Caretta caretta (Loggerhead turtle): 125640497 Help Entry 125640497         CDS       T09292                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism ccay  Caretta caretta (Loggerhead turtle) Pathway ccay04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:ccay00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     125640497 (COL17A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen LapA_dom Motif Other DBs NCBI-GeneID:  125640497 NCBI-ProteinID:  XP_048714993 LinkDB All DBs Position 7:117003136..117059657 Genome browser AA seq 1536 aa AA seqDB search MDSVTKKTKRDGAEVTERLITESVTTRLTSLPPKGGSSTGHKTAHGGGSGMEKRTFTHGS SYVTSSGSGRMNSSSSSSGYRQSPSPCSTLPKSPGSTFERKTYVTRNATYEGSSSANSSP EFPRKEFASSNTRGRSQSRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRSS SSTLPIPKKAVVETKMVTESSQSVSGTYDTTILNAALPPYMWSSTLPAGSSLGSYHNNMA QGSSLVNTMSHSTGSVFGIPNNLASGSPTLNTGLSSSSTVFGVQNNLTPSSTAMTHSAIA ASTVYGVKKNTSQSAGMAGSGVCASTVGSNVNSQSDDILRKDCKFLLLEKENVPAKKEME LLIMTKDSGKVFSASSTGLSGASFAEDTLKREKQGFSSSYAADSYLKSETNGGLKSVSTK DKATYAEIRGDDGVGGIGAAPAWCPCASCCSWWKWLLGLLLAGLLLLGLLFGLIALAEEV KKLKSRVENLEKTQASYLLINPHNADINQQYSISDVGKGPDYATGFSHKDQEALWLFMRS KMALERGRGFFRGEKGEPGLKGDMGMQGPKGDQGLPGAPGMPGLMGHPGPEGPKGQKGSV GDHGMEGPMGQRGREGPPGPRGEPGPPGFGEKGDRGAVGDHGPAGPPGPPGSVGLKGMTG SPGPHGPPGSPGLQGFRGEAGLPGAKGEKGALGAPGPKGDHGEKGPRGLTGEPGSRGLPG PPGEPGAKGSIGPAGPDGHQGPRGEQGLMGMQGLRGPPGPAGDAGQPGLTGPQGPPGLPG NPGRPGAKGEPGAPGQVITAEGSSTIALPGPPGPPGAVGPPGPPGVPGPVGPAGLPGLQG PRGERGLTGETVVETIKSEVATSLSQISSDLLGRAGPPGPPGPPGASIQGPPGPRGPAGL PGPPGPPGRPGSFVPTSETFFAGPPGPPGPKGDQGSPGPRGFTGEPGQPGLPGISSSGAG VAIQGPPGPAGPRGPTGPKGDKGDAGVPGAPGIPGGSSAGGSSNSRHRQGPPGPPGPRGP PGPAGGSLQEIQQYIAEYLQSDTIGRYLIGPQGPPGPPGPPGIITTVDGQSLDYAELAKR VMSSMTSSGYNFEMSSSSSSSSRFLTYEDILAMLQREEVRRYLIGPQGPPGPPGPGGDGL SLSLSYDELTSRVISYITNNGLSLGLPGPPGPPGLPGTSYSDLIALLQGSEFSGIVGPPG PQGPPGVPGAPGIPGMPGSSLSTFSLEDVTSYLQSVGYASVSGPPGPPGPPGPPGPPGLS GTGHFSYTDNVLSDTFRSELIQYLTSDDVQRFISGPPGPPGPMGPPGPKGDSGIMAGSYG GSLGAGGSYGGSLGAGGSYGGAVGSDGSYGGAVGSDGSYGGAVGSDGSYGGALGSDGSYG GSMGAGGSYGGSLGAERAQRRSMSSSGSYSESFTGSLDYNELALRVSESIQSRGLLRDMV TYAAQGPPGPPGPPGISKVFANYGNVTEDLMDFFRTYGTIPGPPGHRGEMGYPGPKGEAG PMGPPGPQGPRGPKGEKGEKGEQVFVGRRKRRSVGV NT seq 4611 nt NT seq  +upstreamnt  +downstreamnt atggactcagtaacgaagaaaaccaaacgggatggagcagaagtcactgaaagacttatt acagagtcagtaaccacaagactgacgtccttaccaccaaaaggagggagcagcactgga