KEGG   Caretta caretta (Loggerhead turtle): 125640770
Entry
125640770         CDS       T09292                                 
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
  KO
K16499  protocadherin delta 2
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ccay04515]
    125640770 (PCDH12)
Cell adhesion molecules [BR:ccay04515]
 Cadherins
  Protocadherins
   125640770 (PCDH12)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th TMEM51 Baculo_11_kDa
Other DBs
NCBI-GeneID: 125640770
NCBI-ProteinID: XP_048715612
LinkDB
Position
8:complement(40621185..40655479)
AA seq 1150 aa
MLLLSHFLLQFLVLCWHFFLFVDCQEVAPFAMQYKVLEEVPSGTVIGTLSEDFGWKERSE
PVETFQQLHFPKELPVCVGSGDGLLSTAGRLDREQLCRHNDPCLFSFDVLAATHLALIHV
EIQVLDINDHAPRFPKPELELEISESASLRTRIPLDRALDPDTGSNALCSYSLSPSDHFA
LDIISGSDGTKHAELVVVKEVDRELHSSFDLVLTAFDHGEPPKSGTTLLRVIVLDSNDNS
PMFAESSLTVEIWEDALPGTILINLTATDPDQGPNGEVEYSLSKHASLEVLNMFIIEAKT
GSVVLRRPLDYEENHTYEVDVQARDLGANPIPAHCKILIKVLDVNDNAPDVHITWAAQVP
VLSEALPKDSFVALVTVSDPDSGNNGQVHCYLSQGLEHFKLKRTNRYTYMLLTNAILDRE
RWAEYNLTLMVQDNGNHSLATRKHLTVCISDVNDNPPLFERITYDVTIAENNMPPSYLIT
VKAHDADLDFNGKVTYSIQDFLVSDLVSIDSKTGEIFALRAFDYEQMTSLEFLVTAEDGG
HPKLLSNVSVRVSLLDRNDNSPVIVQPVLVGGKARIIVLVNAQTGCLWLSLGNDSPQGTA
VTTMTPTPSSNVSLLFTISASDADSGLNGALHYDILSGNDASLFLIDPLSGQVFINSGNA
SSLIGREWELGVLVRDQGNSPLQAKAIVQLSFRNHLDQLTNSAQEAQMLSPSMVTVICLV
VLLGTFLLILALIVSICKREKKDNMAYNCREAEDAHRHQQLKKPHKHIQKTDIYLVPVLR
NRQAVQSEAEQVRSCEEALLKESSWDEPLQTPFHLTPTLYRTLRNQKGPAEQKDAFNLPA
IQCRPFHPHRLRNASKESSSLQDAQTHSKSLDKPQLKPLGDENCDLSLPTTQPSDMTLKR
QRIAKTDTGPREAHPHQHLLRSLVRLSMVALAEQDPTGELAMESPPVQQISQLLSLLHQG
QFQPKPNHRGNKYTANNGSRNAGLDADCLSIKDSGQGESEADDRDSENGLNLSIHQLVGE
ELESLLEPHAGLALERLTADPAWMARLSLSLTSSYKDNVFSPDSLHSSQDQEDAGRDKPR
TFETFGKVTGSDPNTARTRLASTFLSEMSTLFEMILSQKAQAHVTTASGLLQQLSACSKP
FGVDGDAPAV
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgcttttgctgtcacactttctgcttcaattcttggtgttgtgttggcactttttcctt
tttgtggattgccaggaggtggccccctttgctatgcaatacaaagtgttagaagaagtg
ccaagtggaactgtgatagggacattatctgaggattttggctggaaagaaagaagtgaa
ccagtagagaccttccagcagctgcatttccccaaggagctccctgtctgtgttgggtct
ggagatggtttgcttagcacagcagggcgattggacagagagcagttatgcaggcacaac
gatccatgcttgttctcttttgatgtgctggctgccacacacttggctttaatccacgtg
gagattcaggttttggacatcaatgatcatgcaccccgatttccaaaacctgagctggaa
ctagaaatatcagagagtgcatctttacgaacacgaataccactggaccgagccctcgat
ccagacactggctccaatgccctctgctcttactcattatcacccagtgaccactttgct
ttggatataatttctggatctgatggaactaaacatgcagaacttgtagttgttaaagaa
gtggacagagagctccactcttcttttgatctagtattgactgcctttgatcatggagaa
ccaccaaaatcaggcacaaccttacttagggtaattgttttagactccaatgataacagc
cccatgtttgcagagagttctttgacagtggaaatctgggaagatgctttgcctgggaca
attcttataaaccttacagccactgaccctgatcagggtcccaatggggaggtagaatac
