Caretta caretta (Loggerhead turtle): 125640587
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Entry
125640587 CDS
T09292
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04120
Ubiquitin mediated proteolysis
ccay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125640587 (SYVN1)
04120 Ubiquitin mediated proteolysis
125640587 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125640587 (SYVN1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125640587 (SYVN1)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125640587 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125640587
NCBI-ProteinID:
XP_048715276
LinkDB
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Position
7:32116324..32143880
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AA seq
630 aa
AA seq
DB search
MFRTAIMMAASLALTSVVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIISLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKRAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEQAQQQQQQPP
PHHTPLIPQPPNFPQGILPPFPPGMFPLWPPIGPFPPVPGVQPPNNAENPSAASSAPSAS
GIQTTASTSRPVGDSASGSDTAPVGTVPGFPFPPPWMGMALPPLFGFPPMPVPPAGFAGL
TDEELRAMEGHDRQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGSPRPTQLPSSLN
TSSSSQETPTRESTTFNSPDSTSSPGTSPAVEPDSTGQTDDPSGLVGAEGYTEPAGHEEE
EERPLPGEPDTAELRRRRLQKLESSSPPSH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacggcaatcatgatggctgccagcctggctctgacatcggtggtagtggct
cacgcctattacctgaagcaccagttctacccaacagtggtgtatctgaccaaatccagc
cccagcatggcagttctctacattcaggcttttgttttggttttcctcctgggcaaattc
atgggcaaagtgttttttggccagctccgagcagcagaaatggagcacctacttgagagg
tcatggtatgcagtcacggaaacttgcctggccttcactgtcttcagagatgacttcagt
ccccgatttgtggccctcttcacccttctcttgttcctcaagtgcttccactggctcgct
gaggaccgggtggactttatggagaggagtccaaacatctcctggctctttcatttccgc
ataatctctctgatgcttttgttgggcatcctggatttcctatttgtcagccatgcctac
cacagcatcctcacccggggagcctctgtccagctggtctttgggtttgagtatgccatc
ctcatgaccatggtgctcacaatcttcataaagtacattctgcattcagtcgacctgcag
agtgagaatccatgggacaacaaggccgtctacatgctgtacacggagctcttcacaggc
ttcattaaagtgttgctgtacatggccttcatgaccatcatgatcaaagtgcacactttc
cctctctttgctatccggcccatgtacctggcaatgaggcagttcaagagagctgtgact
gatgccatcatgtcacgccgcgccattcgcaacatgaacactctataccctgatgccact
ccagaagagcttcaagcaatggataatgtttgtattatctgccgggaggagatggtgatg
ggcgctaaacgcctgccatgcaaccacatattccacaccagctgcctgcgttcatggttc
cagcggcagcagacctgccccacctgccgcatggacgtcctccgtgcctctctccccact
cagtcccagacgccacccgagcaacaggagcaagcgcagcagcagcaacagcagccaccg
ccgcaccatactccactgatcccccagccaccgaacttcccccaaggaatcctgcccccg
tttcctcctgggatgttccccctctggcctcccataggtccatttcctccagtgcctggt
gtccagccacccaacaatgcagagaatccctctgcagcttccagtgcaccctccgcttca
ggcattcagacaacagcgagtacctcgagacctgttggtgattcagcatctggatcggac
actgcccctgtgggaacagtgcctggctttcccttccctcccccgtggatgggaatggca
ttgccacctctatttggcttccctcctatgcctgtgccacccgctgggtttgctgggttg
acagacgaagagctccgtgccatggaaggacatgaccggcagcatttggaagccaggctc
cagtgtctgcagaacatccacacactcctagatgcagccatgttacagataaaccagtat
ctcaccgttctggcaaccattgggtcaccccgtcctacgcagctgccaagcagcctaaac
acttcatcctcctctcaagagacacccaccagagaatccaccactttcaattcacccgac
agtacctcttccccagggacctctccagcagtggaaccagactcgacaggtcaaacagat
gatccatctggattggtgggtgcggagggatacacagagccagctgggcatgaggaagaa
gaggagcggcctttaccgggggagcctgacacagctgagcttcgcaggcgccggcttcag
aaactggaatcctcctctcccccttcccattga
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