Caretta caretta (Loggerhead turtle): 125640688
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Entry
125640688 CDS
T09292
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125640688 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125640688 (XPC)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125640688 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
125640688
NCBI-ProteinID:
XP_048715511
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Position
7:20919277..20939963
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AA seq
946 aa
AA seq
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MGKKRKGSLQQETASKKLKGEPAAAATRAPQIPRQEPEDDFEEEKPSVKKKLSKVLGGNK
KKGDCDTEVHSLPGRSSRQKGGKSVAKEENNITVKNKGETCRALPSPSQKETMKRKSTIK
KEMDEDDDGDGSEDEWEDVEELEDPVLDKSGTAAALPALVLPSKPVEIEIETPEQAKKRE
RREKRKAEFETYLRRMMKRFNKEVHEDTHKVHLLCLLANGFHRNRVCNQPDLQAIGFSII
PTHFTKVPAGRIDLLYLSNLVKWFVATFTINTELSVDRESLQSTLERRFAIYAARDDEEL
IHIFLLILRALQLLCRLVLSLRPIPLKEPAGKGKSSCKKHSAKKPKAPSRKSSCKGAKQQ
ETLSGSEGADKEPNTSGSKRKSKSKVIKDCQEQKESSDDESNLGEGEEEGARRPRNKCQR
RVTLKVSYKEESGSDEGSVSEFEASEEEDSHFSDEDFETVSKRQKRTSEPHKARVVVENS
RKARSSEPKGPKNSGGNEQLLAKAASPGSSNTPRKRNKIISSDDDEEQEVVKVTGTDQWL
EIFVEREDRWVCVDCVRGIVGQPSLCFKYATKPVSYIVGIDSNGHVKDVTQRYDPAWMTS
TRKCRVDPQWWEDTLEPYRSPFVEREKKEEREFLVKLQDQPLPTAIGEYKNHPLYALKRH
ILKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKEARVVRIGEVPYKMVKGYSN
QARKARLAEPSNREKDDLGLFGLWQTEEYQPPVAVDGRVPRNEYGNVYLFLPCMLPIGCV
QLKLPNLHRVARKLDIDCVQAITGFDFHGGYSHPVTDGYIVCEEYKEVLVAAWENEQAEI
EKKEKEKREKRALGNWKLLTKGLLIRERLKQRYCRKSEASGSMIEKGAGFSSDEEGEPSS
KTPAEDVVVSWPLNRQVEEQRKEKKGRKSKREKKGEVAHLFPFEKL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagcgcaaaggttccctgcagcaagagactgccagcaagaaattaaaggga
gagcctgctgcagcagccaccagggccccccaaattcccaggcaagaaccagaggatgat
tttgaagaggaaaagcccagtgtgaagaagaagctctcaaaagttcttggtggaaataag
aagaaaggagattgtgacactgaagttcatagcctaccaggtagatcttcaaggcaaaaa
ggaggaaaatcagtagcgaaggaggaaaataacataactgtaaaaaacaaaggggaaacg
tgccgtgctttaccgagcccctctcagaaggagaccatgaagagaaaatcaactattaaa
aaagaaatggatgaagatgatgatggagatggaagtgaggatgagtgggaggatgtggaa
gaactcgaagatcctgtcctggataaatcaggaacagctgctgcccttcctgcgctagtg
ttgcccagcaaaccagttgagatagagattgaaactccagagcaggcaaagaaaagagag
agaagagagaaaaggaaagctgagtttgagacctatctccggagaatgatgaaacgcttc
aacaaggaggttcatgaagatacgcataaggttcacctactatgtttgctagcaaatggt
ttccataggaacagggtctgcaaccagccagatcttcaggctattggcttttccatcatt
cccacccacttcactaaagtgcctgcaggtcgtatagaccttctctacctttccaacttg
gtgaaatggtttgttgcaaccttcactatcaacactgaactctctgttgatcgagagagc
ctgcagtccactttagagaggcgcttcgccatctatgctgcaagagatgatgaagagttg
atccatatatttttacttattctacgagcgttacagttgctctgccggcttgtgctgtct
ttgcgacccattcccctgaaagagccagcgggaaagggcaagagctcctgcaagaagcac
tctgccaaaaaacctaaggctccgtcaagaaaaagctcctgcaaaggagccaagcaacag
gaaactctgtcagggagtgaaggagctgacaaggaaccaaacacctctgggtccaaaagg
aaaagtaagtcaaaggtgatcaaggattgccaggaacaaaaggaatccagcgatgatgaa
agcaacttgggggagggggaagaggaaggagcacgcaggcccagaaacaaatgccaacga
agagtgaccttgaaagtgtcttacaaagaggagagtggaagtgacgagggcagtgtttct
gagtttgaggcttcggaggaggaagacagtcatttctctgatgaggattttgaaactgtc
tctaagaggcagaagagaacatcagaaccccataaagcaagggtagtagttgaaaatagc
aggaaagccaggtcttccgaaccaaaagggcccaagaattcaggtggaaatgagcaattg
ctggcaaaagcagcttctccaggctcttctaatacacccaggaagaggaacaaaataatc
tctagtgacgatgatgaggagcaggaggtggtgaaagtgacaggcacagatcagtggttg
gaaatctttgttgagcgggaagacaggtgggtgtgtgtggactgcgttcgtggcatcgtt
ggccagccctctctgtgttttaaatatgccaccaaaccagtttcctatattgtgggaatt
gacagcaatgggcatgtaaaggacgtaacgcaaaggtacgacccagcctggatgacttcg
acaaggaaatgtcgtgtggatcctcagtggtgggaagacacgctggaaccatatagaagc
ccctttgtggaaagagagaagaaggaagaaagggagtttctagttaagcttcaagaccaa
cctctgccgacagccattggagagtataaaaatcaccctctttatgcattgaagaggcat
atcctgaaatatgaggccatctaccctgagactgctgctatcctaggatactgcagagga
gaggcggtatattccagagactgtgtgcacacactgcactcccgggacacctggctgaag
gaagctcgcgtggtgaggattggggaagtgccctataagatggtgaaaggatattccaac
caggcaaggaaagcacgactggcagagccttcgaacagggagaaagacgatttggggctg
tttggcctgtggcagacggaggagtaccagcctcctgtggcagtggatggaagggttccc
cggaatgaatatggaaacgtgtatctcttcctgccctgcatgttaccaataggctgtgtg
cagctaaaacttcccaatctgcatagagtggcacggaaactggacattgactgtgttcaa
gccatcactggatttgattttcacggtggctactcacacccagttactgatggctacata
gtctgtgaagaatacaaagaggtgctcgtcgcagcctgggagaatgaacaggcagagata
gaaaagaaggaaaaggagaaaagagagaagagagcactgggtaactggaaattgctgaca
aaaggacttctcataagagagagactgaagcaacgctactgcagaaagagtgaggcatcc
ggatccatgattgagaaaggagctggattttcttctgatgaagaaggggagccaagttca
aagactccagctgaagatgtggtggtttcttggcctctgaatcggcaagtggaggaacaa
agaaaagagaaaaaaggcagaaagagcaagcgggaaaagaagggagaagtagcacacttg
ttcccctttgagaagttatga
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