tcactcagtaaacatgcttcactggaggtgttgaacatgttcatcattgaagccaagaca
ggcagtgtagttctgagacgcccactggactatgaagaaaatcatacctatgaagtagat
gtacaagccagggatcttggagccaaccctatcccagcacactgcaagatcctcattaag
gtcctggatgtcaacgacaatgccccagatgtgcacatcacttgggctgcccaggttcca
gtgctatctgaagctcttcctaaggacagttttgttgctctggtgacagtaagcgatcct
gattctggaaacaatggacaggtgcattgttaccttagtcaaggacttgagcatttcaaa
ttgaaaaggaccaacagatacacttatatgctgttgaccaatgccatcttggacagggag
aggtgggcagaatataacctgacattaatggtccaggacaatgggaaccactccttagcc
acgaggaaacacctcactgtatgcatcagtgatgtcaatgacaacccaccactgtttgaa
agaattacatatgatgtcaccattgctgagaacaatatgcctccatcctacctgattact
gtcaaggctcacgatgctgacttagattttaatggaaaagtcacttatagcatccaggac
ttccttgtttcagatttggtctctattgattcaaaaactggcgaaatctttgcgctcaga
gcttttgattatgaacaaatgacaagtctggaattcctggtgacagcagaagatgggggt
caccccaaacttttgtctaatgtttctgttagggttagtctgcttgataggaatgataat
tccccagtgatcgtgcagccagtgctggtgggaggcaaagcaaggatcattgttctagtc
aatgcacagaccggatgcctgtggctatccctagggaacgacagcccccaaggtacagca
gtaaccaccatgacaccaacacccagttcaaacgtttccctgctattcaccatatctgcc
agtgatgcagattctggcctgaatggggcccttcactatgatattctgagtgggaatgat
gccagtttgtttctcattgatccactgtcagggcaggtgtttatcaacagcggcaatgcc
agcagcctcattggcagggaatgggaattgggggtgttggtaagggatcaagggaactca
cctctacaggctaaagccattgtgcagttaagtttcagaaatcatcttgaccagctgaca
aactcagcccaggaggctcagatgctgagcccatccatggtgactgttatctgcctagtt
gtgctattaggcacttttcttcttattttggctttaattgtgtctatatgcaaaagagag
aagaaagataacatggcctacaactgcagggaagcggaagatgcccacagacatcagcag
ctcaagaagccccacaaacacattcagaaaacagatatatatttagtccctgtactcaga
aacaggcaagctgtgcagagtgaggctgagcaagttcgctcctgtgaagaagctttgctg
aaggaaagttcctgggatgaaccactgcagactccatttcatttaaccccaacactgtac
aggacccttagaaaccagaaaggtccagctgaacagaaagatgccttcaatctccctgca
atacagtgcagacccttccacccacacaggctaagaaatgcatcaaaagagagctcaagc
cttcaagatgcacaaactcactccaaaagcttagacaagccacagctgaagcctttggga
gatgagaattgcgacctctcactgccaactacgcagccctcagacatgactctgaagaga
cagagaattgccaagacagacacagggcccagggaagctcatccccaccagcacctcctg
agaagcctagtgaggctgtccatggtggcacttgcagagcaggaccccacgggagaactt
gctatggagtcgccacctgttcagcaaatctctcagctgctgtctctgctgcatcagggc
cagttccagcccaaaccaaatcacaggggaaacaaatacacagccaacaatggcagcagg
aatgcagggctggatgctgattgcctcagtataaaggacagtggccaaggagagagtgag
gcagatgaccgggattcagaaaatggactcaatctttccatacaccagctggtgggagaa
gaacttgagagccttctagagccccatgcagggctggccctggagaggctgacggcagac
cctgcatggatggctcggctctccctgtccctcaccagcagctacaaggacaatgttttc
tctcctgattctctgcactcttctcaggaccaagaagatgcagggcgggataaaccaaga
acctttgagacatttggcaaagttactggatctgacccaaacacagccaggacgagactg
gccagcactttcctctctgagatgagcaccctatttgaaatgatcttatcccagaaagca
caggcccatgtaacaacggcctcggggctcctgcagcagctgtctgcatgcagcaagccc
tttggggttgatggggatgctcctgctgtgtag

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