Caretta caretta (Loggerhead turtle): 125640741 Help Entry 125640741         CDS       T09292                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism ccay  Caretta caretta (Loggerhead turtle) Brite KEGG Orthology (KO) [BR:ccay00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ccay03000]     125640741 (RC3H1)    04121 Ubiquitin system [BR:ccay04121]     125640741 (RC3H1) Transcription factors [BR:ccay03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     125640741 (RC3H1) Ubiquitin system [BR:ccay04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     125640741 (RC3H1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10 Motif Other DBs NCBI-GeneID:  125640741 NCBI-ProteinID:  XP_048715548 LinkDB All DBs Position 8:complement(48402551..48509144) Genome browser AA seq 1144 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IDLLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILSDE GAVDLPSRKSSALPNGIVSTGSTVTQLISRGTDSGYDSALKPGKIDHLSSSAPGSPPDLL ESVPKSSISALPVNPHPVPQRGPTDLPPMSFSKQPQMVSRGSQLYPAQQADVFYQDPRGA APPFEPSPYPQGVYYPTQSSQCMSRFVRPPSSAPEPGGPYLDHYPPYVQDRMVNSQYGTQ PQQYPPMGQPMYQHYESRRVYPSAQPYQREEIVRGSPVPIDVPHGAAPPYVPESRDRYQQ AEGYYPVGPHLSQIRSSYHREPYNRLPPPSQTHPSLDELHRRRKEIMAQLEERKVISPPP FAPSPTLTHPFHPEENQLFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDA KPKDVVAAGSVEMANIDSKGIRDQRLDLQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSK TMYQSSGPMQAMAVQGASTKSINISDYSPYGTHGGWGASPYSPHQNIPSQGRFSDRERLS MSDVASHGKPLPSADREQQLRLELQQLNHQISQQTQLRGLEAVNNRLLLQREATTLAGQP QPPPHKWPAMISSEQLSMELHQVEREIGKRTRELSMETQSSLDMKSNLGTNKQTENGQVE PQSKVPAEDLTLTFSDVPNGSVLSQENISLLSNKTTSLSLSEDPEGGGDHQDSQRTGVAP TSSP NT seq 3435 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacacagact tttgatgaaacgatccggaagcccatcagcttgggctgtggccacactgtctgcaagatg tgcctcaacaagctccaccgtaaggcatgccccttcgaccagaccactatcaatacagat attgatctcctccctgtgaactcagccttgttgcagctagtgggtgctcaggttcctgag cagcagccagttactttgtgcagtggagtagaagacaccaaacattatgaggaggccaag aaatgtgtggaagaactagcgttgtacctcaaaccactcagcagtgcgagaggtgtgggt ctgaacagtaccactcagagtgtgctaagtcgccccatgcagagaaagcttgtgacgcta gttcactgccagctagtagaggaagaagggcggatcagggccatgcgtgcagcacggtca cttggtgaaagaacagtcacagagctcattcttcaacatcaaaacccccagcaactctct tctaacctctgggctgcagtgagggccaggggctgtcagttccttgggccagcaatgcaa gaggaagcactgaagctggttctgctggctctggaagatggatctgctttgtcacgaaag gtcttggttctctttgtagtgcagagattggagccacgatttcctcaagcttctaaaacc agcattgggcatgttgtccagcttctttacagagcctcctgcttcaaggtgactaaacgt gatgaggactcctccctgatgcagttgaaggaggagttccgtacctatgaagctctgcga agggaacatgattcccagattgtgcagattgccatggaagcaggtttacgcattgcaccg gatcagtggtcctcgctgctatatggagaccagtcccacaaatcccacatgcagtccatc attgacaagttgcagaccccagcctcatttgcacagagtgttcaagaactaaccattgct ctccagaggactggagacccagccaacctgaacaggcttcgacctcacctagagctcttg gcaaatattgaccctagtccagatgccccacccccaacatgggaacaactagaaaatgga ttagttgctgtgaggacagtggtacatggactagttgattacattcagaatcacagcaag aaaggaacagatcagcagcagcctcctcaacacagcaagtataagacgtatatgtgccga gacatgaagcagagaggagggtgtccccgtggagccagctgcaccttcgcacattcgcag gaggaattagaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt gcctccttgggccagctaaatgaggtgggcctgccttcagcagctatcctctcggatgaa ggggcagtggacttgcccagtagaaaatcctctgccttgccgaatgggattgtgtctaca ggcagcacagtgacgcagcttatctcccgagggaccgactccggctatgattctgctctg aagccagggaagatcgaccacctgagcagcagtgctcctggatcccctcctgacttgctg gagtctgtccccaagagctctatttctgccttaccagtgaacccccaccctgtgccccag agaggaccaacagacctgcctccaatgtctttttccaagcaaccccaaatggtatcacga ggatcacagttgtatcctgctcaacaagcagatgtgttttatcaggatcctagaggagct gccccaccatttgagccgtcaccttatccacaaggtgtgtactatcctactcagtcctca cagtgcatgtctcgttttgtccgacctccatcatctgctcctgaacctggtggtccttac ctagaccattacccaccctacgttcaggatcgtatggtgaattcgcagtatggcacacag ccgcagcagtatcctcccatgggacagcctatgtaccaacactatgagagccgtcgtgtg tacccctctgcccagccataccagcgggaagagattgtccgaggaagccccgtgcccatt gatgttccacatggagctgcacctccctacgtacctgaatccagagacagataccagcaa gcggagggttattatccagtgggtccacatctcagtcagatcagatcttcataccacaga gagccttataaccgacttccacctccatctcaaacccatcccagcctggatgagcttcat cgacgaaggaaggaaatcatggcccagttagaagagaggaaggtgatctccccacctccc tttgcaccgtcaccaactttgactcaccccttccacccagaggagaaccagctttttgtt tttgtacagtacttggatgaagacttgaaggtagctgggaaatacaaaggaaatgattat agccagtactctccttggtcgtgtgacaccattggctcctacattggaaccaaagatgca aaacccaaagatgttgtggcagcagggagtgtagagatggcgaacatagacagtaaaggc atacgtgaccagcggttggacctacagagaagggcagcagaagctggggatgatgacctc atcccatttggagaccggccaactgtatcaaggtttggggccatctcgcgtacttccaaa acgatgtaccagagttctggccccatgcaggccatggcggtacagggagcttccaccaaa tctatcaacatttcagattacagtccatatggaactcatggcggctggggagcttctcca tattcaccccaccaaaacataccttctcagggacgcttcagtgacagggagagattgtcc atgtcagatgtggccagtcatgggaaacccttaccttcagctgacagggagcagcaactc aggctggaactgcagcaactaaaccatcagatcagccagcagacacagttacgaggactg gaggctgttaataacaggctgctgttacagagggaggcgaccaccctggcaggccagcca caaccaccacctcataaatggcctgcaatgatctcaagtgaacagctgagtatggaactg caccaggtggagagggaaatcgggaagagaacccgtgagctgagcatggagacccagtct tcactggacatgaaaagcaaccttggcaccaataaacagacagaaaatgggcaagttgaa ccacaaagcaaggttccagctgaggacctcacactgacgttcagtgatgttccaaatgga tcagtcttgtcgcaagagaacatcagcctcctatcaaacaagaccacatctctgagcctg tcagaggatccagaagggggaggagaccaccaggactcccagagaacaggagttgcaccc acctcttctccatga

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