Caretta caretta (Loggerhead turtle): 125640617
Help
Entry
125640617 CDS
T09292
Symbol
CCDC88B
Name
(RefSeq) coiled-coil domain-containing protein 88B isoform X1
KO
K25392
girdin
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccay03037
]
125640617 (CCDC88B)
Cilium and associated proteins [BR:
ccay03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125640617 (CCDC88B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
SPAM
APG6_N
Motif
Other DBs
NCBI-GeneID:
125640617
NCBI-ProteinID:
XP_048715356
LinkDB
All DBs
Position
7:complement(30784863..30811682)
Genome browser
AA seq
1419 aa
AA seq
DB search
MQDEPQSPSAPDRQARAREYFLHLVDGAFLTQVMGLIRDPTPWRARPPQSQQGDERLRLQ
TLHALLQQLRAFYQDDLQQLILMTPPNVQLLARDPLTEQGIEEMRKLLLLLLGAAVQCER
KAEIIERIQGLDIETQTALASAIQEVTQDPGVVLSLQWGALAELHPLELTRVLQDLSSRL
RGLVQERDASAERLWELQQERELSSPHGPLPPEGPWDNRQHLRVQLADARGQARRLRQEL
EEKAEELLDQHQELQELEAELRRLRQEHRAVAGEARLAGLYRDELDAMREKAARAERLQG
ELSALRERLPALERCRGKLEEERAFSQALLDSKAQLEGQLESARARAQHLSQFEKENLLL
RSQLDQVEEEQERERQRLEELQQEKVLLEGELRQNLGVPQHLSWEEEQEPSEAPNDPAET
PKSLSYEVTEVTSSRLLALERENQELRRRLQEALEAPGEPRSPGLEQKNKALSKEVQRLG
AELETQRARSCQEREELSAALLGEKEQLERELRSLQEQRHCQESLQSQGDPGAWAQEQQE
ALAESGRRLCQVEEQASSLQEALRRLEATHAKALEGLTASQEARGRLEQELLRLRQELEQ
QRLEALLLGQLEAEAQALEKEREALRAELSQAERELVETRGNLEAERQRAGRQAEQAREA
AEELRASERELGTLQRGLEQHKAALTQLEGERGALEAVLSQAERERRALDKETRRLRAQT
QAQEEALAEQGRRAAQLEAQSRLQALELGGLRERVQRLRELEQESKGLREQLAAERKAAV
ALQEELLGEKVKGQEREADLVRLREQLERREEEQRLLEEQQGTQQSQYQSLEQRLESSFR
EMLALKEEKIGALRSRVEELLALNQHLGKELCQVKISPGAHPPEALGAVEQDQGDPEPTL
GLRAELESDTLSKHLIEVERSNAALLAEKEALMGRLGQLESQLGALQGELLSLQGQSGGL
REETGRLQAQCGALQVEQAALRSQKAALEARASELRERLAGLEAEVRAARQERDEWRGRH
EGLVRNHDKLALLHERQGAELEGLLGKQAGLKGALRALEQEHRELQDRQSHLVAQQAGLE
QRETALRGERERLEGAEREHRQLREQHARLQDEHARVQAVLAAAERAQEEQQGELRGLRG
RLTGLQLEQARLEAEGTALREQNHQLEVALGRLGDQCELLAQLKGNQEEENRHLLQEIQK
LSQENRTLLERSMESREQYHSEQRQHLDKLNELRREKQKLVEKIMDQYRVLEPALPKSKK
SSNWIADKMKKLMKPRREPPREQQRPLAEGANSIENLPGLGQDGRAPDGDSSAPASPVPL
RKASSMLSLPDTQRLNLRLNRRKLSSRVLVSESFGPGDATPRQRFRQRQRPLAFLGGSRE
EAAVSWEAQEGQRLPSAGSEERGLLQGKEKAPLSPQLSQ
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgaaccccaaagccccagtgccccagacaggcaggcgagggcccgggagtat
ttcctgcacctggtagatggagccttcctcacccaagtcatggggctgatcagagacccg
accccttggcgtgcccggccaccccagagccagcagggtgacgagaggctgcgactccag
accctgcatgccctgctgcagcagcttcgtgctttctaccaggatgatctgcagcagctg
attctaatgactccccctaatgtgcagcttctcgccagagaccccctgacagagcagggc
atcgaggagatgcggaagctgctgctgctgctgctgggggctgccgtgcagtgtgagcgg
aaggcagagatcattgaacggatccaggggctggacattgagacccagactgcgctggcc
agtgccatccaggaggtgacacaggacccaggggtggtgctgagcctgcagtggggggcg
ctggctgagctgcaccccctggagctgacacgggtcctgcaggatctgtcctcccggctg
cggggcctggtgcaggagcgggatgcaagtgcggagaggctgtgggagctgcagcaggag
cgagagttgtcgtccccccatggcccgctgccccctgaggggccctgggacaatcgccag
cacctcagagtgcagctggctgacgcccggggccaggctcggcgcctgcggcaggaactg
gaggagaaggccgaggagctgctggatcagcaccaggagctgcaggagctggaggctgag
ctgaggaggctgcgacaggagcaccgggcggtggcgggggaggcgcgcctggcgggcctg
taccgggatgagctggatgccatgcgggagaaggcggcccgggctgagcgcctgcagggg
gagctctcggccctgagggagcgactgcctgccttggagcggtgccgggggaagctggag
gaggagcgggccttctcccaggccctgctggacagcaaggcccagctggaggggcagctg
gaatctgctcgcgcccgagcccagcacctgtcccagttcgagaaggagaatctactgctg
cggagtcaattagatcaagttgaggaggagcaggagcgggagcgtcagcggctggaggag
