Caretta caretta (Loggerhead turtle): 125640425
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Entry
125640425 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 4-like
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125640425
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125640425
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125640425
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125640425
Ubiquitin system [BR:
ccay04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125640425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Choline_bind_1
Choline_bind_3
Motif
Other DBs
NCBI-GeneID:
125640425
NCBI-ProteinID:
XP_048714886
LinkDB
All DBs
Position
7:51349909..51446250
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AA seq
1016 aa
AA seq
DB search
MFSASQAASSVRQPGPQGSWQVVEPSSRTGAAXGARGAPAAVGGREEGSAPAHVGLCGQA
GYPLQGQGAGCTDMAADLDGGPRPDVGAQRAELGPLLGIALRPGESWYLIDSRWFKQWKK
YVGFDSWDMYNVGEPNLFPGPIDNSGLFADPERQTLKEHLIDELDYVLVPTEAWNKLVNW
YGCVEGQQPIVRKVVEYGLFVKHCKVEVYLLELKLCENSDPTNVLTCHFSKADTIATIEK
EMRQLFNILSEKETRLWSRYMSNAYEQVSNLDSTVQDAGLYHGQVLLIEVKNEDGTWPRQ
SLPAKSSTATSRNFTTSASSVNSYSSMSVSSAIANGDSNNSYELTSSSLGRGVSGFSYNS
YSCRESTSQSQPGICGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDKYEAEINHDNPLGM
RGEIAEAYAELIKQMWSGRHSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE
DLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKV
SVTFDPFCYLTLPLPLKKDRSMDVVLVFAGLHHRPTQYRVVVPMMGAVSDLCEALSKLSK
IPAENMVVTDVYNHRFHKIFQMDEGLSHIMPKDNIFVYEVCKSSDGAECITLSVYFREKR
IRQSSTSSGTVLCGQPLLISVPKHKLTLDHLYKVVLEQIGHYIKFPLTKEYSSVCLDSGI
CNGSSGGCEVEEMEHQDGDEEGREKASETDSCQSEGCAHDLLGKEGQHHKKHLFTFSLVN
SYGTSEINSITTEGKLLKLNSYATLAIDLDPDTRKLLFDEQESQAFEKDASMLQSQKKKT
TVALKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYW
RDKLDTVVEFPIRDLSMSEFVCDPTADPYVYDLIAVSNHYGAMGVGHYTAYAKNKVNGKW
YYFDDSSVSMASEDQIVTKAAYVLFYQRRDSKKHVAPSLPAESKLALEECDGMDTN
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgccagccaagccgcaagctctgtcaggcagccgggcccgcagggttcctgg
caggtcgtggaaccctcctcccgcactggggctgcannaggggcgcgtggggccccggcg
gcagtcgggggcagggaggaaggcagtgcgcctgcgcacgttggcctgtgcggccaggcc
ggatatccgctgcagggccagggcgccgggtgcacggacatggcggcggacttagatggt
ggcccgaggccggacgtcggggcccagcgggcagagctggggccgctgctggggatagct
ctgaggccgggcgagtcctggtatttgattgacagtcggtggttcaaacagtggaagaag
tatgtgggttttgacagctgggacatgtacaacgtgggtgagcctaacctgtttcctgga
cccatcgataactctggactctttgcagatccagaaagacagaccttaaaagaacacctc
attgatgagctggattatgtgttggttcccactgaagcctggaataagctagtgaactgg
tatggctgtgtagaggggcagcaacctatagtaagaaaagtggtggagtacggtctgttt
gtgaagcactgtaaagtagaagtttatctcctcgaactgaagctgtgtgaaaatagtgat
cctaccaatgtgttgacctgccatttcagcaaagcagacaccatcgctaccattgagaag
gaaatgcgacagctgtttaatatcctcagtgaaaaggaaactaggttatggagcaggtac
atgagtaacgcctatgagcaggtcagcaacctggacagcactgtacaagatgcagggctc
tatcacggtcaggtgctgttaatagaagtgaagaatgaagatggtacatggcccaggcag
tctcttcctgcaaaatcaagcactgcaactagcagaaattttactacttcagcatcatca
gtaaattcttattcctcaatgtctgtctcttctgccattgcaaatggtgatagcaataac
tcctatgaactgacgagctccagccttggcaggggagtctctggcttctcctacaactcc
tacagctgcagggagtccacttcccagtcacagcccggcatctgtgggctcagtaacctg
ggaaacacctgcttcatgaactctgcgttacagtgtttgagtaacaccccacctctgact
gagtatttcctggaagataaatatgaggctgaaataaatcatgacaatcctctggggatg
agaggagaaattgcagaagcatatgcagagcttattaagcagatgtggtctgggagacac
tctcacgtggcgccacgtatgttcaaaacccaggttggccgttttgcccctcagttctca
gggtaccagcagcaagattctcaggagctcttggcattcctcctggatggcttgcatgag
gatctgaaccgagtgaagaagaagccctacttggagctcaaggatgccaatggcaggcct
gattcggtggtggcgaaagaagcctgggagaaccataggttaagaaatgactctattatt
gtggatattttccatggccttttcaaatccaccctggtctgtccaaaatgctctaaagtt
tctgtgacttttgaccctttctgctatttaactcttccactgcccttgaagaaagatcgt
tccatggacgttgttttggtttttgcaggcctgcatcatagacctacccagtatcgggta
gttgtgccaatgatgggggctgtatcagacctgtgtgaagctctttccaaactctccaag
atccctgcagaaaatatggtggtgacagatgtttataatcaccgattccacaaaattttc
caaatggatgaagggttaagtcacatcatgccaaaagacaacatctttgtatatgaagtt
tgcaagtcaagcgatggtgctgagtgcatcactctttctgtatacttcagagaaaaaaga
ataagacagtccagcacttcttcagggactgttctttgtgggcagccactactaatctct
gtgcccaaacacaagctcactctggatcacttgtacaaggttgtcttggagcagattggc
cactacattaaattccctctgacaaaagaatattctagtgtatgcctggacagtgggatc
tgcaatggctccagtggtggctgcgaagttgaagagatggaacatcaggatggagatgag
gagggcagggaaaaagcctcagaaacagattcctgccagtcagagggttgtgcacatgat
ttgctggggaaggaagggcagcatcacaagaagcatctgttcacctttagccttgtgaac
tcctatgggacctctgagataaactcaattacgacagaggggaaacttctaaaactgaat
tcctatgccacccttgctattgacttggatccagacacccggaagctgctgtttgatgaa
caagagtcacaggcatttgaaaaggatgcaagtatgttgcagtcacagaagaagaaaact
actgtagctcttaaagactgtatagaactctttactacaatggaaacgcttggtgaacat
gacccttggtactgccctaactgcaagaagcatcagcaggccacaaagaagtttgatcta
tggtctttgcccaggattttggtggtgcatttaaaacgtttctcatacaacagatactgg
agggataaacttgacactgtggttgaattccccatcagggatttgagtatgtctgagttt
gtctgtgacccaacagctgatccgtatgtgtatgacctcattgcagtgtccaatcactat
ggagccatgggagtaggccactatactgcatatgcaaagaacaaagtgaatggcaaatgg
tactactttgatgacagcagtgtatcaatggcttctgaagatcaaatagtgacgaaagct
gcatatgtgctattctatcagcggcgggacagcaagaagcacgtagccccatctcttcct
gcagaaagtaagctggcattggaagagtgtgatggcatggataccaactga
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