Caretta caretta (Loggerhead turtle): 125640770
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Entry
125640770 CDS
T09292
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125640770 (PCDH12)
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125640770 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM51
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
125640770
NCBI-ProteinID:
XP_048715612
LinkDB
All DBs
Position
8:complement(40621185..40655479)
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AA seq
1150 aa
AA seq
DB search
MLLLSHFLLQFLVLCWHFFLFVDCQEVAPFAMQYKVLEEVPSGTVIGTLSEDFGWKERSE
PVETFQQLHFPKELPVCVGSGDGLLSTAGRLDREQLCRHNDPCLFSFDVLAATHLALIHV
EIQVLDINDHAPRFPKPELELEISESASLRTRIPLDRALDPDTGSNALCSYSLSPSDHFA
LDIISGSDGTKHAELVVVKEVDRELHSSFDLVLTAFDHGEPPKSGTTLLRVIVLDSNDNS
PMFAESSLTVEIWEDALPGTILINLTATDPDQGPNGEVEYSLSKHASLEVLNMFIIEAKT
GSVVLRRPLDYEENHTYEVDVQARDLGANPIPAHCKILIKVLDVNDNAPDVHITWAAQVP
VLSEALPKDSFVALVTVSDPDSGNNGQVHCYLSQGLEHFKLKRTNRYTYMLLTNAILDRE
RWAEYNLTLMVQDNGNHSLATRKHLTVCISDVNDNPPLFERITYDVTIAENNMPPSYLIT
VKAHDADLDFNGKVTYSIQDFLVSDLVSIDSKTGEIFALRAFDYEQMTSLEFLVTAEDGG
HPKLLSNVSVRVSLLDRNDNSPVIVQPVLVGGKARIIVLVNAQTGCLWLSLGNDSPQGTA
VTTMTPTPSSNVSLLFTISASDADSGLNGALHYDILSGNDASLFLIDPLSGQVFINSGNA
SSLIGREWELGVLVRDQGNSPLQAKAIVQLSFRNHLDQLTNSAQEAQMLSPSMVTVICLV
VLLGTFLLILALIVSICKREKKDNMAYNCREAEDAHRHQQLKKPHKHIQKTDIYLVPVLR
NRQAVQSEAEQVRSCEEALLKESSWDEPLQTPFHLTPTLYRTLRNQKGPAEQKDAFNLPA
IQCRPFHPHRLRNASKESSSLQDAQTHSKSLDKPQLKPLGDENCDLSLPTTQPSDMTLKR
QRIAKTDTGPREAHPHQHLLRSLVRLSMVALAEQDPTGELAMESPPVQQISQLLSLLHQG
QFQPKPNHRGNKYTANNGSRNAGLDADCLSIKDSGQGESEADDRDSENGLNLSIHQLVGE
ELESLLEPHAGLALERLTADPAWMARLSLSLTSSYKDNVFSPDSLHSSQDQEDAGRDKPR
TFETFGKVTGSDPNTARTRLASTFLSEMSTLFEMILSQKAQAHVTTASGLLQQLSACSKP
FGVDGDAPAV
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgctgtcacactttctgcttcaattcttggtgttgtgttggcactttttcctt
tttgtggattgccaggaggtggccccctttgctatgcaatacaaagtgttagaagaagtg
ccaagtggaactgtgatagggacattatctgaggattttggctggaaagaaagaagtgaa
ccagtagagaccttccagcagctgcatttccccaaggagctccctgtctgtgttgggtct
ggagatggtttgcttagcacagcagggcgattggacagagagcagttatgcaggcacaac
gatccatgcttgttctcttttgatgtgctggctgccacacacttggctttaatccacgtg
gagattcaggttttggacatcaatgatcatgcaccccgatttccaaaacctgagctggaa
ctagaaatatcagagagtgcatctttacgaacacgaataccactggaccgagccctcgat
ccagacactggctccaatgccctctgctcttactcattatcacccagtgaccactttgct
ttggatataatttctggatctgatggaactaaacatgcagaacttgtagttgttaaagaa
gtggacagagagctccactcttcttttgatctagtattgactgcctttgatcatggagaa
ccaccaaaatcaggcacaaccttacttagggtaattgttttagactccaatgataacagc
cccatgtttgcagagagttctttgacagtggaaatctgggaagatgctttgcctgggaca
attcttataaaccttacagccactgaccctgatcagggtcccaatggggaggtagaatac
tcactcagtaaacatgcttcactggaggtgttgaacatgttcatcattgaagccaagaca
