Caretta caretta (Loggerhead turtle): 125640255
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Entry
125640255 CDS
T09292
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125640255 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125640255 (MBD4)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125640255 (MBD4)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
125640255 (MBD4)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125640255 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
DUF8164
Motif
Other DBs
NCBI-GeneID:
125640255
NCBI-ProteinID:
XP_048714572
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All DBs
Position
7:complement(19056724..19065508)
Genome browser
AA seq
596 aa
AA seq
DB search
MHLRSAGRNDIPARDMGGASAMAAPEVRGQEGSDKSNMQIGKKTKKEGKELVTETREYFG
LQIEGTETIAENTLQCKEDAAAVSEVASRCLKNIPDGWEKITKQRQSGKTAGKYDVYFIS
PQGAKLRSKCALVAYFSKNGETVLKPEDFDFTAPVQSKTRSRAKGFGAEAVGLRLQNKEC
NSKAQDLSVQSSKEELKVVELQTSNEQLENISIHLQAREDLVIKDIKPKDCCIKVKEKGA
VGRRAQIKKARKGSEKRNSDHSQNKRQRKASCNKQEAEGSQIKKFQRKKDVCVSDRGRID
NQNLNPTDTGKANTLLKDEIMTSESQSEMHLGPVTALSETESRTMGELGCAEKSSDDVAA
MKSDKNIAERQGLSAFANKKDWVNSGNQDFKPGTETDISISQPCDKKSFTSVKMLQEDYI
PRTQVERRKTSPYFSSKYSKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATI
FLNKTSGKMAIPVLWEFLEKYPSPEVARTADWKEMSELLKPLGLYELRAKTIIKFSDEYL
TKQWRYPIELHGIGKYGNDSYRIFCVNEWKEVHPQDHKLNTYQAWLWENHEKMSLN
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcgcagtgcgggcaggaatgacatacctgcacgtgacatgggaggtgcttca
gctatggcggctccggaagtacgcgggcaagagggcagtgacaaaagtaacatgcaaatt
ggaaagaaaacaaaaaaagaggggaaagaattagtgacagagacaagagaatattttggt
ctacagattgaaggtactgagaccatagcagaaaacacactccagtgcaaagaagatgca
gctgctgtgtcagaagtggcttctagatgtctcaaaaacattccagatggatgggagaag
atcacaaagcaacgacagtcaggcaaaactgcagggaaatatgatgtttatttcatcagt
cctcaaggagcaaagttaagatccaaatgtgcacttgtggcatattttagtaaaaatgga
gaaactgttcttaaaccagaagattttgactttactgctcctgttcagagcaaaactcga
tcaagagccaaaggattcggtgcagaagctgtgggactaagattacagaataaagaatgt
aacagtaaagcacaagatcttagtgtgcaaagtagtaaagaagaacttaaagttgtggag
ctgcagaccagtaatgaacagctggaaaacatttccatccatctgcaggccagggaggac
ttggtcattaaagacattaagccaaaggactgttgcataaaggtcaaagaaaaaggagca
gttggaagaagggctcaaattaagaaagctagaaagggctcagaaaagaggaattcagat
cacagccaaaataaaaggcagagaaaagcatcatgtaataaacaagaggctgagggcagc
caaatcaaaaaattccagcgaaagaaagatgtttgtgtttctgatagaggcagaatagac
aatcaaaacttaaaccccacagatactggaaaagcaaacacactcttaaaggatgaaata
atgacttcagaatcacaatcagagatgcatcttggaccagtaactgctctctcagaaacg
gagtcaagaaccatgggagagttaggatgtgcagagaagagttctgatgatgtagctgct
atgaaatctgacaagaatattgcagaaagacaaggattgagtgcatttgcgaataagaag
gattgggtaaattcgggtaaccaggatttcaaacctggcactgaaacagacattagcatt
tcacagccttgtgacaagaaaagctttacatcagtgaaaatgctgcaagaagattatatc
ccaagaacacaagtagagagaaggaaaaccagtccatatttttctagtaaatacagtaaa
gaagctccaagcccaccaagaaggaaggccttcaggaaatggacccctcctcggtctcca
tttaatttggtccaggaaacgctctttcatgatccatggaagctcctcattgcaaccata
tttctcaataagacctcaggtaagatggcaatacctgtgctctgggagtttctggagaaa
tatccttcccctgaggtagcaagaactgcagactggaaagaaatgtcagagttgcttaaa
cctcttggcctctacgaactcagagcgaagaccattatcaaattttcagatgagtatctg
accaagcaatggaggtatcctattgagctgcatgggattggaaagtatggcaatgattcg
tacagaatcttctgtgtcaatgaatggaaggaggtacatccacaagatcacaagttaaat
acataccaagcatggctctgggaaaaccatgaaaaaatgagtcttaattga
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