ctgcagcaggagaaggtgttgctggagggggagctgaggcagaatctgggggtgccccag
cacctgtcctgggaagaggagcaggagcccagtgaggctcccaatgaccctgctgagact
cccaagtccctgagctacgaggtgaccgaggtgacatccagccgcctactagcactggag
cgggagaaccaggagctgcgccggaggctgcaggaggcactagaggccccgggagaaccc
aggagtccgggccttgagcagaagaataaggccctcagcaaagaggtgcagcggctgggg
gcagagctggaaacccagcgggcccggagctgccaggagcgggaggagctgagtgccgcc
ctgctgggggagaaggagcagctggagcgggagctgcgcagcttgcaggagcagcggcac
tgccaggagtctctgcagagccagggggacccaggcgcctgggcccaggagcagcaggag
gcactggcagagagtgggcgccggctgtgccaggtagaggagcaggcatccagcctgcag
gaggcattgcgccggctggaggccactcacgccaaggccctggaggggctgacggcctcc
caggaggcccgggggcgcctggagcaggagttgctgagactgcggcaggagctggagcag
cagcgcctggaggccctgcttctggggcagctggaggccgaggcccaggcgctggagaag
gagcgggaggcattgcgggcagagttgagccaagccgagcgggagctggtggagacccgg
ggcaatctggaggcggagcggcagcgggctgggcgccaggctgaacaggcgcgggaggcc
gcggaggagttacgggcgtccgagcgcgagctgggcaccctgcagcgcgggctggagcaa
cacaaggcggccctgacccagctggagggcgagcgaggggcgctggaggcggtgctgagc
caggccgagagagagcgccgggcactggacaaggagacccggcgtctgcgggcccagacc
caggcccaagaggaagcactggcagaacagggccgccgggccgcccagctggaggcccag
agccggctgcaggcgctggagttgggcgggctgagagagagagtgcagcggctgcgggag
ctggagcaggagagcaaggggctgcgcgagcagctggcagctgagcgcaaggccgcagtc
gctctgcaggaggagctgctgggcgagaaggtgaaggggcaggagcgggaggctgacctg
gtgcggctgcgggagcagctggagcggagggaggaggagcagcgcctcctggaggagcag
cagggcacccagcagagccaataccagagcctggagcagcggctggagtcgtccttcagg
gagatgctggctctgaaggaggagaagatcggcgccctccgcagccgggtggaggaactg
ctcgccctcaatcagcacctggggaaagagctgtgccaggtgaaaatcagccctggggcc
cacccacccgaggctctgggggccgtggagcaggaccagggggaccccgagccgacgctg
gggcttcgggctgagttggagagtgacaccctgagcaagcatctcatcgaggtggagcgc
agcaacgcggcgctgctggcagagaaagaggctctgatggggcggctggggcagctggag
tcgcagctgggtgccctgcagggggagctgctgagcctgcaggggcagagcggaggcctg
cgggaggagactgggcggctgcaggcccagtgtggggccctccaggtggagcaggcagcg
ctgcgctcccagaaggcagccctggaggcccgggcgtcggagctgcgggagcgactggca
gggctggaggctgaggtgcgggcggcccggcaggagagggatgagtggcgcgggcgccac
gaagggctggtgcgcaaccatgacaagctggcgctgctgcacgagcgccagggtgctgag
ctggaggggctgctgggcaagcaggccggcctcaagggggccctgcgggcactggagcag
gagcaccgagagctgcaggacaggcagagccatctggtggcacagcaggccgggctggag
cagcgggagacagccctgcggggggagcgggagcggctggagggggctgagcgggaacac
cggcagctgcgggaacagcacgcccggctgcaggacgaacatgcacgggtgcaggcggtg
ctggcagcggccgagcgagcgcaggaagagcagcaaggggagctgcggggcctgcggggc
cggctgacgggactgcagctggagcaggcacggctggaggctgagggcaccgccctgcgg
gagcagaaccaccagctggaggtggcgctgggccggctcggagaccagtgtgagctcctg
gcccagctgaaggggaaccaggaggaggagaaccgacacctgctgcaggagatccagaaa
ctgagccaggagaaccgcaccctgctggagcgcagcatggagagccgggagcagtatcac
tcggagcagcgccaacacctggataagctgaacgagctgcgccgggagaaacagaagctg
gtggagaagataatggaccagtaccgagtactggagccagcgctgcccaagagcaagaag
agcagcaactggatcgcggacaagatgaagaagctgatgaagccgcggcgcgagcccccg
cgggaacagcagcgccccctggctgagggggccaatagcattgagaacctgccgggactt
ggacaggatggacgcgcacctgatggggactccagcgcccctgcttcgcctgtgcccctg
cgcaaggccagcagcatgctgagcctgcccgacacccagaggctgaacctgcggctaaat
cggcgcaagctgagctcccgcgtcctggtcagcgagtccttcgggcctggggacgccacc
ccccggcagcgcttccgccagcgccagcgcccccttgccttcctggggggctcccgcgag
gaggccgctgtctcctgggaggcccaggaggggcagagactccccagtgctggcagtgag
gagagagggctactgcaagggaaggagaaggcaccgctctcgccccagctcagtcagtga
DBGET
integrated database retrieval system