ggcagtgtagttctgagacgcccactggactatgaagaaaatcatacctatgaagtagat
gtacaagccagggatcttggagccaaccctatcccagcacactgcaagatcctcattaag
gtcctggatgtcaacgacaatgccccagatgtgcacatcacttgggctgcccaggttcca
gtgctatctgaagctcttcctaaggacagttttgttgctctggtgacagtaagcgatcct
gattctggaaacaatggacaggtgcattgttaccttagtcaaggacttgagcatttcaaa
ttgaaaaggaccaacagatacacttatatgctgttgaccaatgccatcttggacagggag
aggtgggcagaatataacctgacattaatggtccaggacaatgggaaccactccttagcc
acgaggaaacacctcactgtatgcatcagtgatgtcaatgacaacccaccactgtttgaa
agaattacatatgatgtcaccattgctgagaacaatatgcctccatcctacctgattact
gtcaaggctcacgatgctgacttagattttaatggaaaagtcacttatagcatccaggac
ttccttgtttcagatttggtctctattgattcaaaaactggcgaaatctttgcgctcaga
gcttttgattatgaacaaatgacaagtctggaattcctggtgacagcagaagatgggggt
caccccaaacttttgtctaatgtttctgttagggttagtctgcttgataggaatgataat
tccccagtgatcgtgcagccagtgctggtgggaggcaaagcaaggatcattgttctagtc
aatgcacagaccggatgcctgtggctatccctagggaacgacagcccccaaggtacagca
gtaaccaccatgacaccaacacccagttcaaacgtttccctgctattcaccatatctgcc
agtgatgcagattctggcctgaatggggcccttcactatgatattctgagtgggaatgat
gccagtttgtttctcattgatccactgtcagggcaggtgtttatcaacagcggcaatgcc
agcagcctcattggcagggaatgggaattgggggtgttggtaagggatcaagggaactca
cctctacaggctaaagccattgtgcagttaagtttcagaaatcatcttgaccagctgaca
aactcagcccaggaggctcagatgctgagcccatccatggtgactgttatctgcctagtt
gtgctattaggcacttttcttcttattttggctttaattgtgtctatatgcaaaagagag
aagaaagataacatggcctacaactgcagggaagcggaagatgcccacagacatcagcag
ctcaagaagccccacaaacacattcagaaaacagatatatatttagtccctgtactcaga
aacaggcaagctgtgcagagtgaggctgagcaagttcgctcctgtgaagaagctttgctg
aaggaaagttcctgggatgaaccactgcagactccatttcatttaaccccaacactgtac
aggacccttagaaaccagaaaggtccagctgaacagaaagatgccttcaatctccctgca
atacagtgcagacccttccacccacacaggctaagaaatgcatcaaaagagagctcaagc
cttcaagatgcacaaactcactccaaaagcttagacaagccacagctgaagcctttggga
gatgagaattgcgacctctcactgccaactacgcagccctcagacatgactctgaagaga
cagagaattgccaagacagacacagggcccagggaagctcatccccaccagcacctcctg
agaagcctagtgaggctgtccatggtggcacttgcagagcaggaccccacgggagaactt
gctatggagtcgccacctgttcagcaaatctctcagctgctgtctctgctgcatcagggc
cagttccagcccaaaccaaatcacaggggaaacaaatacacagccaacaatggcagcagg
aatgcagggctggatgctgattgcctcagtataaaggacagtggccaaggagagagtgag
gcagatgaccgggattcagaaaatggactcaatctttccatacaccagctggtgggagaa
gaacttgagagccttctagagccccatgcagggctggccctggagaggctgacggcagac
cctgcatggatggctcggctctccctgtccctcaccagcagctacaaggacaatgttttc
tctcctgattctctgcactcttctcaggaccaagaagatgcagggcgggataaaccaaga
acctttgagacatttggcaaagttactggatctgacccaaacacagccaggacgagactg
gccagcactttcctctctgagatgagcaccctatttgaaatgatcttatcccagaaagca
caggcccatgtaacaacggcctcggggctcctgcagcagctgtctgcatgcagcaagccc
tttggggttgatggggatgctcctgctgtgtag
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