Caretta caretta (Loggerhead turtle): 125641262
Help
Entry
125641262 CDS
T09292
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125641262 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125641262 (UIMC1)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125641262 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
125641262
NCBI-ProteinID:
XP_048716856
LinkDB
All DBs
Position
8:1212705..1270732
Genome browser
AA seq
852 aa
AA seq
DB search
MPRKKKHAESPDFQGPDGEEEEPRGLVDAKKKRSFVDAFIVISDSDGEQESKEENGLQKK
RTKQQLDRVKFAAKRKIAQMTEDEQFELALKMSEQEARQVNCREEEEEELVRKAIAESLN
SYQPLDSPAETSAPPPAQTTCVRAQSHPTERGKAEIHGAVPPGPDSPRSDCSSHSRSTKA
DGNGQADVAKSPLVVLTRLSQEIVESSLLSSIIVPPGKSQPLTKSNEKPSSPARSNSRDT
LPSPSGERLISLSPTFARFTPGTWQLTPRRLFSGSCSTSKAMGGEQDKQPPAGTGSSAGE
PTAGSSAVLRKSRALELGSIPRKNCGAGGPECAPQRGHSGQGSVCAEHVERTAGPDKAPE
LCTLSMADEKCKQEDARDTVHYYWGIPFCPKGVDPNQYTQVILCQLEVYQKSLKQAQRQL
LQKKEFGDPVVPCSSPLSQNEHGKGERINRENGVPDDTEDGRKEPESTAWLLSTKNRELE
QNPGQNLEEEKNSMSEDEPTTSYCQGPTCATHQPPAKASQALFAEDMPEDGEPMQITQSI
SALTPFGSKRSPEVAVESPAAEEEIPVCPETQPNPSEAIEPEREELHSASKDAPMQAAGD
EEAGNTASECSPSADDSVSCPLCDRGFPATEIELHAMYCNGIVAQDANEDVPDAWRAGLR
RCLLAPLIRTLVWNDCSSYWQSALTQRQRETRSRAGRGRDVPTPIDVDKCEKCYLCKARV
PLAEYPRHVDSCLQTARDAQGNRRLRSAKDVGRSEGRLLSMLEMSECKSADADAGAMLAA
GGDPRHTPSGAEEEAGCSLARESPLPHLAFSDLPIPPYVSAPEAAGYAGGFQQQVACSQQ
QNKGSRRRRRKF
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaagcatgcagaaagccctgactttcagggcccggacggggaggag
gaagagccgaggggcctggtcgacgccaagaagaagcgtagttttgtggatgcctttatt
gttatatctgacagcgatggagagcaggagtcaaaggaggagaatggattacagaagaaa
agaaccaagcagcagctggacagagtgaagtttgctgctaaaagaaaaattgcacagatg
actgaagatgagcagtttgaattggctctgaaaatgagtgagcaggaagccagacaagtg
aactgccgggaagaggaagaagaggagcttgtgaggaaggccatcgccgagagccttaat
agctaccagcctttagattcccctgctgagacctctgcaccacctcctgcacagacaacg
tgcgtgcgagcgcagagccacccgactgagcgaggaaaggctgagatccatggagctgtg
ccacctggccctgactccccacggtcggactgcagctcccactcccggagcacaaaagct
gatgggaatggacaggcagatgttgccaagagccccctcgtagtgctgacgaggttaagc
caggaaatagttgaaagctcactactatccagcataatcgtacctccagggaagagccag
cctttaacaaagtcaaatgaaaagccttcctcaccagcaagaagcaattccagggacacg
ttacccagcccttctggggagaggctgatctccctgagtcccacctttgcccggtttact
ccgggcacttggcagctgacacctcggagattgttttcaggctcgtgcagcacttcaaaa
gcaatgggaggggaacaagacaagcagcctcctgctggtactggaagttctgcaggggag
cctactgctggcagctcagcagtgctccggaagagccgggccctggagctgggcagcatt
ccaaggaagaactgtggagcaggaggccccgagtgtgcaccacaacgtgggcacagcggg
caaggctctgtttgtgctgagcacgtggaacgtacggcgggacccgacaaggcacctgag
ctttgtacactgagcatggccgatgaaaagtgcaagcaggaagatgctagagacacagtg
cactattattggggtattccattctgccctaaaggggtggacccaaaccagtatacccaa
gtcatcctgtgccagctggaggtgtatcagaagagcctgaagcaggctcagaggcagctt
ttgcagaagaaggagtttggtgatccagttgtgccctgctcttctcccctgagccagaat
gagcatgggaaaggggagcgaataaacagggaaaatggtgttcctgacgacacagaagat
ggcaggaaggagccagagagtactgcctggcttctctccacaaagaacagggagctcgag
cagaatccagggcagaacttggaagaggaaaagaactctatgtccgaggatgaaccaacc
accagctattgccaggggccaacctgtgcaacacaccagccgccagcaaaggcctcccag
gcgctatttgcagaggacatgcctgaagatggggaaccaatgcagattacacagagcatt
tctgccttgaccccatttggcagtaagaggagcccagaggtggccgtggagagccctgct
gctgaagaagagatccctgtttgccctgagacccagccaaatccatcggaagccattgag
ccggagagagaagagctccattcagccagcaaagacgcacctatgcaggctgctggagat
gaagaagctgggaacacggcatctgaatgcagcccgtccgctgatgacagtgtgtcatgc
ccgctgtgtgatcgaggctttccagccactgagattgagctgcacgccatgtactgtaac
ggcatcgtggcgcaggatgcaaatgaagatgttccagatgcctggagagcaggtctgcgg
cgctgcttgttggctccactcatcagaacgctagtttggaatgactgcagcagctactgg
caatctgcgctcactcagcgacagagagaaacaagaagtagagctggcagaggcagagat
gtcccgacccccatagacgttgacaagtgtgagaagtgctacctttgtaaggcccgggtg
ccgctggcagagtatccgaggcatgtggacagctgcctgcagactgcgagggacgctcag
ggaaaccggaggctgcgcagtgccaaggacgttgggcggagtgaaggcagactcctcagc
atgctggagatgtccgagtgcaagtctgcagatgctgatgctggggccatgctggcagca
ggaggagacccgaggcacaccccgtcgggggctgaggaggaagctgggtgcagcctggcc
cgggagagcccccttccacacctggctttcagtgacttgcccattccaccctatgtgtcc
gctcccgaagccgcaggctacgcggggggcttccagcagcaggtggcctgcagccagcag
cagaacaagggcagccggaggaggaggaggaaattctga
DBGET
integrated database retrieval system