cacaaaacagcccatggcggagggagtggaatggagaagaggactttcacccacggcagc agctatgtgacttcgagtggaagtggtagaatgaattcctcctcctcctcctccggctac agacaaagcccatctccctgctctactctccccaaatcacctggctcaacctttgaaaga aaaacctacgtcacccgcaatgcaacatatgaagggagctccagcgcaaattcttctcct gaattccctagaaaagagttcgcatcgtccaataccagagggcggagtcaaagccgagag agcgaaatccgagtacgactccagagtgcttctccctcgaccagatggacggaactggat gatgtgaagcgtttgctgaaggggagtcgatcggccagcgtcagccccacacgatcgtca tccagcactctccccatccccaagaaagctgtagtggaaacaaagatggtgactgagagc tcccagtcagtgtcggggacatatgatacaaccatactgaatgctgctctccctccatac atgtggtcctccaccctgcctgcagggtcttcccttggcagttaccacaacaacatggcc cagggctcttccctggtcaacaccatgtcccattcaacaggatcagtgtttggcatccca aataacctggcttctggctctcccactctgaacacagggctgagcagttcctcaacagtg tttggtgttcaaaacaacctgactccaagctctacagccatgactcatagtgcgatcgca gcctccactgtatacggagtgaagaaaaacacttcccagagcgctggaatggctggtagc ggagtgtgcgcttcaactgttggcagcaatgtgaactcccagagcgacgacatcctgcgt aaagactgcaagttcctgctgctggagaaggagaatgtccctgccaagaaggagatggag ctcttgatcatgacgaaggacagcggcaaggtcttcagtgcttccagcacggggctcagt ggagcgtcctttgcagaagacaccttgaagagagaaaagcagggcttctcttcctcttac gctgcagactcctacctgaaatctgaaacaaatggaggtctaaaatccgtgtcaacaaag gacaaagcaacttatgcagaaattcgaggcgatgatggagtgggagggataggggcagcc ccagcttggtgtccctgtgcttcctgctgtagctggtggaaatggctcctgggtttgctc ctggctgggctgctcctcctcggattgctcttcggactcatcgctttggcggaagaagtg aagaagctgaaatctcgtgtggaaaacctggagaaaacccaagccagctacctgttaatt aatccacacaatgcggatattaaccaacagtacagtatttctgatgtagggaaaggtcca gactatgctacaggtttcagtcataaagatcaagaggctctctggctgtttatgaggagc aaaatggctttggaaagaggacgaggtttcttccgaggagagaaaggggaacctggtctg aaaggcgatatgggaatgcaaggtcccaaaggagatcaaggacttcctggtgcaccaggc atgcctggtttgatggggcacccaggaccagagggaccgaaaggacagaaaggcagtgtg ggtgatcatggcatggagggacccatgggccaaagagggcgagaagggccaccagggcct cgtggggaacctggaccacctggatttggggagaaaggagacagaggcgctgttggtgat cacggacctgcaggaccgcctgggccaccagggtctgttggcctcaaaggcatgacgggt tctcctggcccacacggtccgcctggttctcctggtcttcaaggatttagaggagaagca ggtctcccaggggccaaaggtgagaaaggagctttgggagcacctggacccaaaggtgac catggagagaaaggacctcgtggtctgacaggtgagccaggctcaagaggattgcctggt cctccaggggaaccgggagccaaaggatccattggtccagctggccccgatggacaccaa ggcccacgaggggaacaaggtctcatgggaatgcaaggattgcgaggaccacctggaccc gctggcgatgcaggacagccaggtctcacaggaccgcagggacccccaggactcccaggc aaccccggtcgaccaggggctaaaggtgaacctggtgctcccggccaagttataactgct