Caretta caretta (Loggerhead turtle): 125641377
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Entry
125641377 CDS
T09292
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125641377 (PATJ)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
DUF4548
Motif
Other DBs
NCBI-GeneID:
125641377
NCBI-ProteinID:
XP_048717181
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All DBs
Position
8:complement(91142433..91349812)
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AA seq
1886 aa
AA seq
DB search
MPENPAADKQQVLQILDRLQMKLRERGETSQNENLTILCNTLRSPLFNQILTLQQSIKQL
KEQLNYMPSDRSVDFDFTKRGLLVFDADRSIANGNVYMAYNSSGPRVDPLTPKLGADELN
MMIQRMAKGRQIEYIDIEKPSVGGLGFSVIALKNQTVGEAGIFVKEIQPGSIAARDQRLK
ENDHILAINRTPLDKSISHQQAIALLQQSTGSLHLVVARESVQRNSGPSAVLSDTNPPET
IQWGHVEEVELVNDGSGLGFGIVGGKSNGVVVRTVVPGGLADRDGRLRTGDHILQIGGTN
VQGMISEQVAQVLRNCGNSVRMVVARDPACEITVTPPTPVSLPVGALPFPPDRGTNTLFD
TYDVELTKKDGQSLGITIVGYTGTSDVADSSGIFVKNIIPGSAADHSGLIQVQDKIIAVD
GINVQDCSNQEVVESLRRTGQVVHLTLLRQKPPHASFSSGRSLERVQPNMPALVLSGAVE
TETNLDSETEEDQEDKDNFENEKKQNLHKIGRDPDTPEKELKSKWGKLLGSDYEVMVVRV
DVPITDDAELQKYSKLLPLHTLRLGVELDTFDGHHYISSIAPDGPIATLGLLQLEDELLE
VNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDGSESFVDELSTIEVSSPEPKMKPE
VDLLHPEEEGDGELALWSPDVKVIELEKDYKGLGFSILDYQDPLDPTRTAIVISSLVADG
VAERGGELLPGDRLVFVNEKYLDNATLAEAVEVLKSVPPGTIRLGICKPLVGESKEEENF
CIVDPSTIKDNSASPVNDINSSIMLEAPQGFRDETLFQEELVDEPLLDLGMPFLLPQNET
DHKESWEMHEFLKAKIEEIGEEREMLVDEEYDVDPDYFTYASSHVKDTTPPAGKNLVSIG
EWVKQLEPTKTPDLRSLISTNAKQSPHYLYDDEEMYEATMENNCQTAIFDDIEMTESIAK
SKLDLGTRLQNDSKRHKLVYLEAAERDEQKMEDYILSRNQETGRAVISTQLAAVLSSELP
EREEGEGEETPNFSHWGPPRNVEVFREPHMSLGISIVGGQTIIKRLKNGEELKGIFIKQV
LEDSPVGRTKALKTGDKILQVSGVDLQNATHEEAVEAIKNAGNPVIFVVQSLSSTPRVVS
VVQSKINKVKKDQDTESKNKNEKRKVGAPPPLKLPPPYKSPKTLQSEEDAVGEEDFYIEE
KIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFIVGINPDGPAGRDGRMHIG
DELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNEDAVNQMAVTPFPLPYSSQSSIE
DHSGTEHASSEEDCSSEVVMKSLTDDECIKTDVRNKADKQTLMVDQQDLVEQLPENVLNQ
LKQSKSSTKVPISLHEISLAPTPSYLSPETEFTSHSNVLQPLLPVDPATCPIVPGQEMTI
EISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNASH
EEAITALRQTPQKVQLVVYRDEAHYKEEENLEIFYVDLQKKTGRGLGLSIVGKRNGSGVF
VSDIVKGGAADLDGRLIQGDQILSVNGEDMRHASQEVVATILKCAQGLVHLEIGRLRAGS
WLSSRKTPQSSEVNQHSMHSHFYPALAPVITTLQNFVSTKRLSADASQRNSVGVDMDLRT
VEIMRGPNDALGISIAGGKGSPLGDVPIFIAMIQASGVAARTQRLKVGDRIVSINGQPLD
GLSHADAVNLLKNAYGSIILQVVADTNISAIASQLESMSAGCNLNSPTLDGHSEDPEAPQ
PKIIALEKGSDGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLKRGDQILAVNGEA
LEGVTHEQAVAILKCQKGSVTLTVLS
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatcctgcagcagataagcagcaggtgctacaaattcttgatcgactgcaa
atgaaactgcgagagagaggggagacttcacagaatgaaaacctgactattttatgtaac
acactcagaagccctttgtttaatcagatactgacccttcagcagtccatcaagcaactg
aaggagcaactcaattacatgccttcagaccgttcagtggactttgattttactaagaga
gggttactagtatttgatgctgacagatccattgctaatgggaatgtgtatatggcttat
aattcatctggacccagagtagatccactcactccaaaactaggagctgatgaattaaac
atgatgatccaacggatggcaaagggcaggcaaatagaatatatagatatagaaaaacca
tctgttggaggtcttggttttagtgtgattgcccttaaaaatcaaaccgtgggagaagct
ggtatctttgtcaaggaaatccagccaggaagcatagctgccagggatcaaagattaaag
gaaaatgaccacattctggccattaaccgcaccccgttggataagagcatttcccatcag
caggctattgcactgctccaacaatccacaggatctttacatctggttgttgctagagag
tcagtccaaagaaacagcggaccctctgctgtcttaagtgacacaaatccacctgagact
attcagtggggccatgttgaagaagttgaactggttaacgatggctcaggattaggtttt
ggaattgtaggaggaaaatcaaatggtgttgttgtaaggactgttgttccaggcggatta
gcagatcgggatgggagacttagaacaggagatcacatcttacagattggaggaaccaat
gtacaaggaatgatcagtgaacaagttgcccaagtgctgaggaactgtgggaattctgtt
aggatggtggttgcaagagatccagcatgtgagattactgtgaccccaccaacccctgtg
agcttgcctgttggtgcattaccctttcctccagacaggggtactaacactctttttgat
acctatgatgtggagcttacaaaaaaagatggacaaagccttggtataacaattgttgga
tatactggaacatctgatgtagcagattcttcagggatctttgtgaaaaatataatacct
ggcagtgctgcagatcacagtggccttatacaagtccaggacaaaattattgctgttgat
gggattaatgttcaggattgctccaaccaagaagtggtggagtcgctgcggcgcactggc
caggtggtgcaccttaccttgcttcgacagaaacctcctcatgcttctttctcttcagga
agatctttagagcgagtgcagccaaatatgccagccttagtcctgtctggagctgtagag
acagaaactaatttggatagtgagactgaggaggatcaagaggacaaagataactttgaa
aatgaaaagaagcaaaatctacacaaaataggaagagacccagacactccagaaaaggag
ttgaaatccaagtggggaaaactgctgggatctgattatgaagtcatggtggttcgtgta
gacgtgccaattacagatgatgctgagctccagaaatactcaaagctattgcctctccac
actttgagattaggagttgaacttgatacatttgatggacatcactacatatcttcaatt
gctccagatggtccaattgctacgcttggcctactgcaactggaggatgaacttctagag
gtaaatggagttcagctttatggaaaatcccgccgtgaggcagtttcttttctgaaagaa
gtgccgcctccgttcactctggtttgttgtcggcgcctgtttgatgatggcagcgaatcc
tttgtggatgagctcagcaccatcgaggtttcgtctccggagccaaagatgaaaccagaa
gtagaccttcttcatcctgaagaggaaggagatggtgaactagcattatggtctcctgat
gtgaaagttattgaactggaaaaagactataaaggcttaggattcagcattttagattat
caggatcccctagatccaacaagaacggccattgtgatcagctccctggtagcggatgga
gtagccgaacgcgggggtgaactgttaccaggcgaccgcctggtttttgtaaatgagaaa
tatttggacaatgccactctagcagaggcggtagaagtgttgaaatctgtgcccccaggt
actattcgccttggcatctgcaagcctttggtgggagaaagcaaagaggaggagaacttt
tgcattgtggatcccagcactattaaagacaactctgcatctccagtaaatgatattaat
tcatcaataatgcttgaggcaccacagggttttagagatgaaacgctctttcaagaagaa
cttgttgatgagccacttctggatttggggatgccgtttctgctacctcagaatgaaaca
gaccataaggagtcctgggaaatgcatgaattccttaaggctaaaatagaggaaattggt
gaagagcgggaaatgttagtggatgaagagtatgatgtggacccggattattttacatat
gcctcatcacatgtaaaggacacaactccacctgctgggaagaacctcgtttcgattgga
gaatgggtgaagcaacttgagccaactaaaacaccagatttaagatcccttattagcaca
aatgctaagcagtccccacattacctgtatgatgatgaagaaatgtatgaagccacaatg
gagaacaactgccaaacagccatatttgatgatattgaaatgactgagtccatagcaaaa
agcaaactggatttaggtacgaggcttcagaatgactcaaaaagacataagttagtttac
cttgaagcagctgaaagggatgaacaaaagatggaggattacattctttccaggaaccag
gaaactgggagagctgtcatttctactcagcttgcagcagtgttgtccagtgaattacct
gaacgagaagaaggagaaggagaagaaactccaaacttcagtcattggggaccaccccga
aatgttgaagtcttcagagaacctcacatgtctcttggaatcagtattgttggtggacaa
actattataaagcgcctaaagaatggagaggaacttaaaggtatctttatcaaacaagtg
ttggaagacagcccagttggaagaacaaaagccctaaaaactggggataaaatacttcag
gtgtctggagtagacttacaaaatgccacgcacgaggaagcagtggaagctatcaagaat
gcaggaaatcctgttatttttgttgttcagagtttgtctagtaccccaagagtggtatct
gtggtacagtctaagataaataaagtcaagaaagatcaggacacagaaagcaaaaacaaa
aatgagaagagaaaagtgggggcaccacctccgctgaagttgccgcctccttataaatca
cccaaaacactccagtcagaggaggatgctgtgggggaggaggatttttatatagaggag
aagatccgacaaagatatgcagatctgccaggggagttgcacattattgagcttgagaaa
gataagaatgggcttggactcagccttgctggcaacaaggacaggtctcgtatgagcatt
ttcatagttggcatcaatccagatggacctgcaggaagagatggaagaatgcacattggt
gatgaacttttagagataaacaatcagatattgtatggaagaagccaccaaaatgcctct
gcaataattaagactgctccgtcaaaggtcaagttggttttcatacgaaatgaagatgca
gttaaccaaatggctgttactcctttcccattaccttacagctcccagtcttccattgag
gatcacagtggcactgaacatgcaagcagtgaagaagattgcagctcagaagttgtcatg
aaaagcttgactgatgatgaatgtatcaaaacggatgtcagaaacaaagctgacaaacag
acgttgatggtagatcagcaggatttggtggagcaacttccagaaaatgtcctcaatcag
ttaaaacaatcaaagtcttcaaccaaagtacccatcagtttacatgagatatctttggca
ccaacaccttcttatctttctccagagacagagttcaccagccacagcaatgtactgcaa
cctctgttgccagtggatccagccacatgcccaattgttcctgggcaagagatgactata
gaaatatccaaggggcgatcaggccttggtctcagcattgttggagggaaagatactcca
cttgatgctatagttatacatgaagtttacgaagaaggggcagcagctagagatggccga
ctctgggctggtgatcagattcttgaggttaatggcgttgatttgaggaatgctagtcat
gaagaagctatcacagccttgagacagacacctcaaaaggtgcaactggttgtttataga
gatgaagctcattataaagaggaagagaatttggagattttctatgtggatctacaaaag
aaaacaggcagaggactaggtctaagcattgttggaaaacgaaatggaagtggagtgttt
gtctctgacattgttaaaggaggagctgcagacctggatgggagattaatacaaggagat
cagatcttgtctgttaatggggaggatatgagacatgcctcacaagaggttgttgccact
atcctcaagtgtgctcaagggctagtgcacctagagattggaagactgagagctggttct
tggttatcatcaaggaaaacaccccaaagcagtgaggtgaaccaacacagcatgcatagt
cacttttatcctgcactggctccagtcatcactaccttacagaactttgtcagcaccaag
aggctgtcggcagatgcatctcagagaaattcagtaggagtagatatggacctgagaact
gtggagataatgaggggaccaaatgatgcccttggtatcagtatagcaggagggaaggga
agcccattaggagatgttccaatctttatcgccatgattcaagccagtggagtagcagca
cgtacccaaaggctcaaagttggagatcggattgtcagtattaatgggcaacctttggat
gggctgtctcatgctgatgctgttaatctcctaaagaatgcttatgggagcattatcctg
caggttgtagccgacaccaatatcagtgccatagccagccaattagagagcatgtctgct
ggatgtaatcttaactcccctactcttgatggtcattctgaagatccagaggctcctcag
cctaagattattgctttggagaaaggttctgatggcctgggttttagtattgtgggggga
tatggaagtccccatggagacctgcccatttatgtcaagactatatttgccaagggagca
gctgcagatgatggcagattgaagcgtggcgatcagattttagcagttaatggagaagct
ttggaaggtgttactcatgagcaagctgtagctattctgaaatgccagaaaggatctgta
acattaacagtgttatcatga
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