Caretta caretta (Loggerhead turtle): 125640542
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Entry
125640542 CDS
T09292
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccay03009
]
125640542
03036 Chromosome and associated proteins [BR:
ccay03036
]
125640542
Enzymes [BR:
ccay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125640542
Ribosome biogenesis [BR:
ccay03009
]
Eukaryotic type
Pre-60S particles
Helicases
125640542
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125640542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
125640542
NCBI-ProteinID:
XP_048715115
LinkDB
All DBs
Position
7:80169156..80191830
Genome browser
AA seq
816 aa
AA seq
DB search
MGAACRRLLCGAGRPGAGAAGLPPLPAPLVRGPGSARPPLGPRAGLRLLQPGAAPFSLGR
RWGWARAPAFIPSPHFLCDGPGAGLVPFTAAADQRSGSLPELRGEQPEEMPAAALLAADS
EPETPREGEAARAGRRRKHKDKKEKKSKRRDKSKELKSQTEENKLSEDDLEPPKPKKRKK
VKVNQEIEENSPEDKVKSLSMNNGIVHSKAQCNSSEASSAEYDSDQEPVKQLTEEEKEGA
FSNFSISKETAELLKARGVKYLFSVQAKTFQPIYDGKDVIAQARTGTGKTFSFAVPLIEK
LQGDTLERKRGRIPKVLVLAPTRELAIQVARDFKDVTKKLTVACFYGGTPYNGQIEHIKN
GIDILVGTPGRIKDHLQNGKLDVSNVKHVVLDEVDQMLDMGFAEQVEEILAFAYKKVMCC
FKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQFDLIGKKTQKTAMTVEHLAIECHWS
QRAAVIGDVIQVYSGSHGRTIIFCETKKDASELALNASIKQDAQSLHGDIPQKQREITLK
GFRNGTFEVLVATNVAARGLDIPEVDLVIQSSPPKDVDSYIHRSGRTGRAGRTGICICFY
QRKEEDQLRHVEQKAGITFKRVGVPTATDIIKASSKDAIRFLDSVPPSAIDYFKQSAQRL
IEEKGAVEALAAALAHISGATSIEQRSLLNSDVGYVTMTLQCSVEMHSIGYAWRGLKEQL
GDEIDNKITRMRFLKGKMGVCFDVPTAEQSHIQEQWQDSRRWQLSMATELPELEETPREA
GRGFSNFRNGRQGGGGFNKNNRFKNGGQKRNFHRAF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagcgtgccgcaggctgctgtgcggagccgggcggccgggcgcaggggctgcg
gggctgcccccccttcccgccccgctcgtgcgaggacccggctcggcgcgccccccgctc
ggcccccgcgcggggctccggctgctccagcccggcgcagcccccttctccctcggccgg
cgctggggttgggcccgggccccggccttcatcccctcgcctcacttcctgtgcgacggc
cccggggcggggctcgttcctttcaccgcggccgccgaccagcgcagcggctccctgccc
gagctccgcggggaacagccggaggaaatgcccgcagccgccctccttgcagccgacagc
gagcccgagaccccccgggaaggcgaggctgcccgggcgggccggaggaggaagcacaag
gataaaaaggagaagaaatctaaacgccgcgataaatccaaggagctgaaatcccaaaca
gaggaaaataagctatctgaagatgaccttgagcctcctaaacccaaaaagaggaaaaaa
gttaaagtgaatcaagagattgaagaaaacagcccagaggacaaggtgaaatccttgtcc
atgaacaatggcattgtccactcaaaagctcagtgtaattccagtgaagcatcaagtgca
gaatatgacagtgaccaagagccagtaaagcagttgacagaagaggagaaagaaggtgcc
ttctctaatttctctatttccaaagaaacagctgagcttcttaaagctcgaggagtaaag
tacctgttttctgtgcaagcgaagacctttcagcccatatatgatggcaaagatgtgata
gctcaggctcgaactggaactgggaaaacgttttcttttgctgttcctttgattgaaaaa
cttcagggagacacactggagaggaagagaggccgcataccaaaggtgctagttcttgct
ccaacgagagagctggcaatccaggtagccagagactttaaggatgtcacaaagaaactc
acagtggcttgtttttatggaggaactccatataatggacaaattgaacatattaaaaac
ggcattgacatcttagttgggactccaggacgaattaaagaccaccttcagaatggcaag
ctggacgtttccaatgtgaagcatgttgttttggatgaagttgatcagatgttggacatg
ggctttgctgaacaagtggaggaaattctagcatttgcttacaaaaaagtgatgtgttgt
ttcaaagattctgaagacaacccccaaacactgctgttttctgcaacttgtccacactgg
gtgtatgatgtagctaaaaaatacatgaaatctagatatgaacagtttgaccttattgga
aagaagactcaaaagacggctatgactgtagagcatttggctatagagtgtcactggtct
cagagagcagcagttattggggatgtcattcaggtttacagtggcagtcatggacggacc
atcatattttgtgagactaaaaaggatgcaagtgaactggccctgaatgcttctattaaa
caggatgcccagtcattgcatggtgacattccacagaaacagagagagatcacattaaag
ggtttcagaaatggaacatttgaagttctggttgcaaccaatgtagctgcccgtggttta
gatatccctgaagttgacctggtcatacagagttcacccccaaaggatgtggattcatat
atccatcggtctggacgcacaggaagagctggacggactggaatttgtatctgtttttat
cagcgaaaggaagaagatcaattaagacacgtagaacaaaaagcgggcattacatttaag
cgtgtgggtgtgcctacagccacagatataattaaagcttctagtaaagatgctatcagg
tttttggattccgttcctccttctgccatcgactatttcaaacagtcagctcagcggctg
atagaggaaaagggggcagtggaagctctggctgcagcattagcccatatttctggggct
acttccattgaacagcgttccttgctcaactcagatgtgggctatgtgacgatgacgtta
caatgttcggtagagatgcacagcattggctatgcctggcgaggactaaaagaacagctt
ggtgatgaaatagacaataaaattaccagaatgcgttttctcaagggaaagatgggtgtg
tgcttcgatgtccctacagctgagcaaagtcatatacaggagcaatggcaagattcaaga
cgctggcagctgtccatggcaacggagttacctgagctagaagaaactccgcgtgaagca
ggccgaggtttctctaacttcaggaatgggaggcaaggaggcggtggctttaacaaaaat
aacagattcaaaaacggaggtcagaaacgaaattttcacagagcattttag
DBGET
integrated database retrieval system