gagggttcatcaactattgctctccctggccctccaggcccaccaggagcagtaggacca ccaggaccacccggtgtcccaggtcctgttgggccagctggtctccccggactgcaaggt ccacgtggcgagagagggctcaccggtgaaaccgttgtggaaaccatcaaatcagaagtt gcaacttcattatctcaaatttcgtcagatttactgggacgagcaggcccccctggccct ccaggacccccaggcgcgtccatccagggaccacctggacctcgcggtccagcaggatta ccaggcccgccaggcccaccaggaagaccaggctccttcgtgcccacctcagaaacattc ttcgcaggtccaccaggcccacctgggccaaagggagaccaaggttcaccgggcccacgc ggattcacaggtgaaccaggtcagcccggcctcccaggaatctcttcttcaggtgctgga gttgccatccagggacctcccggacccgcagggcctcgaggacccaccggacccaaagga gacaaaggtgatgcaggcgtgccaggggctcccggcatcccaggagggtcttcagcaggc gggtcttcaaactcaagacacaggcagggtccaccaggtcctcccggcccacgcggtccc ccaggcccagctggaggctcactgcaggagattcagcagtacattgcggagtacttgcag agtgacactatcgggcgttacctgattggacctcaaggcccaccaggaccccccgggcca ccaggaatcatcaccaccgttgatggacagtccttggactacgccgagctggccaagcgt gttatgagctccatgacgagctccggttacaattttgagatgtcaagctcttcatcatcc tcatcaagattcttgacttacgaagacatcctggctatgctgcagagagaagaagttcgt cggtatctaattggacctcaggggcccccaggcccgcctggacccggaggagatggcttg tctctgtcactgagctatgatgagttgaccagccgggttataagctacataacaaataat ggactcagtcttgggctcccggggcccccaggtcctccaggattacccggcacatcttat agtgacctaatagctttactccaaggctctgaatttagtggcattgttgggcccccaggg ccacagggaccccccggagttccaggagccccaggaatccccggaatgccaggcagctct ctctccacattcagcctagaggatgtcacctcttacctgcaaagtgtgggatatgcttcc gtctctggaccaccaggacccccaggacctccagggccaccagggccaccaggtctatca ggaactggccacttctcctacactgacaacgtgctgagcgacacatttaggagcgagctg atccaatatctaaccagtgatgatgttcaaaggttcatctcagggcctcccgggcctcca gggcctatgggcccaccagggccaaaaggagatagcggcatcatggctgggtcatatggt ggatccctgggcgcaggcggatcatatggtggatccctgggtgcaggaggatcgtacggt ggcgccgtgggcagcgatgggtcatacggtggcgccgtgggcagcgatgggtcatacggt ggcgccgtgggcagcgatgggtcatacggtggcgccctgggcagcgatgggtcgtacggt ggctcgatgggtgcaggcggatcgtacggtggatctctgggagcagagagagcacagagg agatcgatgagttcgagcggatcctacagcgagtcattcaccggatcgctggattacaac gagctggcacttcgggtgtcggagagcatacagagccgaggcctcctccgggacatggtc acttacgccgcacaaggtccaccaggacccccggggccacctgggatcagcaaggtgttt gcaaattatggcaacgtcaccgaggacctcatggacttcttcagaacatatggtaccatc ccagggccacctggtcacaggggggagatgggctacccagggcccaaaggtgaggctgga ccaatggggcctccaggaccccaaggacccaggggcccgaagggggagaaaggagagaaa ggtgaacaagtatttgttggcagaagaaaaagaagaagcgtcggggtctaa

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