Caretta caretta (Loggerhead turtle): 125641159
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Entry
125641159 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-1-like
KO
K16494
protocadherin beta
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccay04515
]
125641159
Cell adhesion molecules [BR:
ccay04515
]
Cadherins
Protocadherins
125641159
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
C2_SHIP1-2_2nd
Motif
Other DBs
NCBI-GeneID:
125641159
NCBI-ProteinID:
XP_048716622
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Position
8:37925146..37927585
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AA seq
812 aa
AA seq
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MADTERRTAFKRQVASLLLLLYVWAIGSGTVRYSVPEEMESGSFVANIGKDLGLDLKEFV
RRTRIVTEDGSQYFHLNGNTGDLFIKEKVDREILCGQTDPCTVQFEIILDNPLQSYRIEV
RVYDINDHSPVFLESELRFKIPETTPRGSRFPLESAQDLDVGNNSLQNYSISTNAHFRVY
TGEHSDGRKYAELVLDKVLDREHQPEVSLLLTAVDGGSPPRSGTAKILIIVLDASDNLPV
FSQTIYKARVLENSPKDYLVVTVSATDLDEGNYGEICYSFSQKSKENSKTFKINPMTGEI
RLTGAIDFEMIETYELNIQATDGGGLSAHCKVLVVVLDVNDNAPEVIVTSFISPILEDSL
AETVVALFIVRDRDSGDNGRTVCSIEDDVPFSLKTTLKNSYSLVXSTLDLEKVSTYDITI
SVQDLGSPSLSTEKTVTVKISDINDNSPEFNQTSYTMYVRENNGPGIKIGNIKAFDSDSE
QNAKVTYSLLPAEVGGLPLLSYISINSENGNVYVLRSMDYEQIREVQVTVSAADGGSPPL
SSEVIIRVVITDENDNAPFILYPLQNISSPANDLVPRSAEAGYLVTKVVAVDGDSGQNSW
LSYHLLKATDPGLFTVASPNGEIRTTRLITDRDTMKQKLIVLVRDSGELPLSSSATLNIA
LVDEFSDLYMQFTDVVEGDEKDDTLTTYLVISLCLISFLFLISIIIFSIIKLLRRRKYGG
TCMSASGIVDGDGNFQNNLTRNGTLSHNYRYEVCLTSGSGTSEFKFLRPVIASLPAQHSN
SGTDFVKEQDLVINSHLNKEMESASQVRLSAA
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcggataccgagaggagaacagcattcaaaaggcaagtcgcgtctctccttctgttg
ctttacgtgtgggccatcggatccggaacagttcggtattctgttcccgaagaaatggaa
agcgggtcctttgtagctaatataggaaaggatctagggctagacctgaaggagtttgtt
cgcaggactcgcattgttactgaagacggcagccagtatttccacctaaatggcaataca
ggcgacttgtttattaaagagaaagtggacagagaaatattgtgcgggcaaactgacccc
tgcacggtgcaatttgaaataatcctggataatcctttacaatcttatcgaattgaggtg
agggtttatgatataaatgatcattctccagtgttcttggaaagtgaactacgttttaaa
atcccggaaacgactccccgaggatctcggtttcctctagagagcgctcaggacttagat
gtgggaaacaacagcctccagaactacagcattagcaccaatgcccattttcgtgtgtat
accggtgaacacagtgacggcaggaaatatgcagagctagtgctggataaagtattggat
agagagcatcagccggaggtgagtctgttgctcacggctgtagatggcggctcccctccg
agatccggcacagcaaaaatccttatcattgttctggatgccagcgacaatctccctgtg
ttctctcaaaccatttacaaagcccgagttctggaaaacagccccaaagattatctggtt
gttactgtttctgctactgatttagacgagggaaattatggggaaatatgctattctttc
agccaaaaatccaaagaaaatagcaaaacctttaagataaatccaatgacaggggaaatt
cgactcacaggcgcaattgactttgaaatgattgagacttacgagttaaacattcaggcc
acagatggcgggggtctgtctgcgcactgcaaagtgcttgttgtcgttctagatgtgaat
gacaatgccccagaagtgatagtaacatccttcatcagcccgatacttgaggactccttg
gctgaaacagtggtggcgcttttcattgtcagagaccgggactctggggacaacgggaga
acagtatgttccatagaagatgacgttccgttttctttaaaaacaactttaaaaaattcc
tactctctggtgnaaagtacacttgacctagagaaagtttccacctatgatataaccatc
agtgttcaggatttgggatctcccagtctctctactgaaaaaaccgtcacagtgaaaata
tccgacattaatgacaattccccagagttcaatcaaacatcatacactatgtatgtccga
gaaaacaacgggccagggataaagattggcaatatcaaggcttttgattcggactcagag
cagaatgccaaagtgacatactctctattgcctgctgaggtaggtggccttccgctgctc
tcctatatctccataaactcggaaaatgggaatgtgtacgttctgcgatccatggattat
gaacagataagagaggtccaggttacagtgagcgctgcagatggcgggtcccctccactg
agctctgaagtcattatccgagttgtgataactgatgaaaatgacaacgcgcccttcatt
ttataccctctgcagaacatcagctccccagctaatgacctggttcccagatcggcggag
gcgggttacctggtgacgaaggtggtggctgtggatggggattccggtcagaattcttgg
ctttcctatcacttgttgaaggccactgacccaggtctcttcactgtggcttccccaaat
ggtgaaatcagaaccacgaggctaataacagaccgagatacgatgaagcaaaaactcatt
gtgcttgttagagacagtggagaattgcccctttcttcatctgcaactttgaacatagct
ttagtggatgagttttcggacttgtatatgcagtttactgatgtagttgagggagatgaa
aaggatgacacattaactacgtatttagtaatttctttgtgtttaatttcgtttcttttt
ctaatttcaataattatattttcaataatcaagctacttcggagaagaaagtatggagga
acatgcatgtctgcttctggcattgttgatggcgatggcaacttccagaataatttgacg
cgtaacggaactctgtctcataattatcgttatgaagtttgtttaacatctggttcggga
actagcgagttcaaattcctgagacctgttatcgccagtctcccagctcagcacagcaat
tctggaacggatttcgtgaaagaacaggatcttgttattaactcgcatctgaataaagaa
atggaatctgccagtcaggtgagactctctgctgcttaa
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