatccagcatgcacctaaactgtctgctttaaaacaa
ctactactagactgtggtttgggaaatggtggctcttcagagagtggcacagaagctgtt
gtggctcagcacaggatacttatcttctgtcagctcaagagcatgctggatatagtagaa
catgaccttctcaaacctcacttgccctctgttacatatttgcgattagatggcagcata
cctgctggtcaaaggcattccattgtttcacggtttaataatgacccatccatagatgtt
cttttgctcaccactcatgttggtggactgggacttaacttaacaggagctgacacagta
gtatttgtggaacatgactggaacccaatgagagatctgcaagcaatggatcgagcacat
cgtattggacagaaacgtgttgtcaatgtgtatcgcttgataacgagaggaactctggaa
gagaaaattatgggtctgcagaagttcaaaatgaatattgcaaatacagtgattagccaa
gagaatgcaagcctacaaagcatgggaacagatcagcttcttgacctattcactcttgac
aaggatgggaaaagtgaaaaagcagatacttcttcttctgggaaagcctctatgaaagca
gttcttgaaaatctgggagaactttgggatccagaacagtatgattctgaatacagtcta
gaaaactttatgcattcactcaagtaa
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integrated database retrieval system
