Caretta caretta (Loggerhead turtle): 125640462
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Entry
125640462 CDS
T09292
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04810
Regulation of actin cytoskeleton
ccay05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125640462 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125640462 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125640462 (CYFIP1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125640462 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
125640462 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
BP28CT
LRIF1
Motif
Other DBs
NCBI-GeneID:
125640462
NCBI-ProteinID:
XP_048714940
LinkDB
All DBs
Position
1:complement(122092805..122225052)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSNMNEMLEDGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVKRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVISGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKIMAGS
LLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSM
ELAIGRFESEDLTSIVELDGLVEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLTYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRTFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNNEIITILDKYMKSGDGEGTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaggttactttagaggatgccttgtccaatgtggatctcttggaagaatta
ccattgccggatcaacaaccatgtattgaaccccctccgtcatctctgctttaccagcca
aacttcaatactaattttgaagacaggaatgcatttgtcacaggcattgcaagatacatt
gagcaagctactgttcattcgaatatgaatgaaatgttggaagacggtcaagagtatgca
gtcatgctgtacacatggagaagctgctcaagagccattcctcaggttaaatgtaatgaa
cagcctaaccgagtagaaatttatgaaaaaacggtggaagttctggagccggaggtcaca
aaactgatgaattttatgtactttcagagaaatgcaattgaacgattctgtggggaggtg
aaacgcttatgccatgcagagaggaggaaggattttgtgtcggaagcatatctgatcact
ttgggcaagttcatcaacatgtttgcagtattagatgagctgaaaaatatgaagtgtagt
gtgaagaatgaccactctgcctacaagcgagctgctcaatttctgcgtaaaatggctgat
cctcagtccatccaggaatcccagaacctctccatgttccttgctaatcacaacaagatt
acacaatctttacagcaacagcttgaggtgatttctggctatgaagaactgctggctgat
attgtgaatttgtgcgtggactactatgaaaataaaatgtatctaacacccagtgagaaa
cacatgctcttaaaagtaatgggctttggattgtacctgatggatggaagtgtcagtaat
atctataaattggatgcaaaaaaaagaataaacttgaccaagatagacaagttctttaag
cagctgcaagtggtcccgctgtttggtgatatgcagattgaactggcaagatacattaag
actagtgcccactacgaggaaaacaaatccagatggacatgcacctcttccagcagcagt
ccccagtacaacatatgtgagcagatgatccagatcagagaagaccatatgcgcttcatt
tcagaattggctcgttacagcaacagtgaggtagtgactgggtctggccgtcaggaagct
cagaaaacagatgcggagtatcgaaaactctttgatctctctctccagggactacagctc
ctatctcagtggagtgcacatgttatggaagtgtattcatggaaactagtgcatccaact
gacaaatactccaataaagattgccctgacaatgcagaagaatatgaaagagcaacacga
tacaattataccagtgaagagaagtttgctttggttgaggttattgccatgatcaaaggt
cttcaggtgctgatggggaggatggaaagtgtctttaaccatgccatacgtcataccatt
tatgctgctcttcaggacttctcccaggttacactgagagaaccattaaggcaggccata
aaaaagaagaaaaatgtaattcagagtgttcttcaggccatcagaaagaccgtttgtgat
tgggaagcaggacatgaaccatttaatgacccagcactaagaggagagaaagaccccaaa
agtggttttgacatcaaagttcctaggcgagcagtgggtccctccagtacccagctttac
atggtgagaactatgttagagtctctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaatttcatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctgcagcagtgctgtgacctgtcccag
ttgtggttcagagaattcttcttagaactcaccatgggtagaagaatccagttccccatt
gagatgtctatgccttggattttgactgaccatattctggagacgaaagaggcatcaatg
atggagtatgttctctattctttggatctttacaatgacagcgctcattatgcgcttact
aaatttaagaagcagttcctctacgatgaaattgaggcagaggtaaacttgtgttttgac
caattcgtctacaagttggcagaccagatatttgcatactacaagattatggcgggaagt
ttgcttctggataaacggttacgctccgaatgcaagaatcagggggcaacaattcactta
ccaccttccaaccgctatgagacactgctgaaacagagacatgtccagcttcttggtagg
tcaatagatctgaaccgcctaatcactcagcggatttccgcagccatgtataagtcaatg
gaactggcaattggtcgatttgaaagtgaagacttgacttccattgttgagctcgatggc
ttggtagagataaataaaatgacacacaagctactgagcagatacatgaccttggacagc
tttgatgccatgttcagagaagccaatcacaatgtgtcggctccctatggaagaatcact
cttcatgtcttctgggagctcaactatgatttccttccaaactattgctacaatgggtcc
actaacagatttgttcgtactgtgttacccttttctcaggagtttcagagagataagcaa
cctaatgcacagccccaatatctccatggatcgaaggctttgaatttgacatattccagc
atttacagcaactacaggaactttgttggtccccctcactttaaagtcatttgcaggctc
cttgggtaccagggcatcgctgtggtaatggaggaattactgaaggtggtcaaaagcctg
ctgcagggcacaattcttcagtatgtgaagaccttgatggaagtgatgcctaaaatctgt
agattacctagacatgaatatggctctccaggtatcctggaatttttccaccatcagctg
aaggacattgtcgaatatgcagaactgaagactgtgtgtttccagaatttgcgggaagtg
ggaaatgctgtgctcttctgtctactcatcgaacagagtctgtcgctagaggaagtttgt
gacctgttgcatgctgcaccgttccagaatatactaccaagggttcatgtcaaagagggt
gaaagacttgatgctaaaatgaaaagactagaatcaaaatatgctccactccatcttgtt
cctctgattgaacgattaggaacaccccagcaaattgcaatagcaagggaaggagatttg
ctgaccaaggaacgcctctgctgcggcctatccatgtttgaggtcatcttgaccaggatt
cggaccttcctggatgacccaatctggcgtggcccccttcccagcaatggtgtgatgcat
gtggatgaatgtgtggaatttcaccgtctctggagtgcgatgcagtttgtatactgcatt
cctgtgggaacacacgagtttactgtggaacagtgcttcggagatgggctgcactgggct
ggctgtatgatcattgtgcttttgggacagcagcgtcgctttgatgttttggatttctgc
taccatttactgaaagtacaaaagcatgatggcaaagatgaggtcatcaagaatgtgcct
ttgaagaaaatggttgagagaattcgcaaattccagatcctgaacaatgagataattact
attttggacaaatatatgaagtctggtgatggagaaggtacacccgtggaacatgtgcgc
tgcttccagccccctatccatcagtctctggctagcaactaa